EWM21098.1, cds9562 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21098.1 vs. NCBI_GenBank
Match: gi|585101165|gb|EWM21098.1| (methyltransferase type 11 [Nannochloropsis gaditana]) HSP 1 Score: 755.362 bits (1949), Expect = 0.000e+0 Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0 Query: 1 MTTKYKCNTKSRALVFPGSDLEIMAEEEDQVGVAGSCSQRTQIGIATSPSHSLHDWHALPLADRPRLVDVRSEEAFQARRLVSSINLPIDDLVNLLFELPEPSVGLAIVATNLEEGENAVKLLDSRYWHCIPFIFVEDESEENSVLWRSAATLRLLTSGQISPQDRRIIYTPNPFLVSHIDFVEESLAETHLVSSSQSFYTCCDVGCGAGRDSVWLAKRGRGWLVRCVDRLPRCLDRVQRLACRHGVSNLIECETSLVRGARVHSSSTSPSFETRKYDLVLAIRFFEREFLTSLGEMVRPGGGFLLLVSFVAREDGVAYEHPKDPKKVLLAGELVQVFGTGGMGFETVENCSQILPDGRVMSAYLARRL 369 MTTKYKCNTKSRALVFPGSDLEIMAEEEDQVGVAGSCSQRTQIGIATSPSHSLHDWHALPLADRPRLVDVRSEEAFQARRLVSSINLPIDDLVNLLFELPEPSVGLAIVATNLEEGENAVKLLDSRYWHCIPFIFVEDESEENSVLWRSAATLRLLTSGQISPQDRRIIYTPNPFLVSHIDFVEESLAETHLVSSSQSFYTCCDVGCGAGRDSVWLAKRGRGWLVRCVDRLPRCLDRVQRLACRHGVSNLIECETSLVRGARVHSSSTSPSFETRKYDLVLAIRFFEREFLTSLGEMVRPGGGFLLLVSFVAREDGVAYEHPKDPKKVLLAGELVQVFGTGGMGFETVENCSQILPDGRVMSAYLARRL Sbjct: 1 MTTKYKCNTKSRALVFPGSDLEIMAEEEDQVGVAGSCSQRTQIGIATSPSHSLHDWHALPLADRPRLVDVRSEEAFQARRLVSSINLPIDDLVNLLFELPEPSVGLAIVATNLEEGENAVKLLDSRYWHCIPFIFVEDESEENSVLWRSAATLRLLTSGQISPQDRRIIYTPNPFLVSHIDFVEESLAETHLVSSSQSFYTCCDVGCGAGRDSVWLAKRGRGWLVRCVDRLPRCLDRVQRLACRHGVSNLIECETSLVRGARVHSSSTSPSFETRKYDLVLAIRFFEREFLTSLGEMVRPGGGFLLLVSFVAREDGVAYEHPKDPKKVLLAGELVQVFGTGGMGFETVENCSQILPDGRVMSAYLARRL 369
BLAST of EWM21098.1 vs. NCBI_GenBank
Match: gi|553195875|ref|XP_005856223.1| (methyltransferase type 12, partial [Nannochloropsis gaditana CCMP526] >gi|422292838|gb|EKU20140.1| methyltransferase type 12, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 293.893 bits (751), Expect = 5.025e-97 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0 Query: 147 WRSAATLRLLTSGQISPQDRRIIYTPNPFLVSHIDFVEESLAETHLVSSSQSFYTCCDVGCGAGRDSVWLAKRGRGWLVRCVDRLPRCLDRVQRLACRHGVSNLIECETSLVRGARVHSSSTSPSFETRKYDLVLAIRFFER 288 WRSAATLRLLTSGQISPQDRRIIYTPNPFLVSHIDFVEESLAETHLVSSSQSFYTCCDVGCGAGRDSVWLAKRGRGWLVRCVDRLPRCLDRVQRLACRHGVSNLIECETSLVRGARVHSSSTSPSFETRKYDLVLAIRFFER Sbjct: 1 WRSAATLRLLTSGQISPQDRRIIYTPNPFLVSHIDFVEESLAETHLVSSSQSFYTCCDVGCGAGRDSVWLAKRGRGWLVRCVDRLPRCLDRVQRLACRHGVSNLIECETSLVRGARVHSSSTSPSFETRKYDLVLAIRFFER 142
BLAST of EWM21098.1 vs. NCBI_GenBank
Match: gi|595494453|gb|EXX77079.1| (hypothetical protein RirG_027160 [Rhizophagus irregularis DAOM 197198w]) HSP 1 Score: 149.443 bits (376), Expect = 3.427e-38 Identity = 120/365 (32.88%), Postives = 179/365 (49.04%), Query Frame = 0 Query: 46 ATSPSHSLHDWHALPLADRPRLVDVRSEEAFQARRLVSSINLPIDDLVNLLFELPEPSVGLAIVATNLEEGENA---VKLLDSRYWHCIPFIFVEDESEENSVLWRSAATLRLLTSGQISPQD------RRIIYTPNPFLVSHIDFVEESLAETHLVSSSQSFYTCCDVGCGAGRDSVWLAKRGR-GWLVRCVDRLPRCLDRVQRLACRHGVSNLIE-------CETSLVRGARVHSSSTS--------------PSFE----------TRKYDLVLAIRFFEREFLTSLGEMVRPGGGFLLLVSFVAREDGV-AYEHPKDPKKVLLAGELVQVFGTGGMGFETVENCSQILPDGRVMSAYLARR 368 SP +L+ W + + + L+D R RR++ S+ +P DL LFELP S+ A+ LE +NA KLL + W+ +P+IFVE E LW + L +L P + + ++ P+PFLV ID +EESL HL SS C D+ CG GRD+ WL+ R W V VD + LDR ++LA V I+ + S+ R SS TS P F+ ++YDLV++IRF REFL+++ +V+P GFLL+ +FV DG Y++P+ L GEL F GFE + + +++ DGR ++++LAR+ Sbjct: 4 VNSPKSTLYHW--INNSSKKLLLDFRPLHKHYTRRIIPSVCIPFTDLKKHLFELPSKSLPFAV----LEPHDNAGITQKLLIDQGWN-VPWIFVEGEE-----LWEVSRELGILEEIDDGPNNEFKNRLKWTLFQPSPFLVRTIDRIEESLK--HL--SSNHVVNCLDIACGNGRDAAWLSSRQTIDWRVTAVDAMSVALDRTRQLASDLDVLFKIQTFHAKIMVDGSVKRYQESLSSQTSMKDGDGASEMIKTRPKFDNIPEKEIEFLNKEYDLVISIRFLRREFLSNMASLVKP-RGFLLISTFV--NDGRHTYKNPRSNSHRLELGELATKFRK---GFEIINDEIELIEDGRPVNSFLARK 346
BLAST of EWM21098.1 vs. NCBI_GenBank
Match: gi|552926633|gb|ESA10536.1| (hypothetical protein GLOINDRAFT_97266 [Rhizophagus irregularis DAOM 181602]) HSP 1 Score: 150.599 bits (379), Expect = 5.375e-37 Identity = 120/365 (32.88%), Postives = 179/365 (49.04%), Query Frame = 0 Query: 46 ATSPSHSLHDWHALPLADRPRLVDVRSEEAFQARRLVSSINLPIDDLVNLLFELPEPSVGLAIVATNLEEGENA---VKLLDSRYWHCIPFIFVEDESEENSVLWRSAATLRLLTSGQISPQD------RRIIYTPNPFLVSHIDFVEESLAETHLVSSSQSFYTCCDVGCGAGRDSVWLAKRGR-GWLVRCVDRLPRCLDRVQRLACRHGVSNLIE-------CETSLVRGARVHSSSTS--------------PSFE----------TRKYDLVLAIRFFEREFLTSLGEMVRPGGGFLLLVSFVAREDG-VAYEHPKDPKKVLLAGELVQVFGTGGMGFETVENCSQILPDGRVMSAYLARR 368 SP +L+ W + + + L+D R RR++ S+ +P DL LFELP S+ A+ LE +NA KLL + W+ +P+IFVE E LW + L +L P + + ++ P+PFLV ID +EESL HL SS C D+ CG GRD+ WL+ R W V VD + LDR ++LA V I+ + S+ R SS TS P F+ ++YDLV++IRF REFL+++ +V+P GFLL+ +FV DG Y++P+ L GEL F GFE + + +++ DGR ++++LAR+ Sbjct: 238 VNSPKSTLYHW--INNSSKKLLLDFRPLHKHYTRRIIPSVCIPFTDLKKHLFELPSKSLPFAV----LEPHDNAGITQKLLIDQGWN-VPWIFVEGEE-----LWEVSRELGILEEIDDGPNNEFKNRLKWTLFQPSPFLVRTIDRIEESLK--HL--SSNHVVNCLDIACGNGRDAAWLSSRQTIDWRVTAVDAMSVALDRTRQLASDLDVLFKIQTFHAKIMVDGSVKRYQESLSSQTSMKDGDGASEMIKTRPKFDNIPEKEIEFLNKEYDLVISIRFLRREFLSNMASLVKP-RGFLLISTFV--NDGRHTYKNPRSNSHRLELGELATKFRK---GFEIINDEIELIEDGRPVNSFLARK 580
BLAST of EWM21098.1 vs. NCBI_GenBank
Match: gi|671692232|emb|CDS06965.1| (hypothetical protein LRAMOSA09488 [Lichtheimia ramosa]) HSP 1 Score: 125.561 bits (314), Expect = 1.530e-29 Identity = 106/333 (31.83%), Postives = 157/333 (47.15%), Query Frame = 0 Query: 68 VDVRSEEAFQARRLVSSINLPIDDLVNLLFELPEPSVGLAIVATNLEEGENAVKLLDSRYWHCIPFIFVEDESEENSVLWRSAATLRLLTSGQISPQDRRIIYTPNPFLVSHIDFVEESLAETHLVSSSQSFYTCCDVGCGAGRDSVWLAKRGRGWLVRCVDRLPRCLDRVQRLACRHGVSNLIECETSLVR--GARVHSSSTSPSFETRK----------------------------YDLVLAIRFFEREFLTSLGEMVRPGGGFLLLVSFVAREDGV-AYEHPKDPKKVLLAGELVQVFGTGGMGFETVENCSQILPDGR-VMSAYLARR 368 +D+RS A+Q R LV S N+P L ELP +V AIV GE + L R W C P++F +D+ E LW + T L+ G SP R +++ P PFL HID +E L + TC D+GCG+GRD WL RGW V +D ++R Q LA GV + LV+ A+V + SF+ K +D+V+ IRF R L L ++++P GG L++ FV +DGV Y+ P+ ++ L GEL +++G E + + + + DGR V S +A++ Sbjct: 19 LDLRSAAAYQTRHLVPSTNIPWQQLAQRCAELPPKNVPFAIVEPAHCRGE-CLPWLQERGWQC-PWVFSDDDDE----LWTADTT--LVEHG--SPSQRWLLFRPCPFLERHIDLIESRLTD---------HKTCLDIGCGSGRDVAWLMA-SRGWHVYALDSSNGAVERTQALAEHMGVKD------HLVKTMQAKVMADGGWRSFDDAKQVTLTKEQQYSPGIPADVFFRDKMGCNQFDMVVTIRFLVRSLLPHLPDLLKP-GGVLVISHFV--DDGVHEYDQPRKSHRLQL-GELAELYGQRK-DLEILVDVIEEIEDGRPVNSIIIAKK 320
BLAST of EWM21098.1 vs. NCBI_GenBank
Match: gi|1043307329|gb|OBZ91929.1| (Uncharacterized protein UNK4.09 [Choanephora cucurbitarum]) HSP 1 Score: 121.324 bits (303), Expect = 3.828e-28 Identity = 81/302 (26.82%), Postives = 140/302 (46.36%), Query Frame = 0 Query: 68 VDVRSEEAFQARRLVSSINLPIDDLVNLLFELPEPSVGLAIVATNLEEGENAVKLLDSRYWHCIPFIFVEDESEENSVLWRSAATLRLLTSGQISPQDRRIIYTPNPFLVSHIDFVEESLAETHLVSSSQSFYTCCDVGCGAGRDSVWLAKRGRGWLVRCVDRLPRCLDRVQRLACRHGVSNLIECETSLVRGARVHSSSTSPSFETRKYDLVLAIRFFEREFLTSLGEMVRPGGGFLLLVSFVAREDGVAYEHPKDPKKVLLAGELVQVFGTGGMGFETVENCSQILPDGRVMSAYLARRL 369 +D+R++ + A L+ S N+P LV ELP + +A++ T+ + +A+ L R WHC PF+ E+ ++ W+ R S + +++ P+PFL HI ++E + + TC D+GCGAGRD W+ + W D P + R+ +L + + ++ + + + P + YDLVL IRF R F + ++ GG F +L F+ +D Y+ PK + L GE+ +VFG E + N + DGR + + +R+ Sbjct: 17 LDLRTQAQYNACHLIPSTNIPFSQLVVRQAELPPKYMPMAVLHTH--DTTHAIDWLIQRGWHC-PFVIPEE-----ALDWKQLIEQRWAASCDGRDNQKWVLFQPSPFLKKHISYLEAKI--------ERPTRTCLDMGCGAGRDISWIVSTRQHWRATAFDSQPGAIQRMTQLVHYLNIQDRVQIGQVKFQHNQTWKWISKP-VPIQTYDLVLNIRFLSRPFWYKVPSLLNKGGCF-VLSQFLHDDDLCVYDQPKRSHR-LEKGEIEEVFGQME-DMEIIMNEIEKTEDGRPLQCVIIKRI 298
BLAST of EWM21098.1 vs. NCBI_GenBank
Match: gi|1183369460|gb|ORX95424.1| (hypothetical protein K493DRAFT_315001 [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 120.553 bits (301), Expect = 9.633e-28 Identity = 95/319 (29.78%), Postives = 154/319 (48.28%), Query Frame = 0 Query: 65 PRLVDVRSEEAFQARRLVSSINLPIDDLVNLLFELPEPSVGLAIVATNLEEGENAVKLLDSRYWHCIPFIFVE---DESEENSV-LWRSAATLRLLTSGQISPQDRRIIYTPNPFLVSHIDFVEESLAETHLVSSSQSFYTCCDVGCGAGRDSVWLAKRGR-GWLVRCVDRLPRCLDRVQRLACRHGVS-NLIECETSLVRGARVHSSSTSP--------SFETRKYDLVLAIRFFEREFLTSLGEMVRPGGGFLLLVSFVAREDGV-AYEHPKDPKKVLLAGELVQVFGTGGMGFETVENCSQILPDGRVMSAYLARR 368 PR++D+RSEE F+A+R+ +S N+P ++L FELP N +L + H IP E E+ N+ W +A L ++ G + ++++P PFL +I+ +E+ L + + +CCDVGCG+GRD WL R + W D L+R ++LA +S + C V S +S SF +++DLV+ IRF ER + + ++V P GG LL +FV DGV ++ P L GEL + FG + + +E + DGR ++++LA++ Sbjct: 19 PRILDLRSEEEFRAKRIKNSTNIPYEELARRWFELP--------------HRRNPFIILLPKDLHGIPDRLQEWTITEAFANTPEFWAAAEELGVVAEG--PERSVNLLFSPCPFLEENIEEIEDRLVK----GTRSETLSCCDVGCGSGRDVAWLCSRSKVSWSAHAADSWLGSLNRTRQLANSLNLSEKVTTCGARFTSEGTVKSVDSSKSEYTHEGASFLDKQFDLVICIRFLERSSFSIIDKLVAP-GGILLYSTFV---DGVIEFDKPSGKNHRLELGELKEYFGHYTILHDRIE----YIEDGRPVNSFLAQK 309
BLAST of EWM21098.1 vs. NCBI_GenBank
Match: gi|1183479212|gb|ORZ03051.1| (S-adenosyl-L-methionine-dependent methyltransferase [Syncephalastrum racemosum]) HSP 1 Score: 110.538 bits (275), Expect = 4.882e-24 Identity = 93/319 (29.15%), Postives = 145/319 (45.45%), Query Frame = 0 Query: 68 VDVRSEEAFQARRLVSSINLPIDDLVNLLFELPEPSVGLAIVATNLEEGENAVKLLDSRYWHCIPFIFVEDESEENSVLWRSAATLRLLTSGQISPQDRRIIYTPNPFLVSHIDFVEESLAETHLVSSSQSFYTCCDVGCGAGRDSVWLAKRGRGWLVRCVDRLPRCLDRVQRLACRHGVSNLIEC-ETSLVRGARVHSSST-----------SPS------FETRKYDLVLAIRFFEREFLTSLGEMVRPGGGFLLLVSFVAREDGVAYEHPKDPKKVLLAGELVQVFGTGGMGFETVENCSQILPDGRVMSAYLARR 368 +D+R + QA+RL SS +P DL ELP SV A++ A+ L W C +V D S+ W +A L+ G +++ P PFL + + ++ + T L +C D+GCG+GRD+ +L RG W V +D LP ++R +LA V +E + ++ H +P F ++YDLVL IRF + L L +V+P GG+LL+ FV EDG Y P+ +V L EL ++G E V + + + DGR +++ L R+ Sbjct: 20 LDLRPLDEHQAKRLRSSTCIPWKDLSLRCAELPAKSVPFAVLIPF--SNHPALTWLPEHGWDCT---WVFDASQPP--FWEAAEMYGLVCRGP-DEGPPALLFRPCPFLAAQLPLIQAAKNGTSL--------SCLDIGCGSGRDTAYLLTRG--WHVDAIDSLPNAVERTLQLATHMRVHAKLEAWQVKIMANGAWHEQKNMREGIPKEERFAPGVPMDVYFSGKQYDLVLTIRFLVKTLLPDLPRLVKP-GGYLLISHFV--EDGSEYRQPRKEHRVQL-NELSSLYG-AQKDLEVVIDVIEKIEDGRPVNSVLIRK 315
BLAST of EWM21098.1 vs. NCBI_GenBank
Match: gi|1101248413|gb|OIP94310.1| (hypothetical protein AUK56_09170 [Thiomicrospira sp. CG2_30_44_34]) HSP 1 Score: 108.227 bits (269), Expect = 1.804e-23 Identity = 85/303 (28.05%), Postives = 149/303 (49.17%), Query Frame = 0 Query: 67 LVDVRSEEAFQARRLVSSINLPIDDLVNLLFELPEPSVGLAIVATNLEEGENAVKLLDSRYWHCIPFIFVEDESEENSVLWRSAATLRLLTSGQISPQDRRIIYTPNPFLVSHIDFVEESLAETHLVSSSQSFYTCCDVGCGAGRDSVWLAKRGRGWLVRCVDRLPRCLDRVQRLACRHGVSNLIECETSLVRGARVHSSSTSPSFETRKYDLVLAIRFFEREFLTSLGEMVRPGGGFLLLVSFVAREDGV-AYEHPKDPKKVLLAGELVQVFGTGGMGFETVENCSQILPDGRVMSAYLARR 368 L+D+R++EA+Q+ + + +LP DL L ELPE L ++ +L + L++ Y I + E + L +L ++ RI++ +P L + I E + ++S + D+GCG GRDSV+LA RGW V +DR R L R Q+LA +L RV T + DL++ +R+ R+ +T + +M+ P GG++++ +FV +GV A+ PK+P +L GEL + F + + +E+ L DGR +++++A++ Sbjct: 9 LIDLRADEAYQSGHYLEATHLPWPDLQIRLNELPERPARLQLLGDDLALTAASAFLINKGYQ-----ISCQMSLERFEQFRQKYPGLVVLG------RESRILWRASPLLFAFITRYENKDLQPSVLSGKR---LALDIGCGGGRDSVYLA--CRGWQVIAIDREQRVLQRAQQLA--------ESSRQNLTIDWRVCCVDAEGCLPTEQVDLIVMMRYLNRDLMTKMDQMLNP-GGYVIIQTFV---EGVEAFGSPKNPNFILKKGELAKTFSVFNIIVDRIEH----LKDGRPVASFIAQK 279
BLAST of EWM21098.1 vs. NCBI_GenBank
Match: gi|740313122|ref|WP_038150443.1| (hypothetical protein [Thiomicrospira chilensis]) HSP 1 Score: 105.145 bits (261), Expect = 2.453e-22 Identity = 85/303 (28.05%), Postives = 145/303 (47.85%), Query Frame = 0 Query: 67 LVDVRSEEAFQARRLVSSINLPIDDLVNLLFELPEPSVGLAIVATNLEEGENAVKLLDSRYWHCIPFIFVEDESEENSVLWRSAATLRLLTSGQISPQDRRIIYTPNPFLVSHIDFVEESLAETHLVSSSQSFYTCCDVGCGAGRDSVWLAKRGRGWLVRCVDRLPRCLDRVQRLACRHGVSNLIECETSLVRGARVHSSSTSPSFETRKYDLVLAIRFFEREFLTSLGEMVRPGGGFLLLVSFVAREDGV-AYEHPKDPKKVLLAGELVQVFGTGGMGFETVENCSQILPDGRVMSAYLARR 368 ++D+RS E F+ L S + D+ + L ELP L +V ++ E ++ L + Y + E+ W+ + L IS ++ + +++P+ + I E+ + S T D+GCG GRD+V+LAK +GW V +D+ R + R ++LA R G S +C + + P E +DLVL +RF R + + V+P GG+L+ +FV +GV + PK+P +L GEL QVF F+ + + ILPDGR ++ ++ ++ Sbjct: 10 ILDLRSFEEFKVAHLPESTWMAWQDVPDHLNELPAAPAKLFLVGSHQAIEEVSLYLHEKNYQVSGSLLI---NHAEDLARWQ-----QQLPGLFISGKESKTLWSPSALVKEFI--------ESVVTDSKSHAGTAIDLGCGGGRDAVFLAK--QGWKVTAIDQESRVIKRAKQLASRAGASVKWKC-------CDLKKAGCLPETE---FDLVLVMRFLNRNLYSEIDARVKP-GGWLVFQTFV---EGVEVFGSPKNPNYILRKGELAQVFAD----FKVIIDRIDILPDGRPVACFVGQK 276 The following BLAST results are available for this feature:
BLAST of EWM21098.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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