EWM29713.1, cds958 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29713.1 vs. NCBI_GenBank
Match: gi|585112291|gb|EWM29713.1| (pantoate--beta-alanine ligase [Nannochloropsis gaditana]) HSP 1 Score: 387.111 bits (993), Expect = 3.608e-136 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0
Query: 1 MYTPSHRCYVVPEGFEHLAEGKSRPGHFKGVATIVTKLFGIVQPTKAYFGQKDAMQCVLMRRLVEDLNLPPAIVVCDTVREKDGLAMSSRNAYLSQHERSAAPVVYKSLRAAEQAFCNSETSISAAELRKIVRDVLAREELIHTVEYVSVARKDTMEELEDIVQPNEGAVISLAVRLGKVRLIDNVII 188
MYTPSHRCYVVPEGFEHLAEGKSRPGHFKGVATIVTKLFGIVQPTKAYFGQKDAMQCVLMRRLVEDLNLPPAIVVCDTVREKDGLAMSSRNAYLSQHERSAAPVVYKSLRAAEQAFCNSETSISAAELRKIVRDVLAREELIHTVEYVSVARKDTMEELEDIVQPNEGAVISLAVRLGKVRLIDNVII
Sbjct: 1 MYTPSHRCYVVPEGFEHLAEGKSRPGHFKGVATIVTKLFGIVQPTKAYFGQKDAMQCVLMRRLVEDLNLPPAIVVCDTVREKDGLAMSSRNAYLSQHERSAAPVVYKSLRAAEQAFCNSETSISAAELRKIVRDVLAREELIHTVEYVSVARKDTMEELEDIVQPNEGAVISLAVRLGKVRLIDNVII 188
BLAST of EWM29713.1 vs. NCBI_GenBank
Match: gi|1210522233|dbj|GAX18995.1| (pantoate--beta-alanine ligase [Fistulifera solaris]) HSP 1 Score: 230.335 bits (586), Expect = 8.393e-73 Identity = 114/188 (60.64%), Postives = 140/188 (74.47%), Query Frame = 0
Query: 1 MYTPSHRCYVVPEGFEHLAEGKSRPGHFKGVATIVTKLFGIVQPTKAYFGQKDAMQCVLMRRLVEDLNLPPAIVVCDTVREKDGLAMSSRNAYLSQHERSAAPVVYKSLRAAEQAFCNSETSISAAELRKIVRDVLAREELIHTVEYVSVARKDTMEELEDIVQPNEGAVISLAVRLGKVRLIDNVII 188
MY H YV PEGF+ +EGKSRPGHF+GVATIVTKLF IVQPT AYFGQKDA QCVL+RR+V+DLN+ ++V DTVRE DGLAMSSRN YL+ ER AAP+VY+SL AA SE+++ +A +R+ V VL E LI ++YVS+ K TM+ LE V +GA+ISLA +LG VRLIDN+II
Sbjct: 102 MYGKDHVTYVDPEGFDDTSEGKSRPGHFRGVATIVTKLFNIVQPTNAYFGQKDAAQCVLIRRIVDDLNMDVNVIVADTVRESDGLAMSSRNTYLTPTERRAAPIVYQSLCAARTLVLASESAVESAVVRETVESVLRSEPLISEIQYVSIDNKSTMQSLEQ-VNREDGALISLACKLGSVRLIDNIII 288
BLAST of EWM29713.1 vs. NCBI_GenBank
Match: gi|1210525877|dbj|GAX15483.1| (pantoate--beta-alanine ligase [Fistulifera solaris]) HSP 1 Score: 226.483 bits (576), Expect = 1.153e-71 Identity = 112/188 (59.57%), Postives = 138/188 (73.40%), Query Frame = 0
Query: 1 MYTPSHRCYVVPEGFEHLAEGKSRPGHFKGVATIVTKLFGIVQPTKAYFGQKDAMQCVLMRRLVEDLNLPPAIVVCDTVREKDGLAMSSRNAYLSQHERSAAPVVYKSLRAAEQAFCNSETSISAAELRKIVRDVLAREELIHTVEYVSVARKDTMEELEDIVQPNEGAVISLAVRLGKVRLIDNVII 188
MY H YV PEGF+ +EGK+RPGHF+GVATIVTKLF IVQPT AYFGQKDA QCVL+RR+V+DLN+ ++V +TVRE DGLAMSSRN YL+ ER AAP+VY+SL AA S ++ +A +RK V VL E LI ++YVS+ K TM+ LE V +GA+ISLA +LG VRLIDN+II
Sbjct: 69 MYGKDHVTYVDPEGFDDTSEGKARPGHFRGVATIVTKLFNIVQPTNAYFGQKDAAQCVLIRRIVDDLNMDVNVIVAETVRESDGLAMSSRNTYLTPTERHAAPIVYQSLCAARTLVLASNVAVESAVVRKTVESVLRSEPLISAIQYVSIDNKSTMQSLEQ-VNREDGALISLACKLGSVRLIDNIII 255
BLAST of EWM29713.1 vs. NCBI_GenBank
Match: gi|299117153|emb|CBN75117.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 216.853 bits (551), Expect = 1.199e-66 Identity = 111/191 (58.12%), Postives = 141/191 (73.82%), Query Frame = 0
Query: 1 MYTPSHRCYVVPEGFEHLAEGKSRPGHFKGVATIVTKLFGIVQPTKAYFGQKDAMQCVLMRRLVEDLNLPPAIVVCDTVREKDGLAMSSRNAYLSQHERSAAPVVYKSLRAAEQAF---CNSETSISAAELRKIVRDVLAREELIHTVEYVSVARKDTMEELEDIVQPNEGAVISLAVRLGKVRLIDNVII 188
MY+P HR YV P GF+ L EG +RPG F+GVAT+VTKL +VQP A+FGQKDA+QCVL++RLVEDLN+P +VV +T RE DGLAMSSRNAY+S ER+AAP VY SLRAA A ++ + S EL +V++ + LI +V+Y+SV TMEELE+I Q GAV+S+AVRLG VRLIDNV++
Sbjct: 158 MYSPDHRIYVDPLGFDDLPEGVARPGFFRGVATVVTKLLNVVQPDLAFFGQKDALQCVLVKRLVEDLNMPVTVVVSETTREADGLAMSSRNAYMSAEERAAAPAVYLSLRAAADARQREADAGRNASREELVAAAEEVISAQPLITSVDYLSVGSPATMEELEEIGQ--AGAVVSVAVRLGSVRLIDNVVL 346
BLAST of EWM29713.1 vs. NCBI_GenBank
Match: gi|695401061|ref|XP_009522673.1| (Pantoate-beta alanine ligase [Phytophthora sojae] >gi|348680140|gb|EGZ19956.1| Pantoate-beta alanine ligase [Phytophthora sojae]) HSP 1 Score: 210.305 bits (534), Expect = 5.337e-65 Identity = 103/192 (53.65%), Postives = 141/192 (73.44%), Query Frame = 0
Query: 1 MYTPSHRCYVVPEGFEHLAEGKSRPGHFKGVATIVTKLFGIVQPTKAYFGQKDAMQCVLMRRLVEDLNLPPAIVVCDTVREKDGLAMSSRNAYLSQHERSAAPVVYKSLRAA----EQAFCNSETSISAAELRKIVRDVLAREELIHTVEYVSVARKDTMEELEDIVQPNEGAVISLAVRLGKVRLIDNVII 188
MY+P HRCYV PEGF+ L EG+ R GHF+GVAT+V+KLF IVQPT A+FGQKDA Q VL++R+V DLN+P I V VRE DGLA+S+RN YLS ER AA V+++ L A +QA N +T++ AA LR +VR+ RE L+ ++Y+SV K+TM+E+ + V +G +IS+AV+LG+ RLIDN+++
Sbjct: 97 MYSPHHRCYVDPEGFDDLVEGQCREGHFRGVATVVSKLFNIVQPTHAFFGQKDAAQVVLIKRMVSDLNIPVEINVVPIVREADGLALSTRNQYLSPVEREAAAVLHRGLAHAQDLFQQAKQNGKTTVDAAALRDVVRNEYEREPLVTAIDYISVGSKETMQEVAE-VDTTKGVIISVAVKLGQCRLIDNIVL 287
BLAST of EWM29713.1 vs. NCBI_GenBank
Match: gi|224008352|ref|XP_002293135.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220971261|gb|EED89596.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 207.608 bits (527), Expect = 3.864e-64 Identity = 109/192 (56.77%), Postives = 137/192 (71.35%), Query Frame = 0
Query: 1 MYTPSHRCYVVPEGFEHLAEGKSRPGHFKGVATIVTKLFGIVQPTKAYFGQKDAMQCVLMRRLVEDLNLPPAIVVCDTVREKDGLAMSSRNAYLSQHERSAAPVVYKSLRAAEQAF----CNSETSISAAELRKIVRDVLAREELIHTVEYVSVARKDTMEELEDIVQPNEGAVISLAVRLGKVRLIDNVII 188
MY +H YV P GF+ EG SRPGHF+GVATIVTKLF IVQPT AYFGQKDA+QCVL+RR+ EDL++ + + DTVRE+DGLAMSSRNAYLS ER A VVYKSL AA + + ++A +LR++VR VL E LI V+YV+V +TM+ +E + N+G VISLA LG VRLIDN+++
Sbjct: 75 MYGKNHVTYVEPMGFDKTTEGISRPGHFRGVATIVTKLFNIVQPTNAYFGQKDAVQCVLIRRIAEDLDMDVNVQIMDTVREEDGLAMSSRNAYLSDEEREKAHVVYKSLCAAREVYESRLARGMEEVTADDLREVVRAVLETEPLITEVQYVAVDDLETMQPVERV--GNDGCVISLACILGPVRLIDNIVL 264
BLAST of EWM29713.1 vs. NCBI_GenBank
Match: gi|301106432|ref|XP_002902299.1| (pantoate beta-alanine ligase, putative [Phytophthora infestans T30-4] >gi|262098919|gb|EEY56971.1| pantoate beta-alanine ligase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 207.994 bits (528), Expect = 5.183e-64 Identity = 103/192 (53.65%), Postives = 139/192 (72.40%), Query Frame = 0
Query: 1 MYTPSHRCYVVPEGFEHLAEGKSRPGHFKGVATIVTKLFGIVQPTKAYFGQKDAMQCVLMRRLVEDLNLPPAIVVCDTVREKDGLAMSSRNAYLSQHERSAAPVVYKSLRAAEQAFC----NSETSISAAELRKIVRDVLAREELIHTVEYVSVARKDTMEELEDIVQPNEGAVISLAVRLGKVRLIDNVII 188
MY+P H CYV PEGF+ L EG+ R GHF+GVAT+VTKLF IVQPT A+FGQKDA Q VL++R+V DLN+P I V VRE DGLA+S+RN YLS ER A V+++ L A+ F + +++I+AA LR +VR R+ L++ ++YVSV K TM+EL + V EGA+IS+AV+LG+ RLIDN+++
Sbjct: 97 MYSPHHSCYVDPEGFDDLVEGRCRKGHFRGVATVVTKLFNIVQPTHAFFGQKDAAQVVLIKRMVSDLNIPVQINVVPIVREADGLALSTRNQYLSPVEREVASVLHRGLGHAQDLFQKAKKDGKSTINAAALRDVVRQEYERQPLVNAIDYVSVGSKQTMQELSE-VDTIEGAIISVAVKLGQCRLIDNIVL 287
BLAST of EWM29713.1 vs. NCBI_GenBank
Match: gi|1173959610|gb|OQS05825.1| (pantoate beta-alanine ligase [Thraustotheca clavata]) HSP 1 Score: 207.994 bits (528), Expect = 6.841e-64 Identity = 100/187 (53.48%), Postives = 137/187 (73.26%), Query Frame = 0
Query: 1 MYTPSHRCYVVPEGFEHLAEGKSRPGHFKGVATIVTKLFGIVQPTKAYFGQKDAMQCVLMRRLVEDLNLPPAIVVCDTVREKDGLAMSSRNAYLSQHERSAAPVVYKSLRAAEQAFCNSET-SISAAELRKIVRDVLAREELIHTVEYVSVARKDTMEELEDIVQPNEGAVISLAVRLGKVRLIDNV 186
MY P HR YV P GF+ + EGK RPG F+GVAT+VTKLF IV PT A+FGQKDA+QCV+++R++EDLN P + V T RE++GLAMS+RN YLS ER+A+ V+Y L++A+ F N+ T SI AA LR + + E L++ ++Y+S+A K+TM+EL D V GA+IS+AV++G RLIDN+
Sbjct: 116 MYLPEHRVYVDPVGFDDVPEGKCRPGFFRGVATVVTKLFNIVAPTHAFFGQKDAVQCVVIKRIIEDLNFPIELKVLKTKREENGLAMSTRNQYLSPAERTASAVIYAGLKSAQDLFKNATTSSIPAATLRDNIESIYRSEPLLNDIQYISIASKETMDELTD-VDTTAGAIISVAVKVGNCRLIDNI 301
BLAST of EWM29713.1 vs. NCBI_GenBank
Match: gi|1173944218|gb|OQR92979.1| (pantoate beta-alanine ligase [Achlya hypogyna]) HSP 1 Score: 207.223 bits (526), Expect = 2.037e-63 Identity = 104/189 (55.03%), Postives = 133/189 (70.37%), Query Frame = 0
Query: 1 MYTPSHRCYVVPEGFEHLAEGKSRPGHFKGVATIVTKLFGIVQPTKAYFGQKDAMQCVLMRRLVEDLNLPPAIVVCDTVREKDGLAMSSRNAYLSQHERSAAPVVYKSLRAAEQAF-CNSETSISAAELRKIVRDVLAREELIHTVEYVSVARKDTMEELEDIVQPNEGAVISLAVRLGKVRLIDNVII 188
MY P HR YV P GF+ + EG RPG F+GVAT+V KLF IV PT A+FGQKDA+QCV+++RL+EDLN P + V DT RE DGLAMS+RN YLS ERSAA V+Y LR A+ F +I AA LR + + E L+ ++Y+SV K+TMEEL++ V N GAVIS+AV +GK RLIDN+++
Sbjct: 121 MYLPDHRTYVDPTGFDDVPEGTCRPGFFRGVATVVAKLFNIVAPTHAFFGQKDAVQCVVIKRLIEDLNFPIDLRVLDTKREADGLAMSTRNQYLSPSERSAAKVLYAGLRQAKIDFDAAPGPTIPAAVLRATIETIYRAEPLVGEIQYISVGSKETMEELDE-VDTNAGAVISVAVTVGKCRLIDNIVL 308
BLAST of EWM29713.1 vs. NCBI_GenBank
Match: gi|970653294|gb|KUF91793.1| (hypothetical protein AM588_10007212 [Phytophthora nicotianae] >gi|970659978|gb|KUF97572.1| Pantothenate synthetase [Phytophthora nicotianae]) HSP 1 Score: 204.142 bits (518), Expect = 5.764e-63 Identity = 102/192 (53.12%), Postives = 135/192 (70.31%), Query Frame = 0
Query: 1 MYTPSHRCYVVPEGFEHLAEGKSRPGHFKGVATIVTKLFGIVQPTKAYFGQKDAMQCVLMRRLVEDLNLPPAIVVCDTVREKDGLAMSSRNAYLSQHERSAAPVVYKSLRAAEQAFC----NSETSISAAELRKIVRDVLAREELIHTVEYVSVARKDTMEELEDIVQPNEGAVISLAVRLGKVRLIDNVII 188
MY+P H CYV PEGF+ L EG+ R GHF+GVAT+VTKLF IVQPT A+FGQKDA Q VL++R+V DLN+P I V VRE DGLA+S+RN YLS ER AA V+++ L A+ F + ++ + A LR VR+ RE L+ +EYVSV K TM+E+ V EGA++S+AV+LG+ RLIDN+++
Sbjct: 69 MYSPYHSCYVDPEGFDDLVEGQCRKGHFRGVATVVTKLFNIVQPTHAFFGQKDAAQVVLIKRMVSDLNIPVQIEVMPIVREADGLALSTRNQYLSSVERKAASVLHRGLVHAQDLFQKAKKDGKSIVDAVSLRDAVREEYEREPLVTAIEYVSVGSKQTMQEMS-AVDTAEGAIVSVAVKLGQCRLIDNIVL 259 The following BLAST results are available for this feature:
BLAST of EWM29713.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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