EWM21103.1, cds9569 (CDS) Nannochloropsis gaditana

Overview
NameEWM21103.1
Unique Namecds9569
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:261281..261790 -

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Properties
Property NameValue
Protein idEWM21103.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100041g43.3673.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:261281..261790 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21103.1 vs. NCBI_GenBank
Match: gi|585101169|gb|EWM21102.1| (hypothetical protein Naga_100041g43 [Nannochloropsis gaditana] >gi|585101170|gb|EWM21103.1| hypothetical protein Naga_100041g43 [Nannochloropsis gaditana])

HSP 1 Score: 349.362 bits (895), Expect = 6.920e-122
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 
Query:    1 MATVREMLTRFRFAEATSRECRDEERRKGALKQMWYIEASRRTRLTGDDDVTYSPLHVASRAIISALDTSMAGLRRRLHGHTNNSSSTSEPHTLHCACAPETKPTTKENGAGKTLSFYPSYQSANESTTSISSDINYSDCGSGALRQTGAAKYSLADAKKLLGSFRRNR 169
            MATVREMLTRFRFAEATSRECRDEERRKGALKQMWYIEASRRTRLTGDDDVTYSPLHVASRAIISALDTSMAGLRRRLHGHTNNSSSTSEPHTLHCACAPETKPTTKENGAGKTLSFYPSYQSANESTTSISSDINYSDCGSGALRQTGAAKYSLADAKKLLGSFRRNR
Sbjct:    1 MATVREMLTRFRFAEATSRECRDEERRKGALKQMWYIEASRRTRLTGDDDVTYSPLHVASRAIISALDTSMAGLRRRLHGHTNNSSSTSEPHTLHCACAPETKPTTKENGAGKTLSFYPSYQSANESTTSISSDINYSDCGSGALRQTGAAKYSLADAKKLLGSFRRNR 169
The following BLAST results are available for this feature:
BLAST of EWM21103.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101169|gb|EWM21102.1|6.920e-122100.00hypothetical protein Naga_100041g43 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9600rna9600Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications