EWM21107.1, cds9561 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21107.1 vs. NCBI_GenBank
Match: gi|585101174|gb|EWM21107.1| (Protein of unknown function DUF652 [Nannochloropsis gaditana]) HSP 1 Score: 583.178 bits (1502), Expect = 0.000e+0 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0 Query: 1 MRKWLRFYRIVYGITPPYKILVDGNFIHMALKVKIDIRDRLKKMLLVENLACYAPQAVLDELAAMGPDFRAAHEWVQSCCDLVPNPTIKTNHDDSGKNYVSAGAAICTMVGEKNIDKYMVATQDQELKARLRHVPSVALLFVSRAVFLMEAPSTSSRLFSAKQEGEKFRLLTEEERCLLASLRHKEKPVLSQGSSQASEQQQKALTKSRVRLKKRAKGPNPLSVKKSDKAKVQKERRVPQDKPGSKKYTGGQKGNEVGGGHVSCAKKRTRQRRKGKPVLEKE 282 MRKWLRFYRIVYGITPPYKILVDGNFIHMALKVKIDIRDRLKKMLLVENLACYAPQAVLDELAAMGPDFRAAHEWVQSCCDLVPNPTIKTNHDDSGKNYVSAGAAICTMVGEKNIDKYMVATQDQELKARLRHVPSVALLFVSRAVFLMEAPSTSSRLFSAKQEGEKFRLLTEEERCLLASLRHKEKPVLSQGSSQASEQQQKALTKSRVRLKKRAKGPNPLSVKKSDKAKVQKERRVPQDKPGSKKYTGGQKGNEVGGGHVSCAKKRTRQRRKGKPVLEKE Sbjct: 1 MRKWLRFYRIVYGITPPYKILVDGNFIHMALKVKIDIRDRLKKMLLVENLACYAPQAVLDELAAMGPDFRAAHEWVQSCCDLVPNPTIKTNHDDSGKNYVSAGAAICTMVGEKNIDKYMVATQDQELKARLRHVPSVALLFVSRAVFLMEAPSTSSRLFSAKQEGEKFRLLTEEERCLLASLRHKEKPVLSQGSSQASEQQQKALTKSRVRLKKRAKGPNPLSVKKSDKAKVQKERRVPQDKPGSKKYTGGQKGNEVGGGHVSCAKKRTRQRRKGKPVLEKE 282
BLAST of EWM21107.1 vs. NCBI_GenBank
Match: gi|553195865|ref|XP_005856221.1| (rrna-processing utp23-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422292836|gb|EKU20138.1| rrna-processing utp23-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 538.11 bits (1385), Expect = 0.000e+0 Identity = 262/263 (99.62%), Postives = 262/263 (99.62%), Query Frame = 0 Query: 20 ILVDGNFIHMALKVKIDIRDRLKKMLLVENLACYAPQAVLDELAAMGPDFRAAHEWVQSCCDLVPNPTIKTNHDDSGKNYVSAGAAICTMVGEKNIDKYMVATQDQELKARLRHVPSVALLFVSRAVFLMEAPSTSSRLFSAKQEGEKFRLLTEEERCLLASLRHKEKPVLSQGSSQASEQQQKALTKSRVRLKKRAKGPNPLSVKKSDKAKVQKERRVPQDKPGSKKYTGGQKGNEVGGGHVSCAKKRTRQRRKGKPVLEKE 282 ILVDGNFIHMALKVKIDIRDRLKKMLLVENLACYAPQAVLDELAAMGPDFRAAHEWVQSCCDLVPNPTIKTNHDDSGKNYVSAGAAICTMVGEKNIDKYMVATQDQELKARLRHVPSVALLFVSRAVFLMEAPS SSRLFSAKQEGEKFRLLTEEERCLLASLRHKEKPVLSQGSSQASEQQQKALTKSRVRLKKRAKGPNPLSVKKSDKAKVQKERRVPQDKPGSKKYTGGQKGNEVGGGHVSCAKKRTRQRRKGKPVLEKE Sbjct: 1 ILVDGNFIHMALKVKIDIRDRLKKMLLVENLACYAPQAVLDELAAMGPDFRAAHEWVQSCCDLVPNPTIKTNHDDSGKNYVSAGAAICTMVGEKNIDKYMVATQDQELKARLRHVPSVALLFVSRAVFLMEAPSISSRLFSAKQEGEKFRLLTEEERCLLASLRHKEKPVLSQGSSQASEQQQKALTKSRVRLKKRAKGPNPLSVKKSDKAKVQKERRVPQDKPGSKKYTGGQKGNEVGGGHVSCAKKRTRQRRKGKPVLEKE 263
BLAST of EWM21107.1 vs. NCBI_GenBank
Match: gi|1214700646|gb|OWZ13187.1| (RRNA-processing protein [Phytophthora megakarya]) HSP 1 Score: 137.887 bits (346), Expect = 4.785e-36 Identity = 85/233 (36.48%), Postives = 128/233 (54.94%), Query Frame = 0 Query: 1 MRKWLRFYRIVYGITPPYKILVDGNFIHMALKVKIDIRDRLKKMLLVENLAC--YAPQAVLDELAAMGPDFRAAHEWVQSCCDLVPNPTIKTNHDDSGKNYVSAGAAICTMVGEKNIDKYMVATQDQELKARLRHVPSVALLFVSRAVFLMEAPSTSSRLFSAKQEGEKFRLLTEEERCLLASLRHKEKPVLSQ----GSSQASEQQQKALTKSRVRLKKRAKGPNPLSVKKS 227 +RK LR + + GI PPYK+L+DGNFI M +++K+D+ +R+ K L V+ C Y P+A L+EL +G + A+E +S + H+ + I T++G+KN K++V TQ+ EL+ LR VP V LL+++R+V + E S ++ ++ +EE+ +A L EK L Q Q E QQ+ LT KKRAKGPNPLS+KKS Sbjct: 9 IRKALRQFHFLCGIKPPYKVLLDGNFIAMCMQMKVDVHERVPKYLQVKPHECEFYVPRAALEELKMLGEAMKEAYELAKSF-------KVAETHNQPKNEAMDVSKCIQTIIGDKNDGKFVVCTQEVELRKALRQVPGVPLLYLNRSVLVFEEISRAT-----------LAIVRQEEKANMAKLDVNEKRKLDQMQEDNDDQTHEPQQQRLT------KKRAKGPNPLSMKKS 217
BLAST of EWM21107.1 vs. NCBI_GenBank
Match: gi|673054049|ref|XP_008880985.1| (hypothetical protein H310_14829 [Aphanomyces invadans] >gi|574463293|gb|ETV90375.1| hypothetical protein H310_14829 [Aphanomyces invadans]) HSP 1 Score: 125.176 bits (313), Expect = 3.367e-31 Identity = 87/233 (37.34%), Postives = 128/233 (54.94%), Query Frame = 0 Query: 1 MRKWLRFYRIVYGITPPYKILVDGNFIHMALKVKIDIRDRLKKMLLVENLACYAPQAVLDELAAM--GPDFRAAHEWVQSCCDLVPNPTIKTNHDDSGKNYVSAGAAICTMVGEKNIDKYMVATQDQELKARLRHVPSVALLFVSRAVFLMEAPSTSSRLFSAKQEGEKFRLLTEEERCLLASLRHKEKPVLSQGSSQASEQQQKALTKSRVRLKKRAKGPNPLSVKKSDKAK 231 +RK LR ++ + GI PPYK+L+DGNFI M +K+ +DI RL L N + +AVLDEL + D RAA E S ++V TN D+ + ++A +G +N K++VATQ+ EL+++LR VP V L++++R+V + E S ++ S K + K L E + K + V S +A E++ RL KRAKGPNPLSVKK+ K K Sbjct: 9 IRKALRQFQFLCGIKPPYKVLLDGNFIAMCIKMHVDIAVRLPTFLQTNNCTYFVTRAVLDELKLLSDNADMRAAWE-AASSFEVVEGDPDATN--DATNSMLAA-------IGSRNDRKFIVATQETELRSQLRRVPGVPLIYLNRSVLVFEDMSEATLRISRKDDHAKAAKLNAGE-------KRKLEAVASSTVREAPEKKS--------RLVKRAKGPNPLSVKKATKPK 216
BLAST of EWM21107.1 vs. NCBI_GenBank
Match: gi|953487659|emb|CEG48487.1| (Uncharacterized proteins of PilT N-term./Vapc superfamily [Plasmopara halstedii]) HSP 1 Score: 125.176 bits (313), Expect = 4.000e-31 Identity = 80/229 (34.93%), Postives = 126/229 (55.02%), Query Frame = 0 Query: 1 MRKWLRFYRIVYGITPPYKILVDGNFIHMALKVKIDIRDRLKKMLLVENLAC--YAPQAVLDELAAMGPDFRAAHEWVQSCCDLVPNPTIKTNHDDSGKNYVSAGAAICTMVGEKNIDKYMVATQDQELKARLRHVPSVALLFVSRAVFLMEAPSTSSRLFSAKQEGEKFRLLTEEERCLLASLRHKEKPVLSQGSSQASEQQQKALTKSRVRLKKRAKGPNPLSVKKS 227 +RK LR + + GI PPYK+L+DGNFI M +++K+++ +R+ K L V+ C Y P+AVLDEL +G + A+ +S + +D + V I T++G+KN K+ V TQ+ EL+ LR VP V L++++R+V + E S ++ ++ +EE +A L K L Q Q ++ + + R+ +KKRAKGPNPLS KKS Sbjct: 9 IRKALRQFHFLCGIKPPYKVLLDGNFIAMCIQMKVNVNERVSKYLQVKQHECEFYVPRAVLDELKTLGEATKEAYHLAKS----FKVAEVFGQAEDDKQVTVDVSKYIQTIIGDKNDRKFFVCTQEVELRKALRLVPGVPLIYLNRSVLVFEEISRAT-----------LAIVRQEEEANMAKLDINVKRKLEQ--IQENKHETGYAEQGRI-VKKRAKGPNPLSFKKS 219
BLAST of EWM21107.1 vs. NCBI_GenBank
Match: gi|698781557|ref|XP_009823822.1| (hypothetical protein H257_02034 [Aphanomyces astaci] >gi|574121546|gb|ETV87023.1| hypothetical protein H257_02034 [Aphanomyces astaci]) HSP 1 Score: 122.865 bits (307), Expect = 2.393e-30 Identity = 86/233 (36.91%), Postives = 127/233 (54.51%), Query Frame = 0 Query: 1 MRKWLRFYRIVYGITPPYKILVDGNFIHMALKVKIDIRDRLKKMLLVENLACYAPQAVLDELAAMG--PDFRAAHEWVQSCCDLVPNPTIKTNHDDSGKNYVSAGAAICTMVGEKNIDKYMVATQDQELKARLRHVPSVALLFVSRAVFLMEAPSTSSRLFSAKQEGEKFRLLTEEERCLLASLRHKEKPVLSQGSSQASEQQQKALTKSRVRLKKRAKGPNPLSVKKSDKAK 231 +RK LR ++ + GI PPYK+L+DGNFI M +K+ +DI RL L + + +AVLDEL + D RAA E S ++V + + D + V+A VG +N K++VATQ+ EL+ RLR VP V L++++R+V + E S ++ S K + K L + E + K + V S +A E+ + RL KRAKGPNPLS+KK+ K K Sbjct: 9 IRKSLRQFQFLCGIKPPYKVLLDGNFIAMCIKMHVDIAVRLPSFLQTDKCTYFVTRAVLDELKLLSDDADMRAAWE-AASAFEVVEGGSDDDDSTDVTSSMVAA-------VGARNDKKFIVATQETELRGRLRRVPGVPLIYLNRSVLVFEDMSEATLRISRKDDHAKETKLNDSE-------KRKLEAVASSAPKEAPEK--------KARLVKRAKGPNPLSMKKATKPK 218
BLAST of EWM21107.1 vs. NCBI_GenBank
Match: gi|695396842|ref|XP_009521587.1| (hypothetical protein PHYSODRAFT_350283 [Phytophthora sojae] >gi|348686484|gb|EGZ26299.1| hypothetical protein PHYSODRAFT_350283 [Phytophthora sojae]) HSP 1 Score: 122.865 bits (307), Expect = 2.971e-30 Identity = 82/231 (35.50%), Postives = 133/231 (57.58%), Query Frame = 0 Query: 1 MRKWLRFYRIVYGITPPYKILVDGNFIHMALKVKIDIRDRLKKMLLVE--NLACYAPQAVLDELAAMGPDFRAAHEWVQS--CCDLVPNPTIKTNHDDSGKNYVSAGAAICTMVGEKNIDKYMVATQDQELKARLRHVPSVALLFVSRAVFLMEAPSTSSRLFSAKQEGEKFRLLTEEERCLLASLRHKEKPVLSQGSSQASEQQQKALTKSRVRLKKRAKGPNPLSVKKS 227 +RK LR + + GI PPYK+L+DGNFI M +++K+D+++R+ K L V+ + Y P+A L+EL +G + A+E Q+ ++ P KT+ D V + +++G+KN K++V TQ+ EL+ LR VP V L++++R+V + E S ++ ++ ++E+ +A L EK L Q Q E+ + K R+ KKRAKGPNPLS+KKS Sbjct: 9 IRKALRQFHFLCGIKPPYKVLLDGNFIAMCVQMKVDVQERVPKFLQVKAHEVEFYVPRAALEELKMLGEATKEAYELAQNFKVAEVYDQP--KTDGDAP----VDVSKVVQSIIGDKNDRKFVVCTQEVELRKALRLVPGVPLIYLNRSVLVFEDISRAT-----------LAIVRQDEKANMAKLDVNEKRKLEQ--MQGGEEGEDHEEKQRL-TKKRAKGPNPLSMKKS 219
BLAST of EWM21107.1 vs. NCBI_GenBank
Match: gi|675174453|ref|XP_008896111.1| (hypothetical protein PPTG_04040 [Phytophthora parasitica INRA-310] >gi|566013346|gb|ETI36257.1| hypothetical protein F443_17608 [Phytophthora parasitica P1569] >gi|567950741|gb|ETK76449.1| hypothetical protein L915_17145 [Phytophthora parasitica] >gi|567979410|gb|ETL29889.1| hypothetical protein L916_17041 [Phytophthora parasitica] >gi|568008903|gb|ETL83117.1| hypothetical protein L917_16868 [Phytophthora parasitica] >gi|568038808|gb|ETM36324.1| hypothetical protein L914_16947 [Phytophthora parasitica] >gi|568038831|gb|ETM36346.1| hypothetical protein L914_16946 [Phytophthora parasitica] >gi|568103779|gb|ETN18436.1| hypothetical protein PPTG_04040 [Phytophthora parasitica INRA-310] >gi|570317003|gb|ETO64951.1| hypothetical protein F444_17649 [Phytophthora parasitica P1976] >gi|570940794|gb|ETP06051.1| hypothetical protein F441_17477 [Phytophthora parasitica CJ01A1] >gi|570971041|gb|ETP34160.1| hypothetical protein F442_17463 [Phytophthora parasitica P10297] >gi|970659619|gb|KUF97243.1| hypothetical protein AM588_10011331 [Phytophthora nicotianae]) HSP 1 Score: 122.479 bits (306), Expect = 3.410e-30 Identity = 79/224 (35.27%), Postives = 124/224 (55.36%), Query Frame = 0 Query: 1 MRKWLRFYRIVYGITPPYKILVDGNFIHMALKVKIDIRDRLKKMLLVENLAC--YAPQAVLDELAAMGPDFRAAHEWVQSCCDLVPNPTIKTNHDDSGKNYVSAGAAICTMVGEKNIDKYMVATQDQELKARLRHVPSVALLFVSRAVFLMEAPSTSSRLFSAKQEGEKFRLLTEEERCLLASLRHKEKPVLSQGSSQASEQQQKALTKSRVRLKKRAKGPNPL 222 +RK LR + + GI PPYK+L+DGNFI M L++K+D+ +R+ K L V+ C Y P+A LDEL +G + A++ +S + +D + V I +++GEKN K++V TQ+ EL+ LR VP V L++++R+V + E S ++ ++ +EE+ +A L EK L Q Q E ++ R++ KKRAKGPNPL Sbjct: 9 IRKALRQFHFLCGIKPPYKVLLDGNFIAMCLQMKVDVHERVPKYLQVKPHECEFYVPRAALDELKTLGEATKEAYDLAKS----FKVAEVYGQSEDEKQETVDVSKYIQSIIGEKNERKFVVCTQEVELRKALRLVPGVPLIYLNRSVLVFEEISRAT-----------LAIVRQEEKASMAKLDVNEKRKLEQ--MQEGESEESREEHQRLK-KKRAKGPNPL 214
BLAST of EWM21107.1 vs. NCBI_GenBank
Match: gi|970624103|gb|KUF72060.1| (rRNA-processing protein utp23 [Phytophthora nicotianae]) HSP 1 Score: 122.479 bits (306), Expect = 4.305e-30 Identity = 79/224 (35.27%), Postives = 124/224 (55.36%), Query Frame = 0 Query: 1 MRKWLRFYRIVYGITPPYKILVDGNFIHMALKVKIDIRDRLKKMLLVENLAC--YAPQAVLDELAAMGPDFRAAHEWVQSCCDLVPNPTIKTNHDDSGKNYVSAGAAICTMVGEKNIDKYMVATQDQELKARLRHVPSVALLFVSRAVFLMEAPSTSSRLFSAKQEGEKFRLLTEEERCLLASLRHKEKPVLSQGSSQASEQQQKALTKSRVRLKKRAKGPNPL 222 +RK LR + + GI PPYK+L+DGNFI M L++K+D+ +R+ K L V+ C Y P+A LDEL +G + A++ +S + +D + V I +++GEKN K++V TQ+ EL+ LR VP V L++++R+V + E S ++ ++ +EE+ +A L EK L Q Q E ++ R++ KKRAKGPNPL Sbjct: 9 IRKALRQFHFLCGIKPPYKVLLDGNFIAMCLQMKVDVHERVPKYLQVKPHECEFYVPRAALDELKTLGEATKEAYDLAKS----FKVAGVYGQSEDEKQETVDVSKYIQSIIGEKNERKFVVCTQEVELRKALRLVPGVPLIYLNRSVLVFEEISRAT-----------LAIVRQEEKASMAKLDVNEKRKLEQ--MQEGESEESREEHQRLK-KKRAKGPNPL 214
BLAST of EWM21107.1 vs. NCBI_GenBank
Match: gi|971515384|dbj|GAQ82813.1| (PIN domain containing protein [Klebsormidium nitens]) HSP 1 Score: 120.553 bits (301), Expect = 5.069e-29 Identity = 87/272 (31.99%), Postives = 131/272 (48.16%), Query Frame = 0 Query: 1 MRKWLRFYRIVYGITPPYKILVDGNFIHMALKVKID----IRDRLKKMLLVENLACYAPQAVLDELAAMGPDFRAAHEWVQS-----CCDLVPNPTIKTNHDDSGKNYVSAGAAICTMVGEKNIDKYMVATQDQELKARLRHVPSVALLFVSRAVFLMEAPSTSSRLFSAKQEGEKFRLLTEEERCLLASLRHKEKPVLSQGSSQASEQQQKALTKSR-------VRLKKRAKGPNPLSVKKSDKAKVQKERRVPQDKPGSKKY--TGGQKG 254 +RK +RFY++ +G PYK+L+DGNFIH ++ + IRD L K + + EL A+GP+F + ++ C P P A + +MVG+ N + + VA+QD EL+ RLR VP ALLF+S A ++E PS + + + E E+ L E+R L L + V + S A+E Q ++R R +KR KGPNPLS+KK ++ K GSK+ +GG +G Sbjct: 9 VRKTIRFYKVCFGFKEPYKVLLDGNFIHQSVHSQAAGQGAIRDVLHKFFSGATKPMVT-RCISAELRALGPEFAKSSSAARTLDMARCIHETPVP---------------ASECVLSMVGQDNHEHFFVASQDAELRKRLRTVPGTALLFLSTAGLILEPPSETQQKVAKLSEAERLHLNEREQRAALRQLEAAQAAVPAPVESPAAEAPQSEHPEARGQEAAPGPRKRKRPKGPNPLSMKK---------KKAEDGKGGSKQISQSGGAEG 255 The following BLAST results are available for this feature:
BLAST of EWM21107.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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