EWM21105.1, cds9563 (CDS) Nannochloropsis gaditana

Overview
NameEWM21105.1
Unique Namecds9563
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:249456..251276 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21105.1
Productpoly -specific ribonuclease parn
Orig transcript idgnl|cribi|Naga_100041g35.3675.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:249456..251276 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
IPR006941RNase_CAF1
Homology
BLAST of EWM21105.1 vs. NCBI_GenBank
Match: gi|585101172|gb|EWM21105.1| (poly -specific ribonuclease parn [Nannochloropsis gaditana])

HSP 1 Score: 1261.13 bits (3262), Expect = 0.000e+0
Identity = 606/606 (100.00%), Postives = 606/606 (100.00%), Query Frame = 0
Query:    1 MTYKCRALQVILGLSGFATSSGVTSMYQNHVFSFIPVINGLPCGRSSHCNSISPRRAVVQSQYEEVSRLSFPDVLEKIRSIGKEAAFFSLDTEFTGYRQEERDEYFDTVQERYLKKKRVAERYLLVQMGLSAFVWDKALEDYKAFTWNIHLYPSKLQSERIFSCDASSLSFLRSHNLDFNLWVDGVPFLAIDQEASLRKQVEDQAEWDLKANAYAGKKPARSNFDPNADAETVELHRQLKEALDKLGPGAEPFLLPQNLSWFRKKMVQNTIGRHPRKANLWLEVIDPPAAEAGAGVGPTSTSLSAYNLEQLQVRYVDTEERIKCVQAKKSQALTDIEEAAGAMRILKVIKDSGRPLVGHNFFLDLLFLYTHFVKPTLPDTAMGFKAKVQHFFPSIYDTKVLAKSLGVTDEHGDTNLAGLYRKEGGGRVALEGVTGAAHEAGHDAFMTGVIFSSLLRRIKAKLSENISDCGTSPSPLSSPCSMPSLAYAENWSNKVFMRLTDVESFELRNFKQIPDRTRVFHVRTRCSGALPHLQHHQLRRAFSSLGSVQIKALGKHEAYVVFHDITRPPPEVSELKELVSSSGAEADEGLEIVTYEERRVALGILW 606
            MTYKCRALQVILGLSGFATSSGVTSMYQNHVFSFIPVINGLPCGRSSHCNSISPRRAVVQSQYEEVSRLSFPDVLEKIRSIGKEAAFFSLDTEFTGYRQEERDEYFDTVQERYLKKKRVAERYLLVQMGLSAFVWDKALEDYKAFTWNIHLYPSKLQSERIFSCDASSLSFLRSHNLDFNLWVDGVPFLAIDQEASLRKQVEDQAEWDLKANAYAGKKPARSNFDPNADAETVELHRQLKEALDKLGPGAEPFLLPQNLSWFRKKMVQNTIGRHPRKANLWLEVIDPPAAEAGAGVGPTSTSLSAYNLEQLQVRYVDTEERIKCVQAKKSQALTDIEEAAGAMRILKVIKDSGRPLVGHNFFLDLLFLYTHFVKPTLPDTAMGFKAKVQHFFPSIYDTKVLAKSLGVTDEHGDTNLAGLYRKEGGGRVALEGVTGAAHEAGHDAFMTGVIFSSLLRRIKAKLSENISDCGTSPSPLSSPCSMPSLAYAENWSNKVFMRLTDVESFELRNFKQIPDRTRVFHVRTRCSGALPHLQHHQLRRAFSSLGSVQIKALGKHEAYVVFHDITRPPPEVSELKELVSSSGAEADEGLEIVTYEERRVALGILW
Sbjct:    1 MTYKCRALQVILGLSGFATSSGVTSMYQNHVFSFIPVINGLPCGRSSHCNSISPRRAVVQSQYEEVSRLSFPDVLEKIRSIGKEAAFFSLDTEFTGYRQEERDEYFDTVQERYLKKKRVAERYLLVQMGLSAFVWDKALEDYKAFTWNIHLYPSKLQSERIFSCDASSLSFLRSHNLDFNLWVDGVPFLAIDQEASLRKQVEDQAEWDLKANAYAGKKPARSNFDPNADAETVELHRQLKEALDKLGPGAEPFLLPQNLSWFRKKMVQNTIGRHPRKANLWLEVIDPPAAEAGAGVGPTSTSLSAYNLEQLQVRYVDTEERIKCVQAKKSQALTDIEEAAGAMRILKVIKDSGRPLVGHNFFLDLLFLYTHFVKPTLPDTAMGFKAKVQHFFPSIYDTKVLAKSLGVTDEHGDTNLAGLYRKEGGGRVALEGVTGAAHEAGHDAFMTGVIFSSLLRRIKAKLSENISDCGTSPSPLSSPCSMPSLAYAENWSNKVFMRLTDVESFELRNFKQIPDRTRVFHVRTRCSGALPHLQHHQLRRAFSSLGSVQIKALGKHEAYVVFHDITRPPPEVSELKELVSSSGAEADEGLEIVTYEERRVALGILW 606          
BLAST of EWM21105.1 vs. NCBI_GenBank
Match: gi|695395402|ref|XP_009521153.1| (hypothetical protein PHYSODRAFT_540459 [Phytophthora sojae] >gi|348686050|gb|EGZ25865.1| hypothetical protein PHYSODRAFT_540459 [Phytophthora sojae])

HSP 1 Score: 182.956 bits (463), Expect = 1.801e-46
Identity = 160/553 (28.93%), Postives = 254/553 (45.93%), Query Frame = 0
Query:   87 FFSLDTEFTGY--RQEERDEYFDTVQERYLKKKRVAERYLLVQMGLSAFVWDKALEDYKAFTWNIHLYPSKLQS-ERIFSCDASSLSFLRSHNLDFNLWV-DGVPFLAIDQEASLRKQVEDQAEWDLKANAYAGKKPARSNFDPNADAETVELHRQLKEALDKLGPGA----EPFLLPQNLSWFRKKMVQNTIGRHPRKANLWLEVIDPPAAEAGAGVGPTSTSLSAYNLEQLQVRYVDTEERIKCVQAKKSQALTDIEEAAGAMRILKVIKDSGRPLVGHNFFLDLLFLYTHFVKPTLPDTAMGFKAKVQHFFPSIYDTKVLA---------KSLGV--------------------TDEHGDTNLAGLYRKEGGGRVALEGVTGAAHEAGHDAFMTGVIFSSLL-RRIKAKLSENISDCGTSPSPLSSPCSMPSLAYAENWSNKVFMRLTDVESFELRNFKQIPDRTRVFHVRTRCSGALPHLQHHQLRRAFSSLGSVQIKALGKHEAYVVFHDITRPPPEVSELKELVSSSGAEADEGLEIVTYEERRVA 601
            F ++DTEFTG    + ER++Y DT++ERY K KR  E +L+ Q GLS    D+  + ++  TWN +++P    S +  F C ASSL FL  H  DFN ++ DG+PF+ + +   ++K+++ + +   K N          N   + D   V   + + E LD+   G     E  L+P   S++   +V  T+    + + L+ E     AAE G                 ++V YV  + + + + AK      +++EA G  ++++ + +S  P+VGHN  LD ++++  F KP LP+T   FK ++   FP+IYDTK +          KS G+                    +DEH DT    L  +  G    L       HEAG DAFMT V F  LL    K +L +        P   SS      L   ++  N++ + ++D    +L N  Q  DRTRV+ V    S     +QH ++   F S    +I      +A+VV   +T P  EV++          +A+ G+ I TY+E   A
Sbjct:   65 FVAIDTEFTGLSPNEFEREQYLDTLEERYRKVKRAGESFLVTQFGLSTVHLDQK-DQFQIKTWNFYVFPRPYGSLDERFLCQASSLQFLSEHGFDFNKFIGDGIPFVNLAKTPVMKKRLQRRIDGLTKVN---------KNLQLSDDG--VAFQKDVNEQLDQWIAGGAKKGEKLLVPTRNSFY-SMVVHETV--RSKASYLYSE-----AAEGG-----------------VEVSYVSKKIKEELIAAKVKDMRREMDEAIGFSKVIEALSESKLPVVGHNALLDFVYVFHQFYKP-LPETLAEFKTQLLGLFPTIYDTKHVTLRSPLGDKLKSTGLSSLFEYMRENVKPEPESLIPSDEHFDTYRQALKAEADGNESLL------CHEAGFDAFMTAVCFLGLLAHDAKGELPDQ-----QVPKEGSSARLKVRLEELDSLKNQLNLMISDESFLDLGNVSQTIDRTRVYRV---SSTTKRRIQHVRMEDVFKSSKVQRIVRESDQDAFVV---LTEPAEEVND--------ETKAELGVNISTYDEHMAA 554          
BLAST of EWM21105.1 vs. NCBI_GenBank
Match: gi|970650563|gb|KUF89570.1| (hypothetical protein AM588_10002270 [Phytophthora nicotianae])

HSP 1 Score: 181.8 bits (460), Expect = 2.520e-46
Identity = 158/553 (28.57%), Postives = 257/553 (46.47%), Query Frame = 0
Query:   87 FFSLDTEFTGY--RQEERDEYFDTVQERYLKKKRVAERYLLVQMGLSAFVWDKALEDYKAFTWNIHLYPSKLQS-ERIFSCDASSLSFLRSHNLDFNLWV-DGVPFLAIDQEASLRKQVEDQAEWDLKANAYAGKKPARSNFDPNADAETVELHRQLKEALDKLGPGA----EPFLLPQNLSWFRKKMVQNTIGRHPRKANLWLEVIDPPAAEAGAGVGPTSTSLSAYNLEQLQVRYVDTEERIKCVQAKKSQALTDIEEAAGAMRILKVIKDSGRPLVGHNFFLDLLFLYTHFVKPTLPDTAMGFKAKVQHFFPSIYDTKVLA---------KSLGV--------------------TDEHGDTNLAGLYRKEGGGRVALEGVTGAAHEAGHDAFMTGVIFSSLL-RRIKAKLSENISDCGTSPSPLSSPCSMPSLAYAENWSNKVFMRLTDVESFELRNFKQIPDRTRVFHVRTRCSGALPHLQHHQLRRAFSSLGSVQIKALGKHEAYVVFHDITRPPPEVSELKELVSSSGAEADEGLEIVTYEERRVA 601
            F ++DTEFTG    + ER++Y DT++ERY K KR  E +L+ Q GLS    D+  + +   TWN +++P    S +  F C ASSL FL  H  DFN ++ DG+PF+ + +  +++K+++ + +   K N          N   + D   V    ++K+ LD+   G     +  L+P   S++   M+ +   R  + + L+ E     +AE G                 ++V YV  + + + + AK  +   ++E+A G  ++++ + +S  P+VGHN  LD ++++  F KP LP+T   FK ++   FP+IYDTK +          KS G+                    +DE  DT    L + E  G  +L       HEAG DAFMT V F  LL    K +L + +      P   SS      L   E++ N++ + ++D    +L N  Q  DRTRV+ V    S     +QH ++   F S    ++      +A+VV   +T P    +E+K          + GL I TY+E   A
Sbjct:   26 FIAIDTEFTGLSPNEFEREQYLDTLEERYHKVKRAGESFLITQFGLSTVHVDQK-DQFHIKTWNFYVFPRPYGSLDERFLCQASSLQFLSEHGFDFNKFIGDGIPFVNLSKTPAMKKRLQRRIDGLTKVN---------KNLQLSDDG--VAFQNEVKQQLDEWIAGGAKKGQKLLVPTRNSFY--SMIVHETAR-AKASYLYTE-----SAEGG-----------------VEVSYVSKKIKEELIAAKVKEMKKEMEDAIGFSKVIETLSESKLPVVGHNALLDFVYVFHQFYKP-LPETLAEFKTQLLELFPTIYDTKHVTLRSPLGEKLKSTGLSSLFEYMRENVKPEPESLIPSDERFDTYREAL-KAEADGNESL-----LCHEAGFDAFMTAVCFLGLLAHDAKGELPDQL-----VPKEGSSARLKVRLEELESFKNQLNLMVSDQSFLDLGNVDQTIDRTRVYRV---TSTTKRRIQHVRMEDVFQSSKVQRVVRESDQDAFVV---LTEPAAVNNEVK---------TELGLNITTYDEHVAA 514          
BLAST of EWM21105.1 vs. NCBI_GenBank
Match: gi|970634471|gb|KUF79686.1| (Poly(A)-specific ribonuclease PARN [Phytophthora nicotianae])

HSP 1 Score: 181.415 bits (459), Expect = 4.673e-46
Identity = 157/553 (28.39%), Postives = 255/553 (46.11%), Query Frame = 0
Query:   87 FFSLDTEFTGY--RQEERDEYFDTVQERYLKKKRVAERYLLVQMGLSAFVWDKALEDYKAFTWNIHLYPSKLQS-ERIFSCDASSLSFLRSHNLDFNLWV-DGVPFLAIDQEASLRKQVEDQAEWDLKANAYAGKKPARSNFDPNADAETVELHRQLKEALDKLGPGA----EPFLLPQNLSWFRKKMVQNTIGRHPRKANLWLEVIDPPAAEAGAGVGPTSTSLSAYNLEQLQVRYVDTEERIKCVQAKKSQALTDIEEAAGAMRILKVIKDSGRPLVGHNFFLDLLFLYTHFVKPTLPDTAMGFKAKVQHFFPSIYDTKVLA---------KSLGV--------------------TDEHGDTNLAGLYRKEGGGRVALEGVTGAAHEAGHDAFMTGVIFSSLL-RRIKAKLSENISDCGTSPSPLSSPCSMPSLAYAENWSNKVFMRLTDVESFELRNFKQIPDRTRVFHVRTRCSGALPHLQHHQLRRAFSSLGSVQIKALGKHEAYVVFHDITRPPPEVSELKELVSSSGAEADEGLEIVTYEERRVA 601
            F ++DTEFTG    + ER++Y DT++ERY K KR  E +L+ Q GLS    D+  + +   TWN +++P    S +  F C ASSL FL  H  DFN ++ DG+PF+ + +  +++K+++ + +   K N          N   + D   V    ++K+ LD+   G     +  L+P   S++   M+ +   R  + + L+ E     +AE G                 ++V YV  + + + + AK  +   ++E+A G  ++++ + +S  P+VGHN  LD ++++  F KP LP+T   FK ++   FP+IYDTK +          KS G+                    +DE  DT    L  +  G    L       HEAG DAFMT V F  LL    K +L + +      P   SS      L   E++ N++ + ++D    +L N  Q  DRTRV+ V    S     +QH ++   F S    ++      +A+VV   +T P    +E+K          + GL I TY+E   A
Sbjct:   58 FIAIDTEFTGLSPNEFEREQYLDTLEERYHKVKRAGESFLITQFGLSTVHVDQK-DQFHIKTWNFYVFPRPYGSLDERFLCQASSLQFLSEHGFDFNKFIGDGIPFVNLSKTPAMKKRLQRRIDGLTKVN---------KNLQLSDDG--VAFQNEVKQQLDEWIAGGAKKGQKLLVPTRNSFY--SMIVHETAR-AKASYLYTE-----SAEGG-----------------VEVSYVSKKIKEELIAAKVKEMKKEMEDAIGFSKVIETLSESKLPVVGHNALLDFVYVFHQFYKP-LPETLAEFKTQLLELFPTIYDTKHVTLRSPLGEKLKSTGLSSLFEYMRENVKPEPESLIPSDERFDTYREALKAEADGNESLL------CHEAGFDAFMTAVCFLGLLAHDAKGELPDQL-----VPKEGSSARLKVRLEELESFKNQLNLMVSDQSFLDLGNIDQTIDRTRVYRV---TSTTKRRIQHVRMEDVFQSSKVQRVVRESDQDAFVV---LTEPAAVNNEVK---------TELGLNITTYDEHVAA 546          
BLAST of EWM21105.1 vs. NCBI_GenBank
Match: gi|568008431|gb|ETL82650.1| (hypothetical protein L917_17220 [Phytophthora parasitica] >gi|568038369|gb|ETM35902.1| hypothetical protein L914_17282 [Phytophthora parasitica])

HSP 1 Score: 181.415 bits (459), Expect = 5.424e-46
Identity = 157/553 (28.39%), Postives = 255/553 (46.11%), Query Frame = 0
Query:   87 FFSLDTEFTGY--RQEERDEYFDTVQERYLKKKRVAERYLLVQMGLSAFVWDKALEDYKAFTWNIHLYPSKLQS-ERIFSCDASSLSFLRSHNLDFNLWV-DGVPFLAIDQEASLRKQVEDQAEWDLKANAYAGKKPARSNFDPNADAETVELHRQLKEALDKLGPGA----EPFLLPQNLSWFRKKMVQNTIGRHPRKANLWLEVIDPPAAEAGAGVGPTSTSLSAYNLEQLQVRYVDTEERIKCVQAKKSQALTDIEEAAGAMRILKVIKDSGRPLVGHNFFLDLLFLYTHFVKPTLPDTAMGFKAKVQHFFPSIYDTKVLA---------KSLGV--------------------TDEHGDTNLAGLYRKEGGGRVALEGVTGAAHEAGHDAFMTGVIFSSLL-RRIKAKLSENISDCGTSPSPLSSPCSMPSLAYAENWSNKVFMRLTDVESFELRNFKQIPDRTRVFHVRTRCSGALPHLQHHQLRRAFSSLGSVQIKALGKHEAYVVFHDITRPPPEVSELKELVSSSGAEADEGLEIVTYEERRVA 601
            F ++DTEFTG    + ER++Y DT++ERY K KR  E +L+ Q GLS    D+  + +   TWN +++P    S +  F C ASSL FL  H  DFN ++ DG+PF+ + +  +++K+++ + +   K N          N   + D   V    ++K+ LD+   G     +  L+P   S++   M+ +   R  + + L+ E     +AE G                 ++V YV  + + + + AK  +   ++E+A G  ++++ + +S  P+VGHN  LD ++++  F KP LP+T   FK ++   FP+IYDTK +          KS G+                    +DE  DT    L  +  G    L       HEAG DAFMT V F  LL    K +L + +      P   SS      L   E++ N++ + ++D    +L N  Q  DRTRV+ V    S     +QH ++   F S    ++      +A+VV   +T P    +E+K          + GL I TY+E   A
Sbjct:   58 FIAIDTEFTGLSPNEFEREQYLDTLEERYHKVKRAGESFLITQFGLSTVHVDQK-DQFHIKTWNFYVFPRPYGSLDERFLCQASSLQFLSEHGFDFNKFIGDGIPFVNLSKTPAMKKRLQRRIDGLTKVN---------KNLQLSDDG--VAFQNEVKQQLDEWIAGGAKKGQKLLVPTRNSFY--SMIVHETAR-AKASYLYTE-----SAEGG-----------------VEVSYVSKKIKEELIAAKVKEMKKEMEDAIGFSKVIETLSESKLPVVGHNALLDFVYVFHQFYKP-LPETLAEFKTQLLELFPTIYDTKHVTLRSPLGEKLKSTGLSSLFEYMRENVKPEPESLIPSDERFDTYREALKAEADGNESLL------CHEAGFDAFMTAVCFLGLLAHDAKGELPDQL-----VPKEGSSARLKVRLEELESFKNQLNLMVSDQSFLDLGNVDQTIDRTRVYRV---TSTTKRRIQHVRMEDVFQSSKVQRVVRESDQDAFVV---LTEPAAVNNEVK---------TELGLNITTYDEHVAA 546          
BLAST of EWM21105.1 vs. NCBI_GenBank
Match: gi|970665641|gb|KUG02236.1| (Poly(A)-specific ribonuclease PARN [Phytophthora nicotianae])

HSP 1 Score: 181.415 bits (459), Expect = 5.814e-46
Identity = 157/553 (28.39%), Postives = 255/553 (46.11%), Query Frame = 0
Query:   87 FFSLDTEFTGY--RQEERDEYFDTVQERYLKKKRVAERYLLVQMGLSAFVWDKALEDYKAFTWNIHLYPSKLQS-ERIFSCDASSLSFLRSHNLDFNLWV-DGVPFLAIDQEASLRKQVEDQAEWDLKANAYAGKKPARSNFDPNADAETVELHRQLKEALDKLGPGA----EPFLLPQNLSWFRKKMVQNTIGRHPRKANLWLEVIDPPAAEAGAGVGPTSTSLSAYNLEQLQVRYVDTEERIKCVQAKKSQALTDIEEAAGAMRILKVIKDSGRPLVGHNFFLDLLFLYTHFVKPTLPDTAMGFKAKVQHFFPSIYDTKVLA---------KSLGV--------------------TDEHGDTNLAGLYRKEGGGRVALEGVTGAAHEAGHDAFMTGVIFSSLL-RRIKAKLSENISDCGTSPSPLSSPCSMPSLAYAENWSNKVFMRLTDVESFELRNFKQIPDRTRVFHVRTRCSGALPHLQHHQLRRAFSSLGSVQIKALGKHEAYVVFHDITRPPPEVSELKELVSSSGAEADEGLEIVTYEERRVA 601
            F ++DTEFTG    + ER++Y DT++ERY K KR  E +L+ Q GLS    D+  + +   TWN +++P    S +  F C ASSL FL  H  DFN ++ DG+PF+ + +  +++K+++ + +   K N          N   + D   V    ++K+ LD+   G     +  L+P   S++   M+ +   R  + + L+ E     +AE G                 ++V YV  + + + + AK  +   ++E+A G  ++++ + +S  P+VGHN  LD ++++  F KP LP+T   FK ++   FP+IYDTK +          KS G+                    +DE  DT    L  +  G    L       HEAG DAFMT V F  LL    K +L + +      P   SS      L   E++ N++ + ++D    +L N  Q  DRTRV+ V    S     +QH ++   F S    ++      +A+VV   +T P    +E+K          + GL I TY+E   A
Sbjct:   58 FVAIDTEFTGLSPNEFEREQYLDTLEERYHKVKRAGESFLITQFGLSTVHVDQK-DQFHIKTWNFYVFPRPYGSLDERFLCQASSLQFLSEHGFDFNKFIGDGIPFVNLSKTPAMKKRLQRRIDGLTKVN---------KNLQLSDDG--VAFQNEVKQQLDEWIAGGAKKGQKLLVPTRNSFY--SMIVHETAR-AKASYLYTE-----SAEGG-----------------VEVSYVSKKIKEELIAAKVKEMKKEMEDAIGFSKVIETLSESKLPVVGHNALLDFVYVFHQFYKP-LPETLAEFKTQLLELFPTIYDTKHVTLRSPLGEKLKSTGLSSLFEYMRENVKPEPESLIPSDERFDTYREALKAEADGNESLL------CHEAGFDAFMTAVCFLGLLAHDAKGELPDQL-----VPKEGSSARLKVRLEELESFKNQLNLMVSDQSFLDLGNIDQTIDRTRVYRV---TSTTKRRIQHVRMEDVFQSSKVQRVVRESDQDAFVV---LTEPAAVNNEVK---------TELGLNITTYDEHVAA 546          
BLAST of EWM21105.1 vs. NCBI_GenBank
Match: gi|675175199|ref|XP_008896484.1| (hypothetical protein PPTG_04345 [Phytophthora parasitica INRA-310] >gi|568104223|gb|ETN18880.1| hypothetical protein PPTG_04345 [Phytophthora parasitica INRA-310])

HSP 1 Score: 181.03 bits (458), Expect = 6.422e-46
Identity = 157/553 (28.39%), Postives = 255/553 (46.11%), Query Frame = 0
Query:   87 FFSLDTEFTGY--RQEERDEYFDTVQERYLKKKRVAERYLLVQMGLSAFVWDKALEDYKAFTWNIHLYPSKLQS-ERIFSCDASSLSFLRSHNLDFNLWV-DGVPFLAIDQEASLRKQVEDQAEWDLKANAYAGKKPARSNFDPNADAETVELHRQLKEALDKLGPGA----EPFLLPQNLSWFRKKMVQNTIGRHPRKANLWLEVIDPPAAEAGAGVGPTSTSLSAYNLEQLQVRYVDTEERIKCVQAKKSQALTDIEEAAGAMRILKVIKDSGRPLVGHNFFLDLLFLYTHFVKPTLPDTAMGFKAKVQHFFPSIYDTKVLA---------KSLGV--------------------TDEHGDTNLAGLYRKEGGGRVALEGVTGAAHEAGHDAFMTGVIFSSLL-RRIKAKLSENISDCGTSPSPLSSPCSMPSLAYAENWSNKVFMRLTDVESFELRNFKQIPDRTRVFHVRTRCSGALPHLQHHQLRRAFSSLGSVQIKALGKHEAYVVFHDITRPPPEVSELKELVSSSGAEADEGLEIVTYEERRVA 601
            F ++DTEFTG    + ER++Y DT++ERY K KR  E +L+ Q GLS    D+  + +   TWN +++P    S +  F C ASSL FL  H  DFN ++ DG+PF+ + +  +++K+++ + +   K N          N   + D   V    ++K+ LD+   G     +  L+P   S++   M+ +   R  + + L+ E     +AE G                 ++V YV  + + + + AK  +   ++E+A G  ++++ + +S  P+VGHN  LD ++++  F KP LP+T   FK ++   FP+IYDTK +          KS G+                    +DE  DT    L  +  G    L       HEAG DAFMT V F  LL    K +L + +      P   SS      L   E++ N++ + ++D    +L N  Q  DRTRV+ V    S     +QH ++   F S    ++      +A+VV   +T P    +E+K          + GL I TY+E   A
Sbjct:   58 FIAIDTEFTGLSPNEFEREQYLDTLEERYHKVKRAGESFLITQFGLSTVHVDQK-DQFHIKTWNFYVFPRPYGSLDERFLCQASSLQFLSEHGFDFNKFIGDGIPFVNLSKTPAMKKRLQRRIDGLTKVN---------KNLQLSDDG--VAFQNEVKQQLDEWIAGGAKKGQKLLVPTRNSFY--SMIVHETAR-AKASYLYTE-----SAEGG-----------------VEVSYVSKKIKEELIAAKVKEMKKEMEDAIGFSKVIETLSESKLPVVGHNALLDFVYVFHQFYKP-LPETLAEFKTQLLELFPTIYDTKHVTLRSPLGEKLKSTGLSSLFEYMRENVKPEPESLIPSDERFDTYREALKAEADGNESLL------CHEAGFDAFMTAVCFLGLLAHDAKGELPDQL-----VPKEGSSARLKVRLEELESFKNQLNLMVSDQSFLDLGNVDQTIDRTRVYRV---TSTTKRRIQHVRMEDVFQSSKVQRVVRESDQDAFVV---LTEPAAVNNEVK---------TELGLNITTYDEHVAA 546          
BLAST of EWM21105.1 vs. NCBI_GenBank
Match: gi|570970560|gb|ETP33679.1| (hypothetical protein F442_17814 [Phytophthora parasitica P10297])

HSP 1 Score: 181.03 bits (458), Expect = 6.486e-46
Identity = 157/553 (28.39%), Postives = 255/553 (46.11%), Query Frame = 0
Query:   87 FFSLDTEFTGY--RQEERDEYFDTVQERYLKKKRVAERYLLVQMGLSAFVWDKALEDYKAFTWNIHLYPSKLQS-ERIFSCDASSLSFLRSHNLDFNLWV-DGVPFLAIDQEASLRKQVEDQAEWDLKANAYAGKKPARSNFDPNADAETVELHRQLKEALDKLGPGA----EPFLLPQNLSWFRKKMVQNTIGRHPRKANLWLEVIDPPAAEAGAGVGPTSTSLSAYNLEQLQVRYVDTEERIKCVQAKKSQALTDIEEAAGAMRILKVIKDSGRPLVGHNFFLDLLFLYTHFVKPTLPDTAMGFKAKVQHFFPSIYDTKVLA---------KSLGV--------------------TDEHGDTNLAGLYRKEGGGRVALEGVTGAAHEAGHDAFMTGVIFSSLL-RRIKAKLSENISDCGTSPSPLSSPCSMPSLAYAENWSNKVFMRLTDVESFELRNFKQIPDRTRVFHVRTRCSGALPHLQHHQLRRAFSSLGSVQIKALGKHEAYVVFHDITRPPPEVSELKELVSSSGAEADEGLEIVTYEERRVA 601
            F ++DTEFTG    + ER++Y DT++ERY K KR  E +L+ Q GLS    D+  + +   TWN +++P    S +  F C ASSL FL  H  DFN ++ DG+PF+ + +  +++K+++ + +   K N          N   + D   V    ++K+ LD+   G     +  L+P   S++   M+ +   R  + + L+ E     +AE G                 ++V YV  + + + + AK  +   ++E+A G  ++++ + +S  P+VGHN  LD ++++  F KP LP+T   FK ++   FP+IYDTK +          KS G+                    +DE  DT    L  +  G    L       HEAG DAFMT V F  LL    K +L + +      P   SS      L   E++ N++ + ++D    +L N  Q  DRTRV+ V    S     +QH ++   F S    ++      +A+VV   +T P    +E+K          + GL I TY+E   A
Sbjct:   58 FVAIDTEFTGLSPNEFEREQYLDTLEERYHKVKRAGESFLITQFGLSTVHVDQK-DQFHIKTWNFYVFPRPYGSLDERFLCQASSLQFLSEHGFDFNKFIGDGIPFVNLSKTPAMKKRLQRRIDGLTKVN---------KNLQLSDDG--VAFQNEVKQQLDEWIAGGAKKGQKLLVPTRNSFY--SMIVHETAR-AKASYLYTE-----SAEGG-----------------VEVSYVSKKIKEELIAAKVKEMKKEMEDAIGFSKVIETLSESKLPVVGHNALLDFVYVFHQFYKP-LPETLAEFKTQLLELFPTIYDTKHVTLRSPLGEKLKSTGLSSLFEYMRENVKPEPESLIPSDERFDTYREALKAEADGNESLL------CHEAGFDAFMTAVCFLGLLAHDAKGELPDQL-----VPKEGSSARLKVRLEELESFKNQLNLMVSDQSFLDLGNVDQTIDRTRVYRV---TSTTKRRIQHVRMEDVFQSSKVQRVVRESDQDAFVV---LTEPAAVNNEVK---------TELGLNITTYDEHVAA 546          
BLAST of EWM21105.1 vs. NCBI_GenBank
Match: gi|566012841|gb|ETI35752.1| (hypothetical protein F443_17972 [Phytophthora parasitica P1569] >gi|570316494|gb|ETO64442.1| hypothetical protein F444_17997 [Phytophthora parasitica P1976])

HSP 1 Score: 181.03 bits (458), Expect = 6.953e-46
Identity = 157/553 (28.39%), Postives = 255/553 (46.11%), Query Frame = 0
Query:   87 FFSLDTEFTGY--RQEERDEYFDTVQERYLKKKRVAERYLLVQMGLSAFVWDKALEDYKAFTWNIHLYPSKLQS-ERIFSCDASSLSFLRSHNLDFNLWV-DGVPFLAIDQEASLRKQVEDQAEWDLKANAYAGKKPARSNFDPNADAETVELHRQLKEALDKLGPGA----EPFLLPQNLSWFRKKMVQNTIGRHPRKANLWLEVIDPPAAEAGAGVGPTSTSLSAYNLEQLQVRYVDTEERIKCVQAKKSQALTDIEEAAGAMRILKVIKDSGRPLVGHNFFLDLLFLYTHFVKPTLPDTAMGFKAKVQHFFPSIYDTKVLA---------KSLGV--------------------TDEHGDTNLAGLYRKEGGGRVALEGVTGAAHEAGHDAFMTGVIFSSLL-RRIKAKLSENISDCGTSPSPLSSPCSMPSLAYAENWSNKVFMRLTDVESFELRNFKQIPDRTRVFHVRTRCSGALPHLQHHQLRRAFSSLGSVQIKALGKHEAYVVFHDITRPPPEVSELKELVSSSGAEADEGLEIVTYEERRVA 601
            F ++DTEFTG    + ER++Y DT++ERY K KR  E +L+ Q GLS    D+  + +   TWN +++P    S +  F C ASSL FL  H  DFN ++ DG+PF+ + +  +++K+++ + +   K N          N   + D   V    ++K+ LD+   G     +  L+P   S++   M+ +   R  + + L+ E     +AE G                 ++V YV  + + + + AK  +   ++E+A G  ++++ + +S  P+VGHN  LD ++++  F KP LP+T   FK ++   FP+IYDTK +          KS G+                    +DE  DT    L  +  G    L       HEAG DAFMT V F  LL    K +L + +      P   SS      L   E++ N++ + ++D    +L N  Q  DRTRV+ V    S     +QH ++   F S    ++      +A+VV   +T P    +E+K          + GL I TY+E   A
Sbjct:   58 FVAIDTEFTGLSPNEFEREQYLDTLEERYHKVKRAGESFLITQFGLSTVHVDQK-DQFHIKTWNFYVFPRPYGSLDERFLCQASSLQFLSEHGFDFNKFIGDGIPFVNLSKTPAMKKRLQRRIDGLTKVN---------KNLQLSDDG--VAFQNEVKQQLDEWIAGGAKKGQKLLVPTRNSFY--SMIVHETAR-AKASYLYTE-----SAEGG-----------------VEVSYVSKKIKEELIAAKVKEMKKEMEDAIGFSKVIETLSESKLPVVGHNALLDFVYVFHQFYKP-LPETLAEFKTQLLELFPAIYDTKHVTLRSPLGEKLKSTGLSSLFEYMRENVKPEPESLIPSDERFDTYREALKAEADGNESLL------CHEAGFDAFMTAVCFLGLLAHDAKGELPDQL-----VPKEGSSARLKVRLEELESFKNQLNLMVSDQSFLDLGNVDQTIDRTRVYRV---TSTTKRRIQHVRMEDVFQSSKVQRVVRESDQDAFVV---LTEPAAVNNEVK---------TELGLNITTYDEHVAA 546          
BLAST of EWM21105.1 vs. NCBI_GenBank
Match: gi|567950256|gb|ETK75973.1| (hypothetical protein L915_17489 [Phytophthora parasitica] >gi|567978936|gb|ETL29421.1| hypothetical protein L916_17382 [Phytophthora parasitica] >gi|570940290|gb|ETP05547.1| hypothetical protein F441_17840 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 181.03 bits (458), Expect = 7.679e-46
Identity = 157/553 (28.39%), Postives = 255/553 (46.11%), Query Frame = 0
Query:   87 FFSLDTEFTGY--RQEERDEYFDTVQERYLKKKRVAERYLLVQMGLSAFVWDKALEDYKAFTWNIHLYPSKLQS-ERIFSCDASSLSFLRSHNLDFNLWV-DGVPFLAIDQEASLRKQVEDQAEWDLKANAYAGKKPARSNFDPNADAETVELHRQLKEALDKLGPGA----EPFLLPQNLSWFRKKMVQNTIGRHPRKANLWLEVIDPPAAEAGAGVGPTSTSLSAYNLEQLQVRYVDTEERIKCVQAKKSQALTDIEEAAGAMRILKVIKDSGRPLVGHNFFLDLLFLYTHFVKPTLPDTAMGFKAKVQHFFPSIYDTKVLA---------KSLGV--------------------TDEHGDTNLAGLYRKEGGGRVALEGVTGAAHEAGHDAFMTGVIFSSLL-RRIKAKLSENISDCGTSPSPLSSPCSMPSLAYAENWSNKVFMRLTDVESFELRNFKQIPDRTRVFHVRTRCSGALPHLQHHQLRRAFSSLGSVQIKALGKHEAYVVFHDITRPPPEVSELKELVSSSGAEADEGLEIVTYEERRVA 601
            F ++DTEFTG    + ER++Y DT++ERY K KR  E +L+ Q GLS    D+  + +   TWN +++P    S +  F C ASSL FL  H  DFN ++ DG+PF+ + +  +++K+++ + +   K N          N   + D   V    ++K+ LD+   G     +  L+P   S++   M+ +   R  + + L+ E     +AE G                 ++V YV  + + + + AK  +   ++E+A G  ++++ + +S  P+VGHN  LD ++++  F KP LP+T   FK ++   FP+IYDTK +          KS G+                    +DE  DT    L  +  G    L       HEAG DAFMT V F  LL    K +L + +      P   SS      L   E++ N++ + ++D    +L N  Q  DRTRV+ V    S     +QH ++   F S    ++      +A+VV   +T P    +E+K          + GL I TY+E   A
Sbjct:   58 FVAIDTEFTGLSPNEFEREQYLDTLEERYHKVKRAGESFLITQFGLSTVHVDQK-DQFHIKTWNFYVFPRPYGSLDERFLCQASSLQFLSEHGFDFNKFIGDGIPFVNLSKTPAMKKRLQRRIDGLTKVN---------KNLQLSDDG--VAFQNEVKQQLDEWIAGGAKKGQKLLVPTRNSFY--SMIVHETAR-AKASYLYTE-----SAEGG-----------------VEVSYVSKKIKEELIAAKVKEMKKEMEDAIGFSKVIETLSESKLPVVGHNALLDFVYVFHQFYKP-LPETLAEFKTQLLELFPTIYDTKHVTLRSPLGEKLKSTGLSSLFEYMRENVKPEPESLIPSDERFDTYREALKAEADGNESLL------CHEAGFDAFMTAVCFLGLLAHDAKGELPDQL-----VPKEGSSARLKVRLEELESFKNQLNLMVSDQSFLDLGNVDQTIDRTRVYRV---TSTTKRRIQHVRMEDVFQSSKVQRVVRESDQDAFVV---LTEPAAVNNEVK---------TELGLNITTYDEHVAA 546          
The following BLAST results are available for this feature:
BLAST of EWM21105.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101172|gb|EWM21105.1|0.000e+0100.00poly -specific ribonuclease parn [Nannochloropsis ... [more]
gi|695395402|ref|XP_009521153.1|1.801e-4628.93hypothetical protein PHYSODRAFT_540459 [Phytophtho... [more]
gi|970650563|gb|KUF89570.1|2.520e-4628.57hypothetical protein AM588_10002270 [Phytophthora ... [more]
gi|970634471|gb|KUF79686.1|4.673e-4628.39Poly(A)-specific ribonuclease PARN [Phytophthora n... [more]
gi|568008431|gb|ETL82650.1|5.424e-4628.39hypothetical protein L917_17220 [Phytophthora para... [more]
gi|970665641|gb|KUG02236.1|5.814e-4628.39Poly(A)-specific ribonuclease PARN [Phytophthora n... [more]
gi|675175199|ref|XP_008896484.1|6.422e-4628.39hypothetical protein PPTG_04345 [Phytophthora para... [more]
gi|570970560|gb|ETP33679.1|6.486e-4628.39hypothetical protein F442_17814 [Phytophthora para... [more]
gi|566012841|gb|ETI35752.1|6.953e-4628.39hypothetical protein F443_17972 [Phytophthora para... [more]
gi|567950256|gb|ETK75973.1|7.679e-4628.39hypothetical protein L915_17489 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9594rna9594Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications