EWM21130.1, cds9548 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21130.1 vs. NCBI_GenBank
Match: gi|585101197|gb|EWM21130.1| (hypothetical protein Naga_100041g18 [Nannochloropsis gaditana]) HSP 1 Score: 1199.11 bits (3101), Expect = 0.000e+0 Identity = 587/587 (100.00%), Postives = 587/587 (100.00%), Query Frame = 0 Query: 1 MSLLQKQGRRLGGKALRATRDAASSASPLARPWCRLPSDLTTTRSQVAATIFAVLLAVLKMESVGAWRVLPIGIPSGVSKMGSRVGHPTPLFTSPPQNVLPDPPLQEDSSASEITPSPVVQSFSPFLGRQRRRPGLLFEEEIDFCLAAPSLEGVSVGNSRVEIAKVVNTFVNQAAKKILIGFDCCFGEVADGVKDRLRTDFLSGDEASAEDRTCVEGACAFIDAVVALSPCSDLEVNATKGALVPPYTQAYARVLDTLLSNDCELRHSDSSALSTTASTDPPSPPLKVRPRDRDICLSLYDTITGAPTKTKVLNTISNRVSRTMLYADEDDVAKLTNELTKGKPGFLEKWVGGEEGCDEAVYYGALIAYLTGGLEAPAPAAMGGGYSNAYQRFTTSLVQELGTRSASVDPEMFDAFVRWESTLRKNLTQDMWDRHPKELTGQWTLVDSGPNPAGATTLPGPGAETGKGEQRSANLVFRRDGTLRVPPELGMDGTWSFEPGPTHLDTIRFELRQGTPDNRVLCYTGYVDRGQRIETRFSKRPIKMKGRVVLRARGEARSSGKFSMQLCKKNTLLENLVVGSTRGSVQE 587 MSLLQKQGRRLGGKALRATRDAASSASPLARPWCRLPSDLTTTRSQVAATIFAVLLAVLKMESVGAWRVLPIGIPSGVSKMGSRVGHPTPLFTSPPQNVLPDPPLQEDSSASEITPSPVVQSFSPFLGRQRRRPGLLFEEEIDFCLAAPSLEGVSVGNSRVEIAKVVNTFVNQAAKKILIGFDCCFGEVADGVKDRLRTDFLSGDEASAEDRTCVEGACAFIDAVVALSPCSDLEVNATKGALVPPYTQAYARVLDTLLSNDCELRHSDSSALSTTASTDPPSPPLKVRPRDRDICLSLYDTITGAPTKTKVLNTISNRVSRTMLYADEDDVAKLTNELTKGKPGFLEKWVGGEEGCDEAVYYGALIAYLTGGLEAPAPAAMGGGYSNAYQRFTTSLVQELGTRSASVDPEMFDAFVRWESTLRKNLTQDMWDRHPKELTGQWTLVDSGPNPAGATTLPGPGAETGKGEQRSANLVFRRDGTLRVPPELGMDGTWSFEPGPTHLDTIRFELRQGTPDNRVLCYTGYVDRGQRIETRFSKRPIKMKGRVVLRARGEARSSGKFSMQLCKKNTLLENLVVGSTRGSVQE Sbjct: 1 MSLLQKQGRRLGGKALRATRDAASSASPLARPWCRLPSDLTTTRSQVAATIFAVLLAVLKMESVGAWRVLPIGIPSGVSKMGSRVGHPTPLFTSPPQNVLPDPPLQEDSSASEITPSPVVQSFSPFLGRQRRRPGLLFEEEIDFCLAAPSLEGVSVGNSRVEIAKVVNTFVNQAAKKILIGFDCCFGEVADGVKDRLRTDFLSGDEASAEDRTCVEGACAFIDAVVALSPCSDLEVNATKGALVPPYTQAYARVLDTLLSNDCELRHSDSSALSTTASTDPPSPPLKVRPRDRDICLSLYDTITGAPTKTKVLNTISNRVSRTMLYADEDDVAKLTNELTKGKPGFLEKWVGGEEGCDEAVYYGALIAYLTGGLEAPAPAAMGGGYSNAYQRFTTSLVQELGTRSASVDPEMFDAFVRWESTLRKNLTQDMWDRHPKELTGQWTLVDSGPNPAGATTLPGPGAETGKGEQRSANLVFRRDGTLRVPPELGMDGTWSFEPGPTHLDTIRFELRQGTPDNRVLCYTGYVDRGQRIETRFSKRPIKMKGRVVLRARGEARSSGKFSMQLCKKNTLLENLVVGSTRGSVQE 587
BLAST of EWM21130.1 vs. NCBI_GenBank
Match: gi|298707676|emb|CBJ25993.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 219.55 bits (558), Expect = 3.084e-61 Identity = 162/460 (35.22%), Postives = 224/460 (48.70%), Query Frame = 0 Query: 138 FEEEIDFCLAAPSLEGVSVGNSRVEIAKVVNTFVNQAAKKILIGFDCCFGEVADGVKDRLRTDFLSGDEASAEDRTCVEGACAFIDAV--VALSPCSDLEVNATKGALVPPYTQAYARVLDTLLSNDCELRHSDSSALSTTASTDPPSPPLKVRPRDRDICLSLYDTITGA-----PTKTKVLNTISNRVSRTMLYADEDDVAKLTNELTKGKPGFLEKWVG--GEEGCDEAVYYGALIAYLTGGLEAPAPAAMGGGYSNAYQRFTTSLVQELGTRSASVDPEMFDAFVRWESTLRKNLTQDMWDRHPKELTGQWTLVDSGPNPAGATTLP------GPGAETGKGEQRSANLV--FRRDGTLRVPPELGMDGTWSFEPGPTHLDTIRFELRQGTPDNR-----------VLCYTGYVDRGQRIETRFSKRPIKMKGRVVLRARGEARSSGKFSMQLCKK 569 F E++FCL PS + V G S + K +NT N+ K +LI E A ++ DF +A + A A++ V +A+ C +E T AL Y A+ RV L C + D SA ++RP D+DICLS+ D A T T+ LNT+ NRV RT+ ++D+ L E+ F+ K G +G E ++Y AL+ + GL A+ G Y N+YQR LVQE+GTRS + +F+ WE +RK LT+ W P +L G W L SG + G T LP G G G + ++LV FR+DGT+++P E G+ W EPGPTHLDTI FE+ P + L YTGYVDRG RIE RFSKR +KM GR+ RG+ R S +F+M+L + Sbjct: 34 FMGELNFCLG-PS-DSVLSGPS---LLKDLNTATNKIVKNLLILNSPEDSEPAMRDALKIEADF----DAQHSESPQYPAAKAYLSCVRQLAIEGCPAVE---TLDALSEVYKPAFRRVAGALSDFGCTITPGDDSAG-------------RIRPVDKDICLSILDYAVPAREQEGTTPTRALNTLVNRVVRTVCVGSDEDLQALAREMESKHNKFMTKCFGKGSWQGTQEDMFYHALVNLVKNGLTDEGVPALSGAYLNSYQRLMGILVQEVGTRSTPASEMVLKSFLAWEREIRKELTEPAWKSRPSDLVGSWALNTSGWD--GLTDLPVDSSAAGGGTTDGMVDLGLSDLVVSFRKDGTVQIPVEKGVGLQWRVEPGPTHLDTIYFEMIPAAPKVKASSKAGAGGATTLSYTGYVDRGARIEARFSKRFLKMTGRMTSVERGQERPSTRFAMRLVAR 466
BLAST of EWM21130.1 vs. NCBI_GenBank
Match: gi|397647658|gb|EJK77799.1| (hypothetical protein THAOC_00345 [Thalassiosira oceanica]) HSP 1 Score: 113.235 bits (282), Expect = 1.924e-22 Identity = 92/291 (31.62%), Postives = 131/291 (45.02%), Query Frame = 0 Query: 307 PTKTKVLNTISNRVSRTMLYADEDDVAKLTNELTKGKPGFLEKWVGGE--EGCDE-------AVYYGALI-----AYLTGGLEAPAPAA-MGGGYSNAYQRFTTSLVQELGT------------------------RSASVDP----EMFDAFVRWESTLRKNLTQDMWDRHPKELTGQWTLVDSGPNPAGATTLPGPGAETGKGEQRSANLVFRRDGTLRV-PPELGMDGTWSFEPGPTHLDTIRFELRQGTPDNRVLCYTGYVDRGQRIETRFSKRPIKMKGRVVLRAR 553 PT T+ LN +SN V RT+++ + ++ L + KP F+++W G+ E D Y +LI Y G L P + GY N+Y R T SL+ ELG+ S++ P E + F +WEST+RKN + +P +L G WT+ D G T+ G E +VF G L V PP G+ W + GPTHLDT F++ + D +L Y G+VDRG R+E R SKR + M+G V R Sbjct: 428 PTMTRQLNVLSNIVQRTLIFGGDQELLVLAETMDADKPAFIQRWYSGDSAEVADRMNETRSGVQYLNSLIQLLRDCYTKGVLRNVEPTLPLSSGYKNSYSRLTASLI-ELGSGYVRPSASSSLSLALTTTAATAQYLSSTTPPKSAREELNRFAQWESTVRKNRA----NPYPDDLVGTWTVEDI----VGFQTV-------GTSE-----VVFEPQGKLTVKPPLQGL--RWRLDAGPTHLDTCTFQVL--SDDGAILQYKGFVDRGSRLEARVSKRSVSMRGGVSFLMR 693
BLAST of EWM21130.1 vs. NCBI_GenBank
Match: gi|1210516856|dbj|GAX24345.1| (hypothetical protein FisN_4Lh466 [Fistulifera solaris]) HSP 1 Score: 108.612 bits (270), Expect = 3.250e-21 Identity = 101/382 (26.44%), Postives = 156/382 (40.84%), Query Frame = 0 Query: 247 YTQAYARVLDTLLSNDCELRHSDSSALSTTASTDPPSPPLKVRPR--DRDICLSLYDTI---------------------------------------TGAPTKTKVLNTISNRVSRTMLYADEDDVAKLTNELTKGKPGFLEKWVGGEEGCDE-----------AVYYGALIAYL----TGGLEAPA--PAAMGGGYSNAYQRFTTSLVQELGTRSASVDP-------------EMFDAFVRWESTLRKNLTQD---MWDRHPKELTGQWTLVDSGPNPAGATTLPGPGAETGKGEQRSANLVFRRDGTLRVP-PELGMDGTWSFEPGPTHLDTIRFELRQGTPDNRVLCYTGYVDRGQRIETRFSKRPIKMKGRVVLRAR 553 Y +AY RV+ L +++ DP + K+ + D+DICLS+ D I P+ T+ LN+++N V R +L+ + ++ L L + F+++W G DE + L+ L T G+ P A+ Y+NAY+R S+V ELG+ P E F WE+T R+ QD + + +P +L G W + D TT S L+ G+++V P G+ TW +PGPTHLDT F++ + D VL Y G++DRG R+E RFSKRPI+++G V + R Sbjct: 205 YDEAYKRVIAVL------------NSVGIVFEVDPETKRQKIASKIIDQDICLSMIDKIQLRNPVPDLEVANTLPSDNTTSEEDYKITKEDLGGVLLSAKEPSMTRQLNSLANIVERALLFGGDQELIVLAETLDADRAAFIDRWYPNTGGLDEDRPWDAERRPGVQFLNCLVHLLRDCYTNGVVTTLDPPFALANSYANAYERLVASVV-ELGSGYLKPVPNDILALPKPRTAQEELGRFAVWETTFRQR--QDPNVLINNNPSDLVGTWEVRDVIAGETIGTT--------------SVKLL--ESGSVQVKEPLEGL--TWRLDPGPTHLDTCTFQVL--SSDGTVLQYRGFLDRGARLEARFSKRPIRIRGSVQFKMR 551
BLAST of EWM21130.1 vs. NCBI_GenBank
Match: gi|1210515072|dbj|GAX26035.1| (hypothetical protein FisN_4Hh466 [Fistulifera solaris]) HSP 1 Score: 108.997 bits (271), Expect = 3.265e-21 Identity = 100/380 (26.32%), Postives = 155/380 (40.79%), Query Frame = 0 Query: 247 YTQAYARVLDTLLSNDCELRHSDSSALSTTASTDPPSPPLKVRPR--DRDICLSLYDTI---------------------------------------TGAPTKTKVLNTISNRVSRTMLYADEDDVAKLTNELTKGKPGFLEKWVGGEEGCDE-----------AVYYGALIAYL----TGGLEAPA--PAAMGGGYSNAYQRFTTSLVQELGTRSASVDP-------------EMFDAFVRWESTLRKNLTQD-MWDRHPKELTGQWTLVDSGPNPAGATTLPGPGAETGKGEQRSANLVFRRDGTLRVP-PELGMDGTWSFEPGPTHLDTIRFELRQGTPDNRVLCYTGYVDRGQRIETRFSKRPIKMKGRVVLRAR 553 Y +AY RV+ L +++ DP + K+ + D+DICLS+ D I P+ T+ LN+++N V R +L+ + ++ L L + F+++W G DE + L+ L T G+ P A+ Y+NAY+R S+V ELG+ P E F WE+T R+ D + + +P +L G W + D TT S L+ G+++V P G+ TW +PGPTHLDT F++ + D VL Y G++DRG R+E RFSKRPI+++G V + R Sbjct: 272 YDEAYKRVIAVL------------NSVGIVFEVDPETKRQKIASKIIDQDICLSMIDKIQLRNPVPDPVVANTLSSENTASEEDYQITKEDLGGVLLSAKEPSMTRQLNSLANIVERALLFGGDQELLVLAETLDADRAAFVDRWYPDTGGLDEDKPWDAERRPGVQFLNCLVHLLRDCYTNGVVTTLDPPFALANSYANAYERLVASVV-ELGSGYLKPVPSDILALPKPRTAQEELGRFAVWETTFRQRQDPDVLINNNPSDLVGTWEVRDVIAGETIGTT--------------SVKLL--ESGSVQVKEPLEGL--TWRLDPGPTHLDTCTFQVL--SSDGTVLQYRGFLDRGARLEARFSKRPIRIRGSVQFQMR 618
BLAST of EWM21130.1 vs. NCBI_GenBank
Match: gi|223998860|ref|XP_002289103.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976211|gb|EED94539.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 107.071 bits (266), Expect = 1.915e-20 Identity = 88/293 (30.03%), Postives = 126/293 (43.00%), Query Frame = 0 Query: 307 PTKTKVLNTISNRVSRTMLYADEDDVAKLTNELTKGKPGFLEKWVGGE---------EGCDEAVYYGALI-----AYLTGGLEAPAPAA-MGGGYSNAYQRFTTSLVQELGTRSASVDP-----------------------------EMFDAFVRWESTLRKNLTQDMWDRHPKELTGQWTLVDS-GPNPAGATTLPGPGAETGKGEQRSANLVFRRDGTLRV-PPELGMDGTWSFEPGPTHLDTIRFELRQGTPDNRVLCYTGYVDRGQRIETRFSKRPIKMKGRVVLRAR 553 PT T+ LN +SN V RT+++ + ++ L+ L KP F+++W E + ALI Y G + P + GY NAY R T SL+ ELG+ P E F F +WES++RKN T + +P++L G W + D G + G T + F+ G + V PP G+ W +PGPTHLDT F++ + D +L Y G+VDRG R E R SKR + M+G V R Sbjct: 527 PTMTRQLNILSNIVQRTLIFGGDQELLVLSETLDADKPAFIQRWYKNNPVDIADIKAEIRPGVQFLNALIQLLRDCYTKGVIYDVNPTLPLSTGYLNAYGRLTASLI-ELGSGYVRPSPNTSSLSLALNTPAATAKYLTSSPPPKSAKEEFGRFAKWESSVRKNRT----NPYPEDLVGTWKVEDMIGGSVIGTT-----------------QVSFKPQGEVSVLPPMQGL--RWRLDPGPTHLDTCTFQVL--SDDGAILQYKGFVDRGSRFEARVSKRSVSMRGGVSFLMR 793
BLAST of EWM21130.1 vs. NCBI_GenBank
Match: gi|219111621|ref|XP_002177562.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410447|gb|EEC50376.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 102.064 bits (253), Expect = 5.351e-19 Identity = 82/277 (29.60%), Postives = 126/277 (45.49%), Query Frame = 0 Query: 307 PTKTKVLNTISNRVSRTMLYADEDDVAKLTNELTKGKPGFLEKWVGGEEGCDEAV---------YYGALIAYL--------TGGLEAPAPAAMGGGYSNAYQRFTTSLVQELGTRS----ASVDP--------EMFDAFVRWESTLRKNLTQDMWDRHPKELTGQWTLVDSGPNPAGATTLPGPGAETGKGEQRSANLVFRRDGTLRVPPELGMDGT-WSFEPGPTHLDTIRFELRQGTPDNRVLCYTGYVDRGQRIETRFSKRPIKMKGRVVLRAR 553 P+ T+ LN +SN R +L+ + ++ L L + F+E+W G E + Y +I L L+ P P + Y+NAY+R + V ELG+ AS P E F WES R++ T D+ +P++L G W + D E G + +V + G++ V L M+G W +PGPTHLDT F++ D +L Y G++DRG R+E RFSKRP++++G V + R Sbjct: 438 PSMTRQLNVLSNIAQRALLFGGDQELLVLAETLDADRQAFVERWYPDTGGVQEDLVNETRPGIQYLNNVIQLLRNCYTNGMVNNLDPPLP--LLKSYANAYERLVATAV-ELGSGYLKPVASDRPVPIPRNAKEELGRFALWESNFRQS-TPDV-SCYPEDLEGSWEVRD----------------EIGGETIGLSTVVLKEQGSVEVA--LPMEGLRWRLDPGPTHLDTCTFQVLSN--DGTILQYRGFIDRGARLEARFSKRPLRIRGSVQFQMR 689
BLAST of EWM21130.1 vs. NCBI_GenBank
Match: gi|1072227645|gb|OEU12384.1| (hypothetical protein FRACYDRAFT_244649 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 98.5969 bits (244), Expect = 6.581e-18 Identity = 88/285 (30.88%), Postives = 129/285 (45.26%), Query Frame = 0 Query: 310 TKVLNTISNRVSRTMLYADEDDVAKLTNELTKGKPGFLEKWVGG-----EEGCDE----AVYYGALI-----AYLTGGLEAPAPAA-MGGGYSNAYQRFTTSLVQELGTRSASVDPEM---------------FDAFVRWESTLRKNLTQDMWDRHPKELTGQWTLVD-SGPNPAGATTLP-GPGAET---------GKGEQRSANLVFRRDGTLRVPPELGMDGTWSFEPGPTHLDTIRFELRQGTPDNRVLCYTGYVDRGQRIETRFSKRPIKMKGRVVLRAR 553 T LN +SN V R +L D+ ++ L+ L + F+++W E+ DE Y ALI AY G + P + YSN+Y+R SLV E+G S + PE F F WEST R ++D P++L G+W + D G G + L P + G + N F+ D + PP G+ W +PGPTHLDT F++ + D VL Y G++DRG R+E RFS R +++G V+ + R Sbjct: 405 TMQLNGLSNIVLRVLLLGDDQELLILSETLADNENSFVDRWYPDTSPLPEKMEDETRPGVQYLNALISLLRKAYKEGTVTTLEPITPLTKTYSNSYERLVASLV-EMG--SGYIRPEAENVMSMPKPRTALEEFGRFAVWESTFR---SRDDKPACPEDLEGEWEVKDIVGGETIGVSKLTFAPKVQVMLFVYPLMFSNGLKTIINNKFQGD-VMIAPPLQGLQ--WRLDPGPTHLDTCTFQVL--SEDGTVLQYRGFIDRGARLEARFSGRSTRIRGSVMFQMR 678 The following BLAST results are available for this feature:
BLAST of EWM21130.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 8
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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