EWM21133.1, cds9573 (CDS) Nannochloropsis gaditana

Overview
NameEWM21133.1
Unique Namecds9573
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:268097..269710 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21133.1
Productviolaxanthin de-epoxidase
Orig transcript idgnl|cribi|Naga_100041g46.3703.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:268097..269710 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0046422violaxanthin de-epoxidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0009507chloroplast
Vocabulary: INTERPRO
TermDefinition
IPR011038Calycin-like
IPR010788VDE
IPR012674Calycin
Homology
BLAST of EWM21133.1 vs. NCBI_GenBank
Match: gi|585101200|gb|EWM21133.1| (violaxanthin de-epoxidase [Nannochloropsis gaditana])

HSP 1 Score: 1110.9 bits (2872), Expect = 0.000e+0
Identity = 537/537 (100.00%), Postives = 537/537 (100.00%), Query Frame = 0
Query:    1 MGWTRRRIDHSCYSVPMCLVLAFVGVVVLLAAPARAFLPAPLSVSYSSLASAPCSPSAVTGRSRRPHMRAGPSEESGARRRPEERGLGPAPLEWWADPQATRRLLDPAAKERPVSGNQARSPGFWFKDVLSLQALKRRAFSLAVPVLLAVNWGSLFSGGMLHPPVAAAVDSIKVGTCLLKECQLELARCILDPKCLANVICLNTCNNKADEVGCQIGCGDLFENEVVGQFNACALSKKQCVPRKEDDGTYPVPPDSALVSSFDMNTFKGKWYISAGLNPLFDCFDCQVHFFTVQGDRLYGKLNWRITEPDGEFFTRDTVQRFVQDPRAPGKLYNHDNEYLHYQDDWYILDYEPNVFIAVYYRGQNDAWTGYGGGVVYTKQSSVPPEYKKRIAAAFAKANVDYARFKDVDNSCSDLKENPTALRAEFARRLFLTEEQQLQEALTTARVTAGNAIMMEEKEAQAAVKELERVISEFEGRVGKEVGREVENLEKELVKEVQQVERVIDTGLWRANNKPNLDSLAQRLEERPLADPRPAPK 537
            MGWTRRRIDHSCYSVPMCLVLAFVGVVVLLAAPARAFLPAPLSVSYSSLASAPCSPSAVTGRSRRPHMRAGPSEESGARRRPEERGLGPAPLEWWADPQATRRLLDPAAKERPVSGNQARSPGFWFKDVLSLQALKRRAFSLAVPVLLAVNWGSLFSGGMLHPPVAAAVDSIKVGTCLLKECQLELARCILDPKCLANVICLNTCNNKADEVGCQIGCGDLFENEVVGQFNACALSKKQCVPRKEDDGTYPVPPDSALVSSFDMNTFKGKWYISAGLNPLFDCFDCQVHFFTVQGDRLYGKLNWRITEPDGEFFTRDTVQRFVQDPRAPGKLYNHDNEYLHYQDDWYILDYEPNVFIAVYYRGQNDAWTGYGGGVVYTKQSSVPPEYKKRIAAAFAKANVDYARFKDVDNSCSDLKENPTALRAEFARRLFLTEEQQLQEALTTARVTAGNAIMMEEKEAQAAVKELERVISEFEGRVGKEVGREVENLEKELVKEVQQVERVIDTGLWRANNKPNLDSLAQRLEERPLADPRPAPK
Sbjct:    1 MGWTRRRIDHSCYSVPMCLVLAFVGVVVLLAAPARAFLPAPLSVSYSSLASAPCSPSAVTGRSRRPHMRAGPSEESGARRRPEERGLGPAPLEWWADPQATRRLLDPAAKERPVSGNQARSPGFWFKDVLSLQALKRRAFSLAVPVLLAVNWGSLFSGGMLHPPVAAAVDSIKVGTCLLKECQLELARCILDPKCLANVICLNTCNNKADEVGCQIGCGDLFENEVVGQFNACALSKKQCVPRKEDDGTYPVPPDSALVSSFDMNTFKGKWYISAGLNPLFDCFDCQVHFFTVQGDRLYGKLNWRITEPDGEFFTRDTVQRFVQDPRAPGKLYNHDNEYLHYQDDWYILDYEPNVFIAVYYRGQNDAWTGYGGGVVYTKQSSVPPEYKKRIAAAFAKANVDYARFKDVDNSCSDLKENPTALRAEFARRLFLTEEQQLQEALTTARVTAGNAIMMEEKEAQAAVKELERVISEFEGRVGKEVGREVENLEKELVKEVQQVERVIDTGLWRANNKPNLDSLAQRLEERPLADPRPAPK 537          
BLAST of EWM21133.1 vs. NCBI_GenBank
Match: gi|553181161|ref|XP_005853521.1| (violaxanthin de-epoxidase [Nannochloropsis gaditana CCMP526] >gi|422295539|gb|EKU22838.1| violaxanthin de-epoxidase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1069.69 bits (2765), Expect = 0.000e+0
Identity = 520/521 (99.81%), Postives = 520/521 (99.81%), Query Frame = 0
Query:   17 MCLVLAFVGVVVLLAAPARAFLPAPLSVSYSSLASAPCSPSAVTGRSRRPHMRAGPSEESGARRRPEERGLGPAPLEWWADPQATRRLLDPAAKERPVSGNQARSPGFWFKDVLSLQALKRRAFSLAVPVLLAVNWGSLFSGGMLHPPVAAAVDSIKVGTCLLKECQLELARCILDPKCLANVICLNTCNNKADEVGCQIGCGDLFENEVVGQFNACALSKKQCVPRKEDDGTYPVPPDSALVSSFDMNTFKGKWYISAGLNPLFDCFDCQVHFFTVQGDRLYGKLNWRITEPDGEFFTRDTVQRFVQDPRAPGKLYNHDNEYLHYQDDWYILDYEPNVFIAVYYRGQNDAWTGYGGGVVYTKQSSVPPEYKKRIAAAFAKANVDYARFKDVDNSCSDLKENPTALRAEFARRLFLTEEQQLQEALTTARVTAGNAIMMEEKEAQAAVKELERVISEFEGRVGKEVGREVENLEKELVKEVQQVERVIDTGLWRANNKPNLDSLAQRLEERPLADPRPAPK 537
            MCLVLAFVGVVVLLAAPARAFLPAPLSVSYSSLASAPCSPSAVTGRSRRPHMRAGPSEESGARRRPEERGLGPAPLEWWADPQATRRLLDPAAKERPVSGNQARSPGFWFKDVLSLQALKRRAFSLAVPVLLAVN GSLFSGGMLHPPVAAAVDSIKVGTCLLKECQLELARCILDPKCLANVICLNTCNNKADEVGCQIGCGDLFENEVVGQFNACALSKKQCVPRKEDDGTYPVPPDSALVSSFDMNTFKGKWYISAGLNPLFDCFDCQVHFFTVQGDRLYGKLNWRITEPDGEFFTRDTVQRFVQDPRAPGKLYNHDNEYLHYQDDWYILDYEPNVFIAVYYRGQNDAWTGYGGGVVYTKQSSVPPEYKKRIAAAFAKANVDYARFKDVDNSCSDLKENPTALRAEFARRLFLTEEQQLQEALTTARVTAGNAIMMEEKEAQAAVKELERVISEFEGRVGKEVGREVENLEKELVKEVQQVERVIDTGLWRANNKPNLDSLAQRLEERPLADPRPAPK
Sbjct:    1 MCLVLAFVGVVVLLAAPARAFLPAPLSVSYSSLASAPCSPSAVTGRSRRPHMRAGPSEESGARRRPEERGLGPAPLEWWADPQATRRLLDPAAKERPVSGNQARSPGFWFKDVLSLQALKRRAFSLAVPVLLAVNGGSLFSGGMLHPPVAAAVDSIKVGTCLLKECQLELARCILDPKCLANVICLNTCNNKADEVGCQIGCGDLFENEVVGQFNACALSKKQCVPRKEDDGTYPVPPDSALVSSFDMNTFKGKWYISAGLNPLFDCFDCQVHFFTVQGDRLYGKLNWRITEPDGEFFTRDTVQRFVQDPRAPGKLYNHDNEYLHYQDDWYILDYEPNVFIAVYYRGQNDAWTGYGGGVVYTKQSSVPPEYKKRIAAAFAKANVDYARFKDVDNSCSDLKENPTALRAEFARRLFLTEEQQLQEALTTARVTAGNAIMMEEKEAQAAVKELERVISEFEGRVGKEVGREVENLEKELVKEVQQVERVIDTGLWRANNKPNLDSLAQRLEERPLADPRPAPK 521          
BLAST of EWM21133.1 vs. NCBI_GenBank
Match: gi|1044604161|gb|ANT70525.1| (violaxanthin de-epoxidase [Nannochloropsis oceanica])

HSP 1 Score: 718.768 bits (1854), Expect = 0.000e+0
Identity = 348/466 (74.68%), Postives = 396/466 (84.98%), Query Frame = 0
Query:   93 EWWADPQATRRLLDPAAKERPVSGNQARSPG--------------------FWFKDVLSLQALKRRAFSLAVPVLLAVNWGSLFSGGMLHPPVAAAVDSIKVGTCLLKECQLELARCILDPKCLANVICLNTCNNKADEVGCQIGCGDLFENEVVGQFNACALSKKQCVPRKEDDGTYPVPPDSALVSSFDMNTFKGKWYISAGLNPLFDCFDCQVHFFTVQGDRLYGKLNWRITEPDGEFFTRDTVQRFVQDPRAPGKLYNHDNEYLHYQDDWYILDYEPNVFIAVYYRGQNDAWTGYGGGVVYTKQSSVPPEYKKRIAAAFAKANVDYARFKDVDNSCSDLKENPTALRAEFARRLFLTEEQQLQEALTTARVTAGNAIMMEEKEAQAAVKELERVISEFEGRVGKEVGREVENLEKELVKEVQQV-ERVIDTGLWRANNKPNLDSLAQRLEERPLADPRPAPK 537
            +WW DP+AT+RLLDPA+   P+S  +   P                     F F    S++  KR AFS+A+PVLL++N  SLF+GG+ HPPVAAAVDS+KVG CLL+ CQLELARCILDPKCLANVICLNTCNNKADEVGCQIGCGDLFENEVVGQFNACALSKKQCVPRKEDDG+YPVP DSALV SFD+N+FKGKWYISAGLNPLFD FDCQVHFFTVQGD+LYGKLNWRITEPDGEFFTRDTVQRFVQDP+ PGKLYNHDNEYLHYQDDWYILD+EP+ FIA++YRGQNDAWTGYGGGVVYT+  SVPP+YK+RI+AAFAKA VDYA+F+DVDN+CS+  +NPT LRAEFARRLFLTEEQQLQEALTTAR+TAGNAI+MEEKEAQAAVKELER I+ FE  V +EV ++V+ LE E +KEV++  E+VIDT LW+ NN+ NLDSLAQ+LE RPL DPRPAPK
Sbjct:   13 DWWKDPRATQRLLDPASA--PLSAAERVKPAAAASSCASSSSSSSSSSFDRFLFSASYSMRNFKRLAFSVALPVLLSINGDSLFAGGLPHPPVAAAVDSVKVGKCLLQNCQLELARCILDPKCLANVICLNTCNNKADEVGCQIGCGDLFENEVVGQFNACALSKKQCVPRKEDDGSYPVPADSALVPSFDINSFKGKWYISAGLNPLFDIFDCQVHFFTVQGDKLYGKLNWRITEPDGEFFTRDTVQRFVQDPKFPGKLYNHDNEYLHYQDDWYILDHEPDQFIAIFYRGQNDAWTGYGGGVVYTRGPSVPPKYKERISAAFAKAGVDYAKFQDVDNTCSEQSKNPTVLRAEFARRLFLTEEQQLQEALTTARITAGNAILMEEKEAQAAVKELERAINNFERGVEEEVIKDVKVLEGE-IKEVEKTFEKVIDTNLWKKNNQQNLDSLAQKLEGRPLVDPRPAPK 475          
BLAST of EWM21133.1 vs. NCBI_GenBank
Match: gi|873231371|emb|CEM08622.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 421.779 bits (1083), Expect = 9.742e-141
Identity = 203/365 (55.62%), Postives = 262/365 (71.78%), Query Frame = 0
Query:  130 LSLQALKRRAFSLAVPVLLAVNWGSLFSGGMLHPPVAAAVDSIKVGTCLLKECQLELARCILDPKCLANVICLNTCNNKADEVGCQIGCGDLFENEVVGQFNACALSKKQCVPRKEDDGTYPVPPDSALVSSFDMNTFKGKWYISAGLNPLFDCFDCQVHFFTVQG-DRLYGKLNWRITEPDGEFFTRDTVQRFVQDPRAPGKLYNHDNEYLHYQDDWYILDYEPNVFIAVYYRGQNDAWTGYGGGVVYTKQSSVPPEYKKRIAAAFAKANVDYARFKDVDNSCSDLKENPTALRAEFARRLFLTEEQQLQEALTTARVTAGNAIMMEEKEAQAAVKELERVISEFEGRVGKEVGREVENLEKEL 493
            LS Q++ + A  L VP+ L       F      P  A A D +KVGTCLL++C L+LA+C+L+P+C A+++CLN CNNK DE  CQ+ CG+LFENEVVG+FNACA+S K+CV +K DDG+YP  P  A    FD + FKG+WYISAGLNP+FD FDCQVHFF      R+YGKL WRITEPDGEFFTRDTVQRFVQ     G L+NHDNEYLHYQDDWYI+DYEP+ FIA+YYRG+NDAW GYGG VVY++ ++ P  +++RI+ AF+KA VD+ +F   DNSC  L ++P+ LRA++A++L L  E+ +QE LT+ R  A N ++ EEKE QAAV  LE  I ++E +      RE+E L + L
Sbjct:   49 LSWQSVLQSAMLLMVPLALP------FCAAPTMP--AFATDPVKVGTCLLQKCNLQLAQCLLNPRCAADIVCLNLCNNKPDEAECQVKCGNLFENEVVGKFNACAVSDKKCVDQKMDDGSYPDIPYEAFKHDFDTDLFKGRWYISAGLNPIFDIFDCQVHFFDAPSPGRIYGKLYWRITEPDGEFFTRDTVQRFVQQ-EDKGLLFNHDNEYLHYQDDWYIIDYEPDDFIAIYYRGRNDAWIGYGGAVVYSRDAAFPERHRERISNAFSKAGVDFQKFALTDNSCRPLDKSPSFLRAQYAKKLLLKAERNIQEELTSVRGYAANTLLREEKEFQAAVTNLETQIKDYENQFVFSAARELEELLRPL 404          
BLAST of EWM21133.1 vs. NCBI_GenBank
Match: gi|1210530377|dbj|GAX10961.1| (violaxanthin de-epoxidase [Fistulifera solaris])

HSP 1 Score: 372.474 bits (955), Expect = 1.250e-121
Identity = 190/386 (49.22%), Postives = 251/386 (65.03%), Query Frame = 0
Query:  135 LKRRAFSLAVPVLLAVNWGSLFSGGMLHPPVA-AAVDSIKVGTCLLKECQLELARCILDPKCLANVICLNTCNNKADEVGCQIGCGDLFENEVVGQFNACALSKKQCVPRKEDDGTYPVPPDSALVSSFDMNTFKGKWYISAGLNPLFDCFDCQVHFFTV-QGDRLYGKLNWRITEPDGEFFTRDTVQRFVQDPRAPGKLYNHDNEYLHYQDDWYILDYEPN-------VFIAVYYRGQNDAWTGYGGGVVYTKQSSVPPEYKKRIAAAFAKANVDYAR-FKDVDNSCS-DLK-ENPTALRAEFARRLFLTEEQQLQEALTTARVTAGNAIMMEEKEAQAAVKELERVISEFEGRVGKEVGREVENLEKELVKEVQQVERVIDTGL 508
            +K   F+L    L+A  W  L +     P VA AA DS  + +CL  +C++ LA+CI +P CLANV+C+NTCN K DE+GCQI CGD+FEN VVG+FN CA+S+  CVP+K+D+G YP+PP+  +V  F+   F+G+WYI+AG NPLFD F CQVHFFT  +    +G+LNWR+  PDGEFFTRD +QRFVQDP+ P  L NHDNEYLHY+DDWYI+D+E +        F  VYYRG NDAW GYGG V+YT+ S  P   + R+ AA  K N+D+ + F   DNSC  DL  +    LR +F     L  E+QLQ   T AR  A + I  EEK+A+ A++E  ++ +EFE     EV ++ E LEKEL K++  V+  I   L
Sbjct:   15 MKSSLFTLG---LIAATWIPLPASTPFGPQVAGAASDSANIVSCLFDKCKVPLAKCIANPMCLANVVCINTCNGKDDEIGCQIKCGDIFENSVVGEFNNCAVSQMSCVPQKQDEGLYPIPPEENVVPKFNTKLFRGRWYITAGQNPLFDIFPCQVHFFTEPEPGTFFGQLNWRVENPDGEFFTRDALQRFVQDPKQPAHLINHDNEYLHYKDDWYIIDFEYDDNKDGVPPFAFVYYRGSNDAWDGYGGAVIYTRDSKFPESLRPRLQAAAKKVNMDFDKDFTLTDNSCPVDLSPQEKLLLREKFLGDALLQTEKQLQVQATKARGNAVSLIKTEEKQAEKALEEFAKLTTEFEN----EVIKDAELLEKELEKDIGLVKTEIVNDL 393          
BLAST of EWM21133.1 vs. NCBI_GenBank
Match: gi|1210528315|dbj|GAX13004.1| (violaxanthin de-epoxidase [Fistulifera solaris])

HSP 1 Score: 371.318 bits (952), Expect = 1.758e-120
Identity = 188/385 (48.83%), Postives = 248/385 (64.42%), Query Frame = 0
Query:  135 LKRRAFSLAVPVLLAVNWGSLFSGGMLHPPVAAAVDSIKVGTCLLKECQLELARCILDPKCLANVICLNTCNNKADEVGCQIGCGDLFENEVVGQFNACALSKKQCVPRKEDDGTYPVPPDSALVSSFDMNTFKGKWYISAGLNPLFDCFDCQVHFFTV-QGDRLYGKLNWRITEPDGEFFTRDTVQRFVQDPRAPGKLYNHDNEYLHYQDDWYILDYEPN-------VFIAVYYRGQNDAWTGYGGGVVYTKQSSVPPEYKKRIAAAFAKANVDYAR-FKDVDNSCS-DLK-ENPTALRAEFARRLFLTEEQQLQEALTTARVTAGNAIMMEEKEAQAAVKELERVISEFEGRVGKEVGREVENLEKELVKEVQQVERVIDTGL 508
            +K   F+L    L+A  W  L S         AA DS  + +CL  +C++ LA+CI +P CLANV+C+NTCN K DE+GCQI CGD+FEN VVG+FN CA+S+  CVP+K+D+G YP+PP+  +V  F+   F+G+WYI+AG NPLFD F CQVHFFT  +    +G+LNWR+  PDGEFFTRD +QRFVQDP+ P  L NHDNEYLHY+DDWYI+D+E +        F  VYYRG NDAW GYGG V+YT+ S  P   + R+ AA  K N+D+ + F   DNSC  DL  +    LR +F     L  E+QLQ   T AR  A + I  EEK+A+ A++E  ++ +EFE     EV ++ E LEKEL K++  V+  I   L
Sbjct:   70 MKSSLFTLG---LIAATWMPLPSTPFGPQVAGAASDSANIVSCLFDKCKVPLAKCIANPMCLANVVCINTCNGKDDEIGCQIKCGDIFENSVVGEFNNCAVSQMSCVPQKQDEGFYPIPPEENVVPKFNTKLFRGRWYITAGQNPLFDIFPCQVHFFTEPEPGTFFGQLNWRVENPDGEFFTRDALQRFVQDPKQPAHLINHDNEYLHYKDDWYIIDFEYDDNKDGFPPFAFVYYRGSNDAWDGYGGAVIYTRDSKFPESLRPRLQAAAKKVNMDFDKDFTLTDNSCPVDLSPQEKLLLREKFLGDALLQTEKQLQVQATKARGNAVSLIKTEEKQAEKALEEFAKLTTEFEN----EVIKDAELLEKELEKDIGLVKTEIVNDL 447          
BLAST of EWM21133.1 vs. NCBI_GenBank
Match: gi|298711264|emb|CBJ26509.1| (violaxanthin de-epoxidase, chloroplast precursor [Ectocarpus siliculosus])

HSP 1 Score: 358.992 bits (920), Expect = 2.291e-116
Identity = 179/361 (49.58%), Postives = 231/361 (63.99%), Query Frame = 0
Query:  150 VNWGSLFSGGMLHPPVAAAVDSIKVGTCLLKECQLELARCILDPKCLANVICLNTCNNKADEVGCQIGCGDLFENEVVGQFNACALSKKQCVPRKEDDGTYPVPPDSALVSSFDMNTFKGKWYISAGLNPLFDCFDCQVHFFTV-QGDRLYGKLNWRITEPDGEFFTRDTVQRFVQDPRAPGKLYNHDNEYLHYQDDWYILDYEPNVFIAVYYRGQNDAWTGYGGGVVYTKQSSVPPEYKKRIAAAFAKANVDYARFKDVDNSCS-DLKENPTALRAEFARRLFLTEEQQLQEALTTARVTAGNAIMMEEKEAQAAVKELERVISEFEGRVGKEVGREVENLEKELVKEVQQVERVIDTGL 508
            V  G L S G +     +  ++ +VG CLL EC+  LA C+L+PKC AN+ICL TCN + DE  CQI CGDLFENE VG+FNACA+SKK CV +++DDG++PVPP  +   SF+    +G+WYISAGLNP FD FDCQVHFF   +  +L GKLNWRI EPDGEFFTRD VQ F QDP+ P  L N DNEYLHY+DDWYILD EPN  + V YRG NDAW GYGGG +YTK  +VPP   +R+ A    A + + R++  DN+C     E    LR ++A++L L+E +QLQE LT  R  A   +   E    + +++LE +  E+E         EVE L  +L    +   R+ + GL
Sbjct:   36 VGGGGLLSPGAMPAFAGSPEETKEVGICLLSECRGALASCLLNPKCFANIICLQTCNGRPDEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPPIESQAKSFNPKLMEGQWYISAGLNPAFDTFDCQVHFFNSPKPGKLVGKLNWRIKEPDGEFFTRDVVQTFDQDPKNPAHLVNKDNEYLHYRDDWYILDSEPNSHVLVVYRGSNDAWDGYGGGTLYTKDKTVPPGIVERVKAKSEAAGIKWERWQYNDNTCKPQTSETAELLREKYAKKLILSEGKQLQEQLTAVRGYAAQEVTEVE---SSTLEKLEDLKQEYE--------VEVEQLGTDLAAAFETELRLFEEGL 385          
BLAST of EWM21133.1 vs. NCBI_GenBank
Match: gi|224006239|ref|XP_002292080.1| (diadinoxanthin de-epoxidase [Thalassiosira pseudonana CCMP1335] >gi|220972599|gb|EED90931.1| diadinoxanthin de-epoxidase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 357.451 bits (916), Expect = 5.823e-115
Identity = 170/329 (51.67%), Postives = 216/329 (65.65%), Query Frame = 0
Query:  164 PVAAAVDSIKVGTCLLKECQLELARCILDPKCLANVICLNTCNNKADEVGCQIGCGDLFENEVVGQFNACALSKKQCVPRKEDDGTYPVPPDSALVSSFDMNTFKGKWYISAGLNPLFDCFDCQVHFFTVQG-DRLYGKLNWRITEPDGEFFTRDTVQRFVQDPRAPGKLYNHDNEYLHYQDDWYILDYEPNV-------FIAVYYRGQNDAWTGYGGGVVYTKQSSVPPEYKKRIAAAFAKANVDYAR-FKDVDNSCSDL-KENPTALRAEFARRLFLTEEQQLQEALTTARVTAGNAIMMEEKEAQAAVKELERVISEFEGRVGKEV 482
            P A A D  K+G CL+K+C++ LA+CI +P CLANVIC+N+CN K DE GCQI CG++FEN+VVG+FN CA++   CVP+K+DDG+YPVP    LV SFD   + G+W+I+AG N LFD F CQVHFFT     +  GKLNWRI EPDGEFFTRD VQ FVQDP  P  L NHDNEYLHYQDDWYI+DY  +        F  VYYRG+NDAW GYGG VVYT+ S +P     R+  A  K N D+ + F   DNSC  L K     LR +FA ++ +  E+QLQ+    AR  A N +  E    + +++++E     FE  + K+V
Sbjct:  101 PSANAADGAKIGLCLVKKCRVPLAKCITNPNCLANVICINSCNGKEDETGCQINCGNVFENDVVGEFNKCAVTDMTCVPQKKDDGSYPVPSKDVLVQSFDTKLWNGRWFITAGQNKLFDTFPCQVHFFTETAPGKFVGKLNWRIEEPDGEFFTRDAVQEFVQDPNNPAHLINHDNEYLHYQDDWYIVDYAADDNKEGVPPFAFVYYRGENDAWIGYGGAVVYTRDSKLPESLLPRLREAAKKVNFDFDKDFDLTDNSCKALEKGEEVVLREKFAGKMAIQTEKQLQQQAVLARTAASNTVKGEVTAVEKSLQKIEEKALAFEKELMKDV 429          
BLAST of EWM21133.1 vs. NCBI_GenBank
Match: gi|1072237270|gb|OEU21997.1| (Violaxanthin de-epoxidase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 344.354 bits (882), Expect = 4.771e-110
Identity = 180/381 (47.24%), Postives = 233/381 (61.15%), Query Frame = 0
Query:  132 LQALKRRAFSLAVPVLLAVNWGSLFSGGMLHPPVAAAVDSIKVGTCLLKECQLELARCILDPKCLANVICLNTCNNKADEVGCQIGCGDLFENEVVGQFNACALSKKQCVPRKEDDGTYPVPPDSALVSSFDMNTFKGKWYISAGLNPLFDCFDCQVHFFTVQG-DRLYGKLNWRITEPDGEFFTRDTVQRFVQDPRAPGKLYNHDNEYLHYQDDWYILDYEPNV-------FIAVYYRGQNDAWTGYGGGVVYTKQSSVPPEYKKRIAAAFAKANVDYAR-FKDVDNSCSDL-KENPTALRAEFARRLFLTEEQQLQEALTTARVTAGNAIMMEE-------KEAQAAVKELERVISEFEGRVGKEVGREVENLEKELVK 495
            +Q+LK+ A   A+ + L V  G+L +     P  A A DS  +  CL+ +CQ    +CI  P CLANV C+NTCN K DE+GCQI CGDLF+N V G+FN CA+S   CVP+++D+G YPVP    LV  FD + + G+WYI+AG NPLFD F CQVHFFT     + YGKLNWRI EPDGEFF RD VQ F+QDP+ P  L NHDNEYLHYQDDWYILDYEP+        F  VYYRG NDAW GYGG VVYT+++ +P     R+  A  K   D+ + F   DN+C  L  ++   L+ +FA ++ L  EQ L    T  R  A N+I  ++       K AQ A ++L + + +FE    +    +V+ LEK   K
Sbjct:   79 IQSLKQTAAVSALALGLTV--GALGTS----PLPAVASDSKAIVGCLVTKCQAPFLKCITSPLCLANVACINTCNGKEDEIGCQIKCGDLFDNPVTGEFNKCAVSDMNCVPQQKDEGLYPVPAPEILVPKFDTSLWNGRWYITAGQNPLFDIFPCQVHFFTETAPGKFYGKLNWRIEEPDGEFFNRDAVQEFIQDPKQPAHLVNHDNEYLHYQDDWYILDYEPDNNPTNTPPFAFVYYRGSNDAWDGYGGVVVYTREAKLPDSLLPRMREAAKKIGYDFDKDFAVTDNTCKSLDNQDSILLKEKFAGKVLLQTEQSLAAQATKFRGNAANSIKAQKIFFGNDSKSAQEAFEKLSKDVQKFE----ESFEDDVQKLEKSFTK 449          
BLAST of EWM21133.1 vs. NCBI_GenBank
Match: gi|1026758974|gb|OAE20993.1| (hypothetical protein AXG93_2024s1050 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 343.199 bits (879), Expect = 8.548e-109
Identity = 184/378 (48.68%), Postives = 233/378 (61.64%), Query Frame = 0
Query:  129 VLSLQALKRRAFSLAVPVLLAVNWGSLFSGGMLHPPVAAAVDSIKVGTCLLKECQLELARCILDPKCLANVICLNTCNNKADEVGCQIGCGDLFENEVVGQFNACALSKKQCVPRKEDDGTYPVPPDSALVSSFDMNTFKGKWYISAGLNPLFDCFDCQVHFFTVQGDRLYGKLNWRITEPDGEFFTRDTVQRFVQDPRAPGKLYNHDNEYLHYQDDWYILDYE----PNVFIAVYYRGQNDAWTGYGGGVVYTKQSSVPPEYKKRIAAAFAKANVDYARFKDVDNSCSDLKENPTALR----AEFARRLFLTEEQQLQEALTTARVTAGNAIMMEEKEAQAAVKELERVISEFEGRVGKEVGREVENLEKELVKEVQ 498
            +L+     R+ FS  V VL A+  G L  G     P A AVD++K  TCLLKEC++ELARCI DP C ANV CL TCNN+ DE  CQI CGDLFEN+VV QFN CA+S+K CVP+K D+GTYP+PP SALV  F    FKGKW+IS+GLN  FD FDCQ+H F+   + + GKL WRI+ PDG FFTR  VQ FVQD   PG L NH NE+LHYQDDWYILD +    P+ F+ VYYRG+NDAW GYGG V+YT+  ++P     R+ AA     +D+ +F   DN+C    E P   R     E      L E Q L++ +  A       +M+  K AQ   +E E++++     +GKE        EK L+ E+Q
Sbjct:  134 ILAFGNDARKNFS--VHVLGAMAVGLLVFG----IPSAQAVDALKTCTCLLKECRIELARCIADPGCAANVACLQTCNNRPDETECQIACGDLFENKVVDQFNDCAVSRKGCVPQKSDEGTYPIPPPSALVQDFKTKDFKGKWFISSGLNRTFDTFDCQLHEFSATRNTVTGKLTWRISTPDGGFFTRSAVQNFVQDESQPGILLNHGNEFLHYQDDWYILDSQIENKPDDFVFVYYRGKNDAWDGYGGSVIYTRSRTLPNSIIPRLTAAAKSVGLDFNKFTTTDNTCG--PEPPLFARLEKTIEKGEEAILREVQVLEQTVENA---GKQELMLLGKGAQELKREEEKLLA----GLGKE--------EKALLDELQ 488          
The following BLAST results are available for this feature:
BLAST of EWM21133.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101200|gb|EWM21133.1|0.000e+0100.00violaxanthin de-epoxidase [Nannochloropsis gaditan... [more]
gi|553181161|ref|XP_005853521.1|0.000e+099.81violaxanthin de-epoxidase [Nannochloropsis gaditan... [more]
gi|1044604161|gb|ANT70525.1|0.000e+074.68violaxanthin de-epoxidase [Nannochloropsis oceanic... [more]
gi|873231371|emb|CEM08622.1|9.742e-14155.62unnamed protein product [Vitrella brassicaformis C... [more]
gi|1210530377|dbj|GAX10961.1|1.250e-12149.22violaxanthin de-epoxidase [Fistulifera solaris][more]
gi|1210528315|dbj|GAX13004.1|1.758e-12048.83violaxanthin de-epoxidase [Fistulifera solaris][more]
gi|298711264|emb|CBJ26509.1|2.291e-11649.58violaxanthin de-epoxidase, chloroplast precursor [... [more]
gi|224006239|ref|XP_002292080.1|5.823e-11551.67diadinoxanthin de-epoxidase [Thalassiosira pseudon... [more]
gi|1072237270|gb|OEU21997.1|4.771e-11047.24Violaxanthin de-epoxidase [Fragilariopsis cylindru... [more]
gi|1026758974|gb|OAE20993.1|8.548e-10948.68hypothetical protein AXG93_2024s1050 [Marchantia p... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9604rna9604Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications