EWM21111.1, cds9566 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21111.1 vs. NCBI_GenBank
Match: gi|585101178|gb|EWM21111.1| (dehydrogenase reductase sdr family member 12 [Nannochloropsis gaditana]) HSP 1 Score: 607.831 bits (1566), Expect = 0.000e+0 Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0 Query: 1 MRLVQYLVLLLLAIITSFIPAVTAFRIDIMISKFIGKHLPDYTYSVPGMLFYFLDPSHTSLGFKARSLCFDKEDLDVNLRGRVVLIAGGNAGIGRSAAQSLAELGATVHILCRSREKGERAVTDIQSVTGNKDVHLHVVDLSSLKQIQTFTNEFAASGKPLHVLINNAATMQSERMLTSEGFELAQATNLLGFYGLTRGLLPVLKLNAPSRIINVVSAGMLASQFKLKCLEEEENISPYDGAAVYSQHHRARVMLTEIWADELKHEKIVVNSVHPGWVDTPLLRSAGPMQGFYK 294 MRLVQYLVLLLLAIITSFIPAVTAFRIDIMISKFIGKHLPDYTYSVPGMLFYFLDPSHTSLGFKARSLCFDKEDLDVNLRGRVVLIAGGNAGIGRSAAQSLAELGATVHILCRSREKGERAVTDIQSVTGNKDVHLHVVDLSSLKQIQTFTNEFAASGKPLHVLINNAATMQSERMLTSEGFELAQATNLLGFYGLTRGLLPVLKLNAPSRIINVVSAGMLASQFKLKCLEEEENISPYDGAAVYSQHHRARVMLTEIWADELKHEKIVVNSVHPGWVDTPLLRSAGPMQGFYK Sbjct: 1 MRLVQYLVLLLLAIITSFIPAVTAFRIDIMISKFIGKHLPDYTYSVPGMLFYFLDPSHTSLGFKARSLCFDKEDLDVNLRGRVVLIAGGNAGIGRSAAQSLAELGATVHILCRSREKGERAVTDIQSVTGNKDVHLHVVDLSSLKQIQTFTNEFAASGKPLHVLINNAATMQSERMLTSEGFELAQATNLLGFYGLTRGLLPVLKLNAPSRIINVVSAGMLASQFKLKCLEEEENISPYDGAAVYSQHHRARVMLTEIWADELKHEKIVVNSVHPGWVDTPLLRSAGPMQGFYK 294
BLAST of EWM21111.1 vs. NCBI_GenBank
Match: gi|929281208|ref|XP_014017498.1| (PREDICTED: dehydrogenase/reductase SDR family member 12-like isoform X1 [Salmo salar]) HSP 1 Score: 205.682 bits (522), Expect = 6.187e-61 Identity = 101/236 (42.80%), Postives = 154/236 (65.25%), Query Frame = 0 Query: 59 TSLGFKARSLCFDKEDLDVNLRGRVVLIAGGNAGIGRSAAQSLAELGATVHILCRSREKGERAVTDIQSVTGNKDVHLHVVDLSSLKQIQTFTNEFAASGKPLHVLINNAATMQSERMLTSEGFELAQATNLLGFYGLTRGLLPVLKLNAPSRIINVVSAGMLASQFKLKCLEEEENISPYDGAAVYSQHHRARVMLTEIWADELKHEKIVVNSVHPGWVDTPLLRSAGPMQGFYK 294 T F + + F ++DL+V++ GRV +I G N+GIGR+ A ++A+ G TVH++CR+++K E A DI +GNK++++H++DLS +++ F F K L+VLINNA + SER + +EG E + ATN++G Y LTRGL+P+L+ +A R+I V S GML + + L+ E I YDG VY+QH R +V++TE WA H I + +HPGWVDTP++ A M F++ Sbjct: 23 TRSAFLSAAKHFVEKDLEVSMAGRVFMITGANSGIGRATAMAIAKRGGTVHMVCRNKDKAEEARADIVKESGNKEIYVHILDLSETRKVWEFAEAFKRKYKALNVLINNAGCIMSERDVNAEGLEKSFATNVMGVYILTRGLIPLLEKSAEPRVITVSSGGMLVQKLRTGNLQTE--IGRYDGTMVYAQHKRQQVVMTEQWAK--THSNIHFSVMHPGWVDTPVVAVANAMPDFHQ 254
BLAST of EWM21111.1 vs. NCBI_GenBank
Match: gi|641865133|gb|KDO83818.1| (hypothetical protein CISIN_1g019551mg [Citrus sinensis]) HSP 1 Score: 204.142 bits (518), Expect = 3.406e-60 Identity = 107/268 (39.93%), Postives = 164/268 (61.19%), Query Frame = 0 Query: 25 FRIDI---MISKFIGKHLPDYTYSVPGMLFYFLDPSHTSLGFKARSLCFDKEDLDVNLRGRVVLIAGGNAGIGRSAAQSLAELGATVHILCRSREKGERAVTDIQSVTGNKDVHLHVVDLSSLKQIQTFTNEFAASGKPLHVLINNAATMQSERMLTSEGFELAQATNLLGFYGLTRGLLPVLKLNAP-SRIINVVSAGMLASQFKLKCLEEEENISPYDGAAVYSQHHRARVMLTEIWADELKHEKIVVNSVHPGWVDTPLLRSAGP 288 FR+ I +S F+ K + V G + + T GFK S F ED+ + G+ ++ G NAGIG + A+ LA GATV+++CRS+EKGE A++ I+S TGN++VHL + DLSS+ +I++F N F+ KP+HVL+NNA +++ R++TSEGFEL A N+LG Y +T ++P+L+ AP +R+I V S GM + + E N +DG Y+++ R +V LTE W++ K + I S+HPGW +TP + + P Sbjct: 8 FRVQISPTQLSMFLLKKWRVAAFGVYGYMNF------TKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGVLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHL---TDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP 266
BLAST of EWM21111.1 vs. NCBI_GenBank
Match: gi|223648542|gb|ACN11029.1| (Dehydrogenase/reductase SDR family member 12 [Salmo salar]) HSP 1 Score: 203.371 bits (516), Expect = 3.936e-60 Identity = 100/230 (43.48%), Postives = 151/230 (65.65%), Query Frame = 0 Query: 59 TSLGFKARSLCFDKEDLDVNLRGRVVLIAGGNAGIGRSAAQSLAELGATVHILCRSREKGERAVTDIQSVTGNKDVHLHVVDLSSLKQIQTFTNEFAASGKPLHVLINNAATMQSERMLTSEGFELAQATNLLGFYGLTRGLLPVLKLNAPSRIINVVSAGMLASQFKLKCLEEEENISPYDGAAVYSQHHRARVMLTEIWADELKHEKIVVNSVHPGWVDTPLLRSAGP 288 T F + + F ++DL+V++ GRV +I G N+GIGR+ A ++A+ G TVH++CR+++K E A DI +GNK++++H++DLS +++ F F K L+VLINNA + SER + +EG E + ATN++G Y LTRGL+P+L+ +A R+I V S GML + + L+ E I YDG VY+QH R +V++TE WA H I + +HPGWVDTP + +A P Sbjct: 18 TRSAFLSAAKHFVEKDLEVSMAGRVFMITGANSGIGRATAMAIAKRGGTVHMVCRNKDKAEEARADIVKESGNKEIYVHILDLSETRKVWEFAEAFKRKYKALNVLINNAGCIMSERDVNAEGLEKSFATNVMGVYILTRGLIPLLEKSAEPRVITVSSGGMLVQKLRTGNLQTE--IGRYDGTMVYAQHKRQQVVMTEQWAK--THSNIHFSVMHPGWVDTPAVANAMP 243
BLAST of EWM21111.1 vs. NCBI_GenBank
Match: gi|929281210|ref|XP_014017499.1| (PREDICTED: dehydrogenase/reductase SDR family member 12-like isoform X2 [Salmo salar] >gi|209155934|gb|ACI34199.1| Dehydrogenase/reductase SDR family member 12 [Salmo salar]) HSP 1 Score: 203.371 bits (516), Expect = 4.536e-60 Identity = 100/230 (43.48%), Postives = 151/230 (65.65%), Query Frame = 0 Query: 59 TSLGFKARSLCFDKEDLDVNLRGRVVLIAGGNAGIGRSAAQSLAELGATVHILCRSREKGERAVTDIQSVTGNKDVHLHVVDLSSLKQIQTFTNEFAASGKPLHVLINNAATMQSERMLTSEGFELAQATNLLGFYGLTRGLLPVLKLNAPSRIINVVSAGMLASQFKLKCLEEEENISPYDGAAVYSQHHRARVMLTEIWADELKHEKIVVNSVHPGWVDTPLLRSAGP 288 T F + + F ++DL+V++ GRV +I G N+GIGR+ A ++A+ G TVH++CR+++K E A DI +GNK++++H++DLS +++ F F K L+VLINNA + SER + +EG E + ATN++G Y LTRGL+P+L+ +A R+I V S GML + + L+ E I YDG VY+QH R +V++TE WA H I + +HPGWVDTP + +A P Sbjct: 23 TRSAFLSAAKHFVEKDLEVSMAGRVFMITGANSGIGRATAMAIAKRGGTVHMVCRNKDKAEEARADIVKESGNKEIYVHILDLSETRKVWEFAEAFKRKYKALNVLINNAGCIMSERDVNAEGLEKSFATNVMGVYILTRGLIPLLEKSAEPRVITVSSGGMLVQKLRTGNLQTE--IGRYDGTMVYAQHKRQQVVMTEQWAK--THSNIHFSVMHPGWVDTPAVANAMP 248
BLAST of EWM21111.1 vs. NCBI_GenBank
Match: gi|567883957|ref|XP_006434537.1| (hypothetical protein CICLE_v10001743mg [Citrus clementina] >gi|557536659|gb|ESR47777.1| hypothetical protein CICLE_v10001743mg [Citrus clementina]) HSP 1 Score: 203.371 bits (516), Expect = 5.962e-60 Identity = 107/268 (39.93%), Postives = 164/268 (61.19%), Query Frame = 0 Query: 25 FRIDI---MISKFIGKHLPDYTYSVPGMLFYFLDPSHTSLGFKARSLCFDKEDLDVNLRGRVVLIAGGNAGIGRSAAQSLAELGATVHILCRSREKGERAVTDIQSVTGNKDVHLHVVDLSSLKQIQTFTNEFAASGKPLHVLINNAATMQSERMLTSEGFELAQATNLLGFYGLTRGLLPVLKLNAP-SRIINVVSAGMLASQFKLKCLEEEENISPYDGAAVYSQHHRARVMLTEIWADELKHEKIVVNSVHPGWVDTPLLRSAGP 288 FR+ I +S F+ K + V G + + T GFK S F ED+ + G+ ++ G NAGIG + A+ LA GATV+++CRS+EKGE A++ I+S TGN++VHL + DLSS+ +I++F N F+ KP+HVL+NNA +++ R++TSEGFEL A N+LG Y +T ++P+L+ AP +R+I V S GM + + E N +DG Y+++ R +V LTE W++ K + I S+HPGW +TP + + P Sbjct: 8 FRVQISPTQLSMFLLKKWRVAAFGVYGYMNF------TKNGFKEHSKNFKPEDMQARIEGKNCVVTGANAGIGYATAEGLASRGATVYMVCRSKEKGETALSAIRSKTGNENVHLELCDLSSITEIKSFANRFSLKNKPVHVLVNNAGLLENNRLITSEGFELNFAVNVLGTYTITESMVPLLEKAAPDARVITVSSGGMYTAHL---TDDLEFNSGSFDGMEQYARNKRVQVALTEKWSEMYKEKGIGFYSMHPGWAETPGVAKSMP 266
BLAST of EWM21111.1 vs. NCBI_GenBank
Match: gi|390362445|ref|XP_793972.3| (PREDICTED: dehydrogenase/reductase SDR family member 12 [Strongylocentrotus purpuratus]) HSP 1 Score: 202.986 bits (515), Expect = 1.005e-59 Identity = 99/227 (43.61%), Postives = 148/227 (65.20%), Query Frame = 0 Query: 62 GFKARSLCFDKEDLDVNLRGRVVLIAGGNAGIGRSAAQSLAELGATVHILCRSREKGERAVTDIQSVTGNKDVHLHVVDLSSLKQIQTFTNEFAASGKPLHVLINNAATMQSERMLTSEGFELAQATNLLGFYGLTRGLLPVLKLNAPSRIINVVSAGMLASQFKLKCLEEEENISPYDGAAVYSQHHRARVMLTEIWADELKHEKIVVNSVHPGWVDTPLLRSAGP 288 G++ + FDK LDV++ + LI G N+GIG+SAA ++A+ G TVH++CR++ +GE A +I++ TGN+ V LH+VD+S +++ F EFA SGK LHVL+NNA M +ER +TS G+E ATN LG Y LT L+PVL+ SR+I V S GM + L L+ E+ + +DG Y+ R +V++TE WA K+ +I ++HPGW DTP ++++ P Sbjct: 47 GYEHAAKSFDKAALDVDVSSQAFLITGANSGIGKSAALAVAQRGGTVHMICRNQTRGEEAKKEIETTTGNQKVFLHIVDMSDSQRVSDFAKEFAESGKELHVLVNNAGCMVNEREMTSAGYEFNFATNALGTYILTSHLIPVLQKAENSRVITVSSGGMYTQKLDLNNLQSEKTAT-FDGTMSYANQKRQQVIMTEQWAK--KYPEIKFFTMHPGWADTPAVQNSMP 270
BLAST of EWM21111.1 vs. NCBI_GenBank
Match: gi|1211318337|ref|XP_021438604.1| (dehydrogenase/reductase SDR family member 12-like isoform X1 [Oncorhynchus mykiss]) HSP 1 Score: 202.216 bits (513), Expect = 1.100e-59 Identity = 98/236 (41.53%), Postives = 154/236 (65.25%), Query Frame = 0 Query: 59 TSLGFKARSLCFDKEDLDVNLRGRVVLIAGGNAGIGRSAAQSLAELGATVHILCRSREKGERAVTDIQSVTGNKDVHLHVVDLSSLKQIQTFTNEFAASGKPLHVLINNAATMQSERMLTSEGFELAQATNLLGFYGLTRGLLPVLKLNAPSRIINVVSAGMLASQFKLKCLEEEENISPYDGAAVYSQHHRARVMLTEIWADELKHEKIVVNSVHPGWVDTPLLRSAGPMQGFYK 294 T F + + F ++DL+V++ GRV +I G N+GIGR+ A ++A+ G TVH++CR+++K E A DI +GNK++++H++DLS +++ F F K L+VLINNA + SER + +EG E + A+N++G Y LT+GL+P+L+ +A R+I V S GML + + L+ E I YDG VY+QH R +V++TE WA H + + +HPGWVDTP++ A M F++ Sbjct: 23 TRSAFLSAAKHFVEKDLEVSMAGRVFMITGANSGIGRATAMAIAKRGGTVHMVCRNKDKAEEARADIVKESGNKEIYVHILDLSETRKVWEFAEAFKRKYKALNVLINNAGCIMSERDVNAEGLEKSFASNVMGVYILTKGLIPLLEKSAEPRVITVSSGGMLVQKLRTGNLQTE--IGRYDGTMVYAQHKRQQVVMTEQWAK--THSNVHFSVMHPGWVDTPVVAVANAMPDFHQ 254
BLAST of EWM21111.1 vs. NCBI_GenBank
Match: gi|658836661|ref|XP_008430813.1| (PREDICTED: dehydrogenase/reductase SDR family member 12 [Poecilia reticulata]) HSP 1 Score: 201.445 bits (511), Expect = 1.916e-59 Identity = 100/231 (43.29%), Postives = 149/231 (64.50%), Query Frame = 0 Query: 58 HTSLGFKARSLCFDKEDLDVNLRGRVVLIAGGNAGIGRSAAQSLAELGATVHILCRSREKGERAVTDIQSVTGNKDVHLHVVDLSSLKQIQTFTNEFAASGKPLHVLINNAATMQSERMLTSEGFELAQATNLLGFYGLTRGLLPVLKLNAPSRIINVVSAGMLASQFKLKCLEEEENISPYDGAAVYSQHHRARVMLTEIWADELKHEKIVVNSVHPGWVDTPLLRSAGP 288 +T G++A + F DLDVNL R ++ G N+GIG++ AQ +A+ G TVH++CR++E+ E A DI + + N+++H+H+VD+SS +Q+ F F+ + K LHVLINNA M ++R LT EG E ATN LG Y LT L+P LK R+I V S GML + + L+ E+ +DG Y+Q+ R +V+LTE WA + H++I +S+HPGW DTP ++S+ P Sbjct: 17 YTKSGYEAAAKHFSPADLDVNLSDRCFMVTGANSGIGKATAQEIAKRGGTVHMVCRNKERAETAKGDIVAQSKNENIHVHIVDMSSARQVWEFAQSFSQNNK-LHVLINNAGCMVNQRELTEEGLEKNFATNTLGTYILTTALIPTLKKVEDPRVITVSSGGMLTQKLNVDDLQFEKGT--FDGTMAYAQNKRQQVILTERWASQ--HKEIHFSSMHPGWADTPAVQSSMP 242
BLAST of EWM21111.1 vs. NCBI_GenBank
Match: gi|1158843442|ref|XP_020330486.1| (dehydrogenase/reductase SDR family member 12-like [Oncorhynchus kisutch]) HSP 1 Score: 201.445 bits (511), Expect = 2.572e-59 Identity = 98/230 (42.61%), Postives = 151/230 (65.65%), Query Frame = 0 Query: 59 TSLGFKARSLCFDKEDLDVNLRGRVVLIAGGNAGIGRSAAQSLAELGATVHILCRSREKGERAVTDIQSVTGNKDVHLHVVDLSSLKQIQTFTNEFAASGKPLHVLINNAATMQSERMLTSEGFELAQATNLLGFYGLTRGLLPVLKLNAPSRIINVVSAGMLASQFKLKCLEEEENISPYDGAAVYSQHHRARVMLTEIWADELKHEKIVVNSVHPGWVDTPLLRSAGP 288 T F + + F ++DL+V++ GRV +I G N+GIGR+ A ++A+ G TVH++CR+++K E A DI +GNK++++H++DLS +++ F F K L+VLINNA + SER + +EG E + A+N++G Y LTRGL+P+L+ +A R+I V S GML + + L+ E I YDG VY+QH R +V++TE WA H + + +HPGWVDTP + +A P Sbjct: 23 TRSAFLSAAKHFVEKDLEVSMAGRVFMITGANSGIGRATAMAIAKRGGTVHMVCRNKDKAEEARADIVKESGNKEIYVHILDLSETRKVWEFAEAFKRKYKALNVLINNAGCIMSERDVNAEGLEKSFASNVMGVYILTRGLIPLLEKSAEPRVITVSSGGMLVQKLRTGNLQTE--IGRYDGTMVYAQHKRQQVVMTEQWAK--THSNVHFSVMHPGWVDTPAVANAMP 248 The following BLAST results are available for this feature:
BLAST of EWM21111.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|