EWM21130.1, cds9548 (CDS) Nannochloropsis gaditana

Overview
NameEWM21130.1
Unique Namecds9548
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:215969..216640 +
Alignment locationKK037254.1:216845..217936 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21130.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100041g18.3700.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:215969..216640 +
KK037254.1supercontigKK037254.1:216845..217936 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM21130.1 vs. NCBI_GenBank
Match: gi|585101197|gb|EWM21130.1| (hypothetical protein Naga_100041g18 [Nannochloropsis gaditana])

HSP 1 Score: 1199.11 bits (3101), Expect = 0.000e+0
Identity = 587/587 (100.00%), Postives = 587/587 (100.00%), Query Frame = 0
Query:    1 MSLLQKQGRRLGGKALRATRDAASSASPLARPWCRLPSDLTTTRSQVAATIFAVLLAVLKMESVGAWRVLPIGIPSGVSKMGSRVGHPTPLFTSPPQNVLPDPPLQEDSSASEITPSPVVQSFSPFLGRQRRRPGLLFEEEIDFCLAAPSLEGVSVGNSRVEIAKVVNTFVNQAAKKILIGFDCCFGEVADGVKDRLRTDFLSGDEASAEDRTCVEGACAFIDAVVALSPCSDLEVNATKGALVPPYTQAYARVLDTLLSNDCELRHSDSSALSTTASTDPPSPPLKVRPRDRDICLSLYDTITGAPTKTKVLNTISNRVSRTMLYADEDDVAKLTNELTKGKPGFLEKWVGGEEGCDEAVYYGALIAYLTGGLEAPAPAAMGGGYSNAYQRFTTSLVQELGTRSASVDPEMFDAFVRWESTLRKNLTQDMWDRHPKELTGQWTLVDSGPNPAGATTLPGPGAETGKGEQRSANLVFRRDGTLRVPPELGMDGTWSFEPGPTHLDTIRFELRQGTPDNRVLCYTGYVDRGQRIETRFSKRPIKMKGRVVLRARGEARSSGKFSMQLCKKNTLLENLVVGSTRGSVQE 587
            MSLLQKQGRRLGGKALRATRDAASSASPLARPWCRLPSDLTTTRSQVAATIFAVLLAVLKMESVGAWRVLPIGIPSGVSKMGSRVGHPTPLFTSPPQNVLPDPPLQEDSSASEITPSPVVQSFSPFLGRQRRRPGLLFEEEIDFCLAAPSLEGVSVGNSRVEIAKVVNTFVNQAAKKILIGFDCCFGEVADGVKDRLRTDFLSGDEASAEDRTCVEGACAFIDAVVALSPCSDLEVNATKGALVPPYTQAYARVLDTLLSNDCELRHSDSSALSTTASTDPPSPPLKVRPRDRDICLSLYDTITGAPTKTKVLNTISNRVSRTMLYADEDDVAKLTNELTKGKPGFLEKWVGGEEGCDEAVYYGALIAYLTGGLEAPAPAAMGGGYSNAYQRFTTSLVQELGTRSASVDPEMFDAFVRWESTLRKNLTQDMWDRHPKELTGQWTLVDSGPNPAGATTLPGPGAETGKGEQRSANLVFRRDGTLRVPPELGMDGTWSFEPGPTHLDTIRFELRQGTPDNRVLCYTGYVDRGQRIETRFSKRPIKMKGRVVLRARGEARSSGKFSMQLCKKNTLLENLVVGSTRGSVQE
Sbjct:    1 MSLLQKQGRRLGGKALRATRDAASSASPLARPWCRLPSDLTTTRSQVAATIFAVLLAVLKMESVGAWRVLPIGIPSGVSKMGSRVGHPTPLFTSPPQNVLPDPPLQEDSSASEITPSPVVQSFSPFLGRQRRRPGLLFEEEIDFCLAAPSLEGVSVGNSRVEIAKVVNTFVNQAAKKILIGFDCCFGEVADGVKDRLRTDFLSGDEASAEDRTCVEGACAFIDAVVALSPCSDLEVNATKGALVPPYTQAYARVLDTLLSNDCELRHSDSSALSTTASTDPPSPPLKVRPRDRDICLSLYDTITGAPTKTKVLNTISNRVSRTMLYADEDDVAKLTNELTKGKPGFLEKWVGGEEGCDEAVYYGALIAYLTGGLEAPAPAAMGGGYSNAYQRFTTSLVQELGTRSASVDPEMFDAFVRWESTLRKNLTQDMWDRHPKELTGQWTLVDSGPNPAGATTLPGPGAETGKGEQRSANLVFRRDGTLRVPPELGMDGTWSFEPGPTHLDTIRFELRQGTPDNRVLCYTGYVDRGQRIETRFSKRPIKMKGRVVLRARGEARSSGKFSMQLCKKNTLLENLVVGSTRGSVQE 587          
BLAST of EWM21130.1 vs. NCBI_GenBank
Match: gi|298707676|emb|CBJ25993.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 219.55 bits (558), Expect = 3.084e-61
Identity = 162/460 (35.22%), Postives = 224/460 (48.70%), Query Frame = 0
Query:  138 FEEEIDFCLAAPSLEGVSVGNSRVEIAKVVNTFVNQAAKKILIGFDCCFGEVADGVKDRLRTDFLSGDEASAEDRTCVEGACAFIDAV--VALSPCSDLEVNATKGALVPPYTQAYARVLDTLLSNDCELRHSDSSALSTTASTDPPSPPLKVRPRDRDICLSLYDTITGA-----PTKTKVLNTISNRVSRTMLYADEDDVAKLTNELTKGKPGFLEKWVG--GEEGCDEAVYYGALIAYLTGGLEAPAPAAMGGGYSNAYQRFTTSLVQELGTRSASVDPEMFDAFVRWESTLRKNLTQDMWDRHPKELTGQWTLVDSGPNPAGATTLP------GPGAETGKGEQRSANLV--FRRDGTLRVPPELGMDGTWSFEPGPTHLDTIRFELRQGTPDNR-----------VLCYTGYVDRGQRIETRFSKRPIKMKGRVVLRARGEARSSGKFSMQLCKK 569
            F  E++FCL  PS + V  G S   + K +NT  N+  K +LI       E A     ++  DF    +A   +      A A++  V  +A+  C  +E   T  AL   Y  A+ RV   L    C +   D SA              ++RP D+DICLS+ D    A      T T+ LNT+ NRV RT+    ++D+  L  E+      F+ K  G    +G  E ++Y AL+  +  GL      A+ G Y N+YQR    LVQE+GTRS      +  +F+ WE  +RK LT+  W   P +L G W L  SG +  G T LP      G G   G  +   ++LV  FR+DGT+++P E G+   W  EPGPTHLDTI FE+    P  +            L YTGYVDRG RIE RFSKR +KM GR+    RG+ R S +F+M+L  +
Sbjct:   34 FMGELNFCLG-PS-DSVLSGPS---LLKDLNTATNKIVKNLLILNSPEDSEPAMRDALKIEADF----DAQHSESPQYPAAKAYLSCVRQLAIEGCPAVE---TLDALSEVYKPAFRRVAGALSDFGCTITPGDDSAG-------------RIRPVDKDICLSILDYAVPAREQEGTTPTRALNTLVNRVVRTVCVGSDEDLQALAREMESKHNKFMTKCFGKGSWQGTQEDMFYHALVNLVKNGLTDEGVPALSGAYLNSYQRLMGILVQEVGTRSTPASEMVLKSFLAWEREIRKELTEPAWKSRPSDLVGSWALNTSGWD--GLTDLPVDSSAAGGGTTDGMVDLGLSDLVVSFRKDGTVQIPVEKGVGLQWRVEPGPTHLDTIYFEMIPAAPKVKASSKAGAGGATTLSYTGYVDRGARIEARFSKRFLKMTGRMTSVERGQERPSTRFAMRLVAR 466          
BLAST of EWM21130.1 vs. NCBI_GenBank
Match: gi|397647658|gb|EJK77799.1| (hypothetical protein THAOC_00345 [Thalassiosira oceanica])

HSP 1 Score: 113.235 bits (282), Expect = 1.924e-22
Identity = 92/291 (31.62%), Postives = 131/291 (45.02%), Query Frame = 0
Query:  307 PTKTKVLNTISNRVSRTMLYADEDDVAKLTNELTKGKPGFLEKWVGGE--EGCDE-------AVYYGALI-----AYLTGGLEAPAPAA-MGGGYSNAYQRFTTSLVQELGT------------------------RSASVDP----EMFDAFVRWESTLRKNLTQDMWDRHPKELTGQWTLVDSGPNPAGATTLPGPGAETGKGEQRSANLVFRRDGTLRV-PPELGMDGTWSFEPGPTHLDTIRFELRQGTPDNRVLCYTGYVDRGQRIETRFSKRPIKMKGRVVLRAR 553
            PT T+ LN +SN V RT+++  + ++  L   +   KP F+++W  G+  E  D          Y  +LI      Y  G L    P   +  GY N+Y R T SL+ ELG+                         S++  P    E  + F +WEST+RKN      + +P +L G WT+ D      G  T+       G  E     +VF   G L V PP  G+   W  + GPTHLDT  F++   + D  +L Y G+VDRG R+E R SKR + M+G V    R
Sbjct:  428 PTMTRQLNVLSNIVQRTLIFGGDQELLVLAETMDADKPAFIQRWYSGDSAEVADRMNETRSGVQYLNSLIQLLRDCYTKGVLRNVEPTLPLSSGYKNSYSRLTASLI-ELGSGYVRPSASSSLSLALTTTAATAQYLSSTTPPKSAREELNRFAQWESTVRKNRA----NPYPDDLVGTWTVEDI----VGFQTV-------GTSE-----VVFEPQGKLTVKPPLQGL--RWRLDAGPTHLDTCTFQVL--SDDGAILQYKGFVDRGSRLEARVSKRSVSMRGGVSFLMR 693          
BLAST of EWM21130.1 vs. NCBI_GenBank
Match: gi|1210516856|dbj|GAX24345.1| (hypothetical protein FisN_4Lh466 [Fistulifera solaris])

HSP 1 Score: 108.612 bits (270), Expect = 3.250e-21
Identity = 101/382 (26.44%), Postives = 156/382 (40.84%), Query Frame = 0
Query:  247 YTQAYARVLDTLLSNDCELRHSDSSALSTTASTDPPSPPLKVRPR--DRDICLSLYDTI---------------------------------------TGAPTKTKVLNTISNRVSRTMLYADEDDVAKLTNELTKGKPGFLEKWVGGEEGCDE-----------AVYYGALIAYL----TGGLEAPA--PAAMGGGYSNAYQRFTTSLVQELGTRSASVDP-------------EMFDAFVRWESTLRKNLTQD---MWDRHPKELTGQWTLVDSGPNPAGATTLPGPGAETGKGEQRSANLVFRRDGTLRVP-PELGMDGTWSFEPGPTHLDTIRFELRQGTPDNRVLCYTGYVDRGQRIETRFSKRPIKMKGRVVLRAR 553
            Y +AY RV+  L            +++      DP +   K+  +  D+DICLS+ D I                                          P+ T+ LN+++N V R +L+  + ++  L   L   +  F+++W     G DE             +   L+  L    T G+      P A+   Y+NAY+R   S+V ELG+      P             E    F  WE+T R+   QD   + + +P +L G W + D        TT              S  L+    G+++V  P  G+  TW  +PGPTHLDT  F++   + D  VL Y G++DRG R+E RFSKRPI+++G V  + R
Sbjct:  205 YDEAYKRVIAVL------------NSVGIVFEVDPETKRQKIASKIIDQDICLSMIDKIQLRNPVPDLEVANTLPSDNTTSEEDYKITKEDLGGVLLSAKEPSMTRQLNSLANIVERALLFGGDQELIVLAETLDADRAAFIDRWYPNTGGLDEDRPWDAERRPGVQFLNCLVHLLRDCYTNGVVTTLDPPFALANSYANAYERLVASVV-ELGSGYLKPVPNDILALPKPRTAQEELGRFAVWETTFRQR--QDPNVLINNNPSDLVGTWEVRDVIAGETIGTT--------------SVKLL--ESGSVQVKEPLEGL--TWRLDPGPTHLDTCTFQVL--SSDGTVLQYRGFLDRGARLEARFSKRPIRIRGSVQFKMR 551          
BLAST of EWM21130.1 vs. NCBI_GenBank
Match: gi|1210515072|dbj|GAX26035.1| (hypothetical protein FisN_4Hh466 [Fistulifera solaris])

HSP 1 Score: 108.997 bits (271), Expect = 3.265e-21
Identity = 100/380 (26.32%), Postives = 155/380 (40.79%), Query Frame = 0
Query:  247 YTQAYARVLDTLLSNDCELRHSDSSALSTTASTDPPSPPLKVRPR--DRDICLSLYDTI---------------------------------------TGAPTKTKVLNTISNRVSRTMLYADEDDVAKLTNELTKGKPGFLEKWVGGEEGCDE-----------AVYYGALIAYL----TGGLEAPA--PAAMGGGYSNAYQRFTTSLVQELGTRSASVDP-------------EMFDAFVRWESTLRKNLTQD-MWDRHPKELTGQWTLVDSGPNPAGATTLPGPGAETGKGEQRSANLVFRRDGTLRVP-PELGMDGTWSFEPGPTHLDTIRFELRQGTPDNRVLCYTGYVDRGQRIETRFSKRPIKMKGRVVLRAR 553
            Y +AY RV+  L            +++      DP +   K+  +  D+DICLS+ D I                                          P+ T+ LN+++N V R +L+  + ++  L   L   +  F+++W     G DE             +   L+  L    T G+      P A+   Y+NAY+R   S+V ELG+      P             E    F  WE+T R+    D + + +P +L G W + D        TT              S  L+    G+++V  P  G+  TW  +PGPTHLDT  F++   + D  VL Y G++DRG R+E RFSKRPI+++G V  + R
Sbjct:  272 YDEAYKRVIAVL------------NSVGIVFEVDPETKRQKIASKIIDQDICLSMIDKIQLRNPVPDPVVANTLSSENTASEEDYQITKEDLGGVLLSAKEPSMTRQLNSLANIVERALLFGGDQELLVLAETLDADRAAFVDRWYPDTGGLDEDKPWDAERRPGVQFLNCLVHLLRDCYTNGVVTTLDPPFALANSYANAYERLVASVV-ELGSGYLKPVPSDILALPKPRTAQEELGRFAVWETTFRQRQDPDVLINNNPSDLVGTWEVRDVIAGETIGTT--------------SVKLL--ESGSVQVKEPLEGL--TWRLDPGPTHLDTCTFQVL--SSDGTVLQYRGFLDRGARLEARFSKRPIRIRGSVQFQMR 618          
BLAST of EWM21130.1 vs. NCBI_GenBank
Match: gi|223998860|ref|XP_002289103.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976211|gb|EED94539.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 107.071 bits (266), Expect = 1.915e-20
Identity = 88/293 (30.03%), Postives = 126/293 (43.00%), Query Frame = 0
Query:  307 PTKTKVLNTISNRVSRTMLYADEDDVAKLTNELTKGKPGFLEKWVGGE---------EGCDEAVYYGALI-----AYLTGGLEAPAPAA-MGGGYSNAYQRFTTSLVQELGTRSASVDP-----------------------------EMFDAFVRWESTLRKNLTQDMWDRHPKELTGQWTLVDS-GPNPAGATTLPGPGAETGKGEQRSANLVFRRDGTLRV-PPELGMDGTWSFEPGPTHLDTIRFELRQGTPDNRVLCYTGYVDRGQRIETRFSKRPIKMKGRVVLRAR 553
            PT T+ LN +SN V RT+++  + ++  L+  L   KP F+++W             E      +  ALI      Y  G +    P   +  GY NAY R T SL+ ELG+      P                             E F  F +WES++RKN T    + +P++L G W + D  G +  G T                  + F+  G + V PP  G+   W  +PGPTHLDT  F++   + D  +L Y G+VDRG R E R SKR + M+G V    R
Sbjct:  527 PTMTRQLNILSNIVQRTLIFGGDQELLVLSETLDADKPAFIQRWYKNNPVDIADIKAEIRPGVQFLNALIQLLRDCYTKGVIYDVNPTLPLSTGYLNAYGRLTASLI-ELGSGYVRPSPNTSSLSLALNTPAATAKYLTSSPPPKSAKEEFGRFAKWESSVRKNRT----NPYPEDLVGTWKVEDMIGGSVIGTT-----------------QVSFKPQGEVSVLPPMQGL--RWRLDPGPTHLDTCTFQVL--SDDGAILQYKGFVDRGSRFEARVSKRSVSMRGGVSFLMR 793          
BLAST of EWM21130.1 vs. NCBI_GenBank
Match: gi|219111621|ref|XP_002177562.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410447|gb|EEC50376.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 102.064 bits (253), Expect = 5.351e-19
Identity = 82/277 (29.60%), Postives = 126/277 (45.49%), Query Frame = 0
Query:  307 PTKTKVLNTISNRVSRTMLYADEDDVAKLTNELTKGKPGFLEKWVGGEEGCDEAV---------YYGALIAYL--------TGGLEAPAPAAMGGGYSNAYQRFTTSLVQELGTRS----ASVDP--------EMFDAFVRWESTLRKNLTQDMWDRHPKELTGQWTLVDSGPNPAGATTLPGPGAETGKGEQRSANLVFRRDGTLRVPPELGMDGT-WSFEPGPTHLDTIRFELRQGTPDNRVLCYTGYVDRGQRIETRFSKRPIKMKGRVVLRAR 553
            P+ T+ LN +SN   R +L+  + ++  L   L   +  F+E+W     G  E +         Y   +I  L           L+ P P  +   Y+NAY+R   + V ELG+      AS  P        E    F  WES  R++ T D+   +P++L G W + D                E G      + +V +  G++ V   L M+G  W  +PGPTHLDT  F++     D  +L Y G++DRG R+E RFSKRP++++G V  + R
Sbjct:  438 PSMTRQLNVLSNIAQRALLFGGDQELLVLAETLDADRQAFVERWYPDTGGVQEDLVNETRPGIQYLNNVIQLLRNCYTNGMVNNLDPPLP--LLKSYANAYERLVATAV-ELGSGYLKPVASDRPVPIPRNAKEELGRFALWESNFRQS-TPDV-SCYPEDLEGSWEVRD----------------EIGGETIGLSTVVLKEQGSVEVA--LPMEGLRWRLDPGPTHLDTCTFQVLSN--DGTILQYRGFIDRGARLEARFSKRPLRIRGSVQFQMR 689          
BLAST of EWM21130.1 vs. NCBI_GenBank
Match: gi|1072227645|gb|OEU12384.1| (hypothetical protein FRACYDRAFT_244649 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 98.5969 bits (244), Expect = 6.581e-18
Identity = 88/285 (30.88%), Postives = 129/285 (45.26%), Query Frame = 0
Query:  310 TKVLNTISNRVSRTMLYADEDDVAKLTNELTKGKPGFLEKWVGG-----EEGCDE----AVYYGALI-----AYLTGGLEAPAPAA-MGGGYSNAYQRFTTSLVQELGTRSASVDPEM---------------FDAFVRWESTLRKNLTQDMWDRHPKELTGQWTLVD-SGPNPAGATTLP-GPGAET---------GKGEQRSANLVFRRDGTLRVPPELGMDGTWSFEPGPTHLDTIRFELRQGTPDNRVLCYTGYVDRGQRIETRFSKRPIKMKGRVVLRAR 553
            T  LN +SN V R +L  D+ ++  L+  L   +  F+++W        E+  DE      Y  ALI     AY  G +    P   +   YSN+Y+R   SLV E+G  S  + PE                F  F  WEST R   ++D     P++L G+W + D  G    G + L   P  +            G +   N  F+ D  +  PP  G+   W  +PGPTHLDT  F++   + D  VL Y G++DRG R+E RFS R  +++G V+ + R
Sbjct:  405 TMQLNGLSNIVLRVLLLGDDQELLILSETLADNENSFVDRWYPDTSPLPEKMEDETRPGVQYLNALISLLRKAYKEGTVTTLEPITPLTKTYSNSYERLVASLV-EMG--SGYIRPEAENVMSMPKPRTALEEFGRFAVWESTFR---SRDDKPACPEDLEGEWEVKDIVGGETIGVSKLTFAPKVQVMLFVYPLMFSNGLKTIINNKFQGD-VMIAPPLQGLQ--WRLDPGPTHLDTCTFQVL--SEDGTVLQYRGFIDRGARLEARFSGRSTRIRGSVMFQMR 678          
The following BLAST results are available for this feature:
BLAST of EWM21130.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 8
Match NameE-valueIdentityDescription
gi|585101197|gb|EWM21130.1|0.000e+0100.00hypothetical protein Naga_100041g18 [Nannochlorops... [more]
gi|298707676|emb|CBJ25993.1|3.084e-6135.22conserved unknown protein [Ectocarpus siliculosus][more]
gi|397647658|gb|EJK77799.1|1.924e-2231.62hypothetical protein THAOC_00345 [Thalassiosira oc... [more]
gi|1210516856|dbj|GAX24345.1|3.250e-2126.44hypothetical protein FisN_4Lh466 [Fistulifera sola... [more]
gi|1210515072|dbj|GAX26035.1|3.265e-2126.32hypothetical protein FisN_4Hh466 [Fistulifera sola... [more]
gi|223998860|ref|XP_002289103.1|1.915e-2030.03predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|219111621|ref|XP_002177562.1|5.351e-1929.60predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1072227645|gb|OEU12384.1|6.581e-1830.88hypothetical protein FRACYDRAFT_244649 [Fragilario... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9579rna9579Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications