EWM21128.1, cds9535 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21128.1 vs. NCBI_GenBank
Match: gi|585101195|gb|EWM21128.1| (poly binding cytoplasmic isoform cra_c [Nannochloropsis gaditana]) HSP 1 Score: 468.774 bits (1205), Expect = 3.211e-167 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0
Query: 1 MPPHTSLIHYSAPEVAAKAIEALNGQELDNRKLHVREDRSYLDSAEGVVVFVGNLPWSVTSEALQELFKEYNPLDVHVKTNMAGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDRQQAEAGEGEGVGNGGPVGGLTDRVTLTNLAWTTEEGELVSLLSKAGTVVGVEIQRHADTGRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMKFYSTTGGRRT 229
MPPHTSLIHYSAPEVAAKAIEALNGQELDNRKLHVREDRSYLDSAEGVVVFVGNLPWSVTSEALQELFKEYNPLDVHVKTNMAGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDRQQAEAGEGEGVGNGGPVGGLTDRVTLTNLAWTTEEGELVSLLSKAGTVVGVEIQRHADTGRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMKFYSTTGGRRT
Sbjct: 1 MPPHTSLIHYSAPEVAAKAIEALNGQELDNRKLHVREDRSYLDSAEGVVVFVGNLPWSVTSEALQELFKEYNPLDVHVKTNMAGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDRQQAEAGEGEGVGNGGPVGGLTDRVTLTNLAWTTEEGELVSLLSKAGTVVGVEIQRHADTGRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMKFYSTTGGRRT 229
BLAST of EWM21128.1 vs. NCBI_GenBank
Match: gi|585102973|gb|EWM22467.1| (rna binding protein [Nannochloropsis gaditana]) HSP 1 Score: 191.815 bits (486), Expect = 3.223e-56 Identity = 93/216 (43.06%), Postives = 142/216 (65.74%), Query Frame = 0
Query: 6 SLIHYSAPEVAAKAIEALNGQELDNRKLHVREDRSYLDSAEGVVVFVGNLPWSVTSEALQELFKEYNPLDVHVKTNMAGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDRQQAEAGEGEGVGNGGPVGGLTDRVTLTNLAWTTEEGELVSLLSKAGTVVGVEIQRHADTGRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMKFY 221
+L+ + E A++A+E L G+E++ R L+VREDR+ ++ EG VVFVGNLPW +T+ L+ +F E++P DVH+KTNM+GRSRGF L++F +E A AI ++G ++ R I VR DR E +G+ +D VT N+ W T + L +++AG VV +IQRHADT RSKGWAI + + +E NA+ +L++TV+ R ++++FY
Sbjct: 47 ALVTFETAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFSPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDRAHLEM-----MGHSPATMEASDTVTCGNIPWHTGDEVLACHMAQAGRVVSCQIQRHADTLRSKGWAIIRYVTVEEGTNAVRSLHRTVLDDRTLNVRFY 257 HSP 2 Score: 76.2554 bits (186), Expect = 1.088e-12 Identity = 59/173 (34.10%), Postives = 90/173 (52.02%), Query Frame = 0
Query: 50 VFVGNLPWSVTSEALQELFKEY-NPLDVHVKTNM-AGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDRQQAEAGEGEGVGNGGPVGGLTDRVTLTNLAWTTEEGELVSLLSKAGTVVGVEIQRHADTGRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMKF 220
VFVGNL W T+++L + + L V V+ + GRS+G+ALV F AE A A+ L G ++EGRP+ VR DR + E EG V G NL W L ++ S+ + V I+ + +GRS+G+ + F S +EA AI ++ V++R I ++
Sbjct: 5 VFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVG-------------NLPWDMTASGLRTVFSEF-SPYDVHIKTNM-SGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRL 162 HSP 3 Score: 67.0106 bits (162), Expect = 2.202e-9 Identity = 31/77 (40.26%), Postives = 49/77 (63.64%), Query Frame = 0
Query: 143 LTDRVTLTNLAWTTEEGELVSLLSKAGTVVGVEIQRHADTGRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMK 219
++ V + NL+W T L +++ AG V+GVE+Q H+DTGRSKGWA+ TF + ++A A+ L V RP+ ++
Sbjct: 1 MSKTVFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVR 77
BLAST of EWM21128.1 vs. NCBI_GenBank
Match: gi|299471941|emb|CBN79621.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 160.614 bits (405), Expect = 4.946e-44 Identity = 93/265 (35.09%), Postives = 133/265 (50.19%), Query Frame = 0
Query: 7 LIHYSAPEVAAKAIEALNGQELDNRKLHVREDRSYLDSAEGVVVFVGNLPWSVTSEALQELFKEYNPLDVHVKTNMAGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDRQ---------------------------------------------------QAEAGEGEGVGNGGPVGGLTDRVTLTNLAWTTEEGELVSLLSKAGTVVGVEIQRHADTGRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMKF 220
L+ Y+ P +A AIE LN +L R +H+R DR ++++ G VFVGNLPWS T E LQ++F Y P D HVKTNMAGRSRGF +++F E+ AI+ + YQ++ RPIQVR DR+ + GE E GG GG V + NLAW T + +L++ AG VV +Q A +GRSKGW + ++S E A+ LN T++ +R ++++
Sbjct: 97 LVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDREIGGGGEGGGGGGGGGRRGRGSSGGGGGGGGGGGGGDGGGGGGGEPCPGFGGKPRGGEKEEKLFGG-GGGDACTVFVGNLAWGTTDDDLLATFQTAGAVVSAHVQ-IAPSGRSKGWGLVKYSSPTETETAVTELNNTMLHERRLTVRL 359 HSP 2 Score: 79.337 bits (194), Expect = 9.781e-14 Identity = 56/175 (32.00%), Postives = 84/175 (48.00%), Query Frame = 0
Query: 50 VFVGNLPWSVTSEALQELFKEYNPL-DVHVKTNM-AGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDRQQAEAGEGEGVGNGGPVGGLTDRVTLTNLAWTTEEGELVSLLSKAGTVVGVEIQRHADT---GRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMK 219
VFVGNL W TSE L+ + V+++ +GRS+G+ LV + D +A AI LN L GRPI +R DR++ EA GG V + NL W+T + +L + + H T GRS+G+ I FA+ + AI+ + + RPI ++
Sbjct: 54 VFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEAS-----------GGFP--VFVGNLPWSTTDEDLQQIFAPY-----EPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVR 210 HSP 3 Score: 60.4622 bits (145), Expect = 3.433e-7 Identity = 30/74 (40.54%), Postives = 42/74 (56.76%), Query Frame = 0
Query: 147 VTLTNLAWTTEEGELVSLLSKAGTVVGVEIQRHADTGRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMKF 220
V + NL+W T +L + + G VV E+Q HAD+GRSKGW + T+A A AI LN + RPI ++
Sbjct: 54 VFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRL 127
BLAST of EWM21128.1 vs. NCBI_GenBank
Match: gi|553179889|ref|XP_005852780.1| (hypothetical protein NGA_0682100 [Nannochloropsis gaditana CCMP526] >gi|422295750|gb|EKU23049.1| hypothetical protein NGA_0682100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 133.65 bits (335), Expect = 3.993e-35 Identity = 65/151 (43.05%), Postives = 97/151 (64.24%), Query Frame = 0
Query: 6 SLIHYSAPEVAAKAIEALNGQELDNRKLHVREDRSYLDSAEGVVVFVGNLPWSVTSEALQELFKEYNPLDVHVKTNMAGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDRQQAEAGEGEGVGNGGPVGGLTDRVTLTNLAWTT 156
+L+ + E A++A+E L G+E++ R L+VREDR+ ++ EG VVFVGNLPW +T+ L+ +F E++P DVH+KTNM+GRSRGF L++F +E A AI ++G ++ R I VR DR E +G+ +D VT N+ W T
Sbjct: 47 ALVTFETAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFSPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDRAHLEM-----MGHSPATMEASDTVTCGNIPWHT 192 HSP 2 Score: 76.2554 bits (186), Expect = 2.712e-13 Identity = 59/173 (34.10%), Postives = 90/173 (52.02%), Query Frame = 0
Query: 50 VFVGNLPWSVTSEALQELFKEYNP-LDVHVKTNM-AGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDRQQAEAGEGEGVGNGGPVGGLTDRVTLTNLAWTTEEGELVSLLSKAGTVVGVEIQRHADTGRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMKF 220
VFVGNL W T+++L + + L V V+ + GRS+G+ALV F AE A A+ L G ++EGRP+ VR DR + E EG V G NL W L ++ S+ + V I+ + +GRS+G+ + F S +EA AI ++ V++R I ++
Sbjct: 5 VFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVG-------------NLPWDMTASGLRTVFSEF-SPYDVHIKTNM-SGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRL 162 HSP 3 Score: 66.6254 bits (161), Expect = 8.641e-10 Identity = 31/77 (40.26%), Postives = 49/77 (63.64%), Query Frame = 0
Query: 143 LTDRVTLTNLAWTTEEGELVSLLSKAGTVVGVEIQRHADTGRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMK 219
++ V + NL+W T L +++ AG V+GVE+Q H+DTGRSKGWA+ TF + ++A A+ L V RP+ ++
Sbjct: 1 MSKTVFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVR 77
BLAST of EWM21128.1 vs. NCBI_GenBank
Match: gi|255089439|ref|XP_002506641.1| (predicted protein [Micromonas commoda] >gi|226521914|gb|ACO67899.1| predicted protein [Micromonas commoda]) HSP 1 Score: 115.161 bits (287), Expect = 1.836e-27 Identity = 74/232 (31.90%), Postives = 108/232 (46.55%), Query Frame = 0
Query: 7 LIHYSAPEVAAKAIEALNGQELDNRKLHVREDRSYLDSA-----------------EGVVVFVGNLPWSVTSEALQELFKEYNPL-DVHVKTNMAGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDRQQAEAGEGEGVGNGGPVGGLTDRVTLTNLAWTTEEGELVSLLSKAGTVVGVEIQRHADTGRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMKF 220
++ YS A AI+ L+G L +R + VRED++ SA +G +VGNL W E+L + + V GRS+G+ LV F + A AI L+ L+GR I VR +R A + G G P ++ + NL W+T +L + + GTV+ E HADTGRSKGW F +R++A AI N + RP+ +K
Sbjct: 51 IVEYSNVNEAQVAIQTLDGHTLGDRNITVREDKAPTKSAPSKSGGNRSTIGDTPAADGCRCYVGNLAWETNEESLIAHCSQVGTVVQAEVAKQPGGRSKGWGLVDFETPDAANSAINTLHNSDLQGRSIIVRLERAGG-ANKSGGPNAGRPEASSGLQIVVRNLPWSTTSEDLRQVFQQVGTVIKAEAVCHADTGRSKGWGTVLFETREQAQAAIQGFNGVELEHRPMQIKL 281 HSP 2 Score: 105.916 bits (263), Expect = 6.652e-24 Identity = 63/185 (34.05%), Postives = 101/185 (54.59%), Query Frame = 0
Query: 50 VFVGNLPWSVTSEALQELFKEYNPLD-VHVKTNMAGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDRQQAEAGEGEGVGNGGPVGGLT----DRVTLTNLAWTTEEGELVSLLSKAGTVVGVEIQRHADTGRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMKFYSTTGGRRT 229
++VGN+PWS T + L+ +F + V + T GRSRG+ +V++++ A VAI L+G+ L R I VR D+ ++ + GN +G R + NLAW T E L++ S+ GTVV E+ + GRSKGW + F + D A +AINTL+ + ++ R I ++ G ++
Sbjct: 9 LYVGNIPWSTTVDELRGIFSGCGTITLVDIPTGRQGRSRGYGIVEYSNVNEAQVAIQTLDGHTLGDRNITVREDKAPTKSAPSKSGGNRSTIGDTPAADGCRCYVGNLAWETNEESLIAHCSQVGTVVQAEVAKQPG-GRSKGWGLVDFETPDAANSAINTLHNSDLQGRSIIVRLERAGGANKS 192 HSP 3 Score: 74.3294 bits (181), Expect = 3.000e-12 Identity = 44/134 (32.84%), Postives = 69/134 (51.49%), Query Frame = 0
Query: 7 LIHYSAPEVAAKAIEALNGQELDNRKLHVREDRS------------YLDSAEGVVVFVGNLPWSVTSEALQELFKEYNPLD-----VHVKTNMAGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDR 123
L+ + P+ A AI L+ +L R + VR +R+ +++ G+ + V NLPWS TSE L+++F++ + H T GRS+G+ V F E A AI NG +LE RP+Q++ DR
Sbjct: 153 LVDFETPDAANSAINTLHNSDLQGRSIIVRLERAGGANKSGGPNAGRPEASSGLQIVVRNLPWSTTSEDLRQVFQQVGTVIKAEAVCHADT---GRSKGWGTVLFETREQAQAAIQGFNGVELEHRPMQIKLDR 283
BLAST of EWM21128.1 vs. NCBI_GenBank
Match: gi|303284108|ref|XP_003061345.1| (hypothetical protein MICPUCDRAFT_60999 [Micromonas pusilla CCMP1545] >gi|226457696|gb|EEH54995.1| hypothetical protein MICPUCDRAFT_60999 [Micromonas pusilla CCMP1545]) HSP 1 Score: 110.923 bits (276), Expect = 1.270e-25 Identity = 77/246 (31.30%), Postives = 110/246 (44.72%), Query Frame = 0
Query: 7 LIHYSAPEVAAKAIEALNGQELDNRKLHVREDRSYLDS------------------------AEGVVVFVGNLPWSVTSEALQELFKEY-------NPLDVHVKTNMAGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDRQQAEAGEGEGVGNGG-PVGGLTDRVTLTNLAWTTEEGELVSLLSKAGTVVGVEIQRHADTGRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMKF 220
++ YS+ A AI L G L +R L VRED + + AEG ++GNL W T+E+L F++Y + ++ V GRS+G+ LV F A AI L+ L+GR I VR +R G N G P ++ + NL WTT +L + + G VV + HADTGRSKGW F +R++A AI N + RP+ +K
Sbjct: 52 IVEYSSAAEAQAAIAQLEGHTLGDRNLTVREDNAPTKTANSGGGSKSGGGRGSGNVMGETPAAEGCRCYIGNLAWETTAESLVGAFEDYPHFSSVGSVVNAEVAKQPGGRSKGWGLVDFESPAAAESAIATLHNSDLQGRSIIVRLERAGGATKGPGGGANAGRPEASSGLQIVVRNLPWTTTSEDLRQVFQQVGNVVKADAVCHADTGRSKGWGTVLFETREQAQAAIQGFNGVELESRPMQIKL 297 HSP 2 Score: 71.2478 bits (173), Expect = 4.875e-11 Identity = 43/136 (31.62%), Postives = 69/136 (50.74%), Query Frame = 0
Query: 7 LIHYSAPEVAAKAIEALNGQELDNRKLHVREDRSYL--------------DSAEGVVVFVGNLPWSVTSEALQELFKEYNPLD-----VHVKTNMAGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDR 123
L+ + +P A AI L+ +L R + VR +R+ +++ G+ + V NLPW+ TSE L+++F++ + H T GRS+G+ V F E A AI NG +LE RP+Q++ DR
Sbjct: 167 LVDFESPAAAESAIATLHNSDLQGRSIIVRLERAGGATKGPGGGANAGRPEASSGLQIVVRNLPWTTTSEDLRQVFQQVGNVVKADAVCHADT---GRSKGWGTVLFETREQAQAAIQGFNGVELESRPMQIKLDR 299 HSP 3 Score: 67.3958 bits (163), Expect = 1.098e-9 Identity = 58/191 (30.37%), Postives = 86/191 (45.03%), Query Frame = 0
Query: 50 VFVGNLPWSVTSEALQELFKEYNPL-DVHVKTNMAGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDRQQAEAGEGEG-------------VGNGGPVGGLTDRVTLTNLAWTTEEGELVSL------LSKAGTVVGVEIQRHADTGRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMKF 220
++VGNLPWS + L+ +F + V + GRSRG+ +V+++ A A AI L G+ L R + VR D + G +G G R + NLAW T LV S G+VV E+ + GRSKGW + F S A +AI TL+ + ++ R I ++
Sbjct: 10 LYVGNLPWSTDVDELRAIFSSCGAITHVDIPKGRQGRSRGYGIVEYSSAAEAQAAIAQLEGHTLGDRNLTVREDNAPTKTANSGGGSKSGGGRGSGNVMGETPAAEGC--RCYIGNLAWETTAESLVGAFEDYPHFSSVGSVVNAEVAKQPG-GRSKGWGLVDFESPAAAESAIATLHNSDLQGRSIIVRL 197
BLAST of EWM21128.1 vs. NCBI_GenBank
Match: gi|145354241|ref|XP_001421399.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144581636|gb|ABO99692.1| predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 104.76 bits (260), Expect = 1.676e-23 Identity = 69/195 (35.38%), Postives = 98/195 (50.26%), Query Frame = 0
Query: 42 LDSAEGVVVFVGNLPWSVTSEALQELFKEYNPLD-VHVKTNMAGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDR-----QQAEAGEGEGVGNGGPVGGLTDRVTLTNLAWTTEEGELVSLLSKAG-TVVGVEIQRHADTGRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMKFYSTTGGRRT 229
+D ++VGN+PWS T E L+ELF E + V + T GRSRG+ LV+F A A+T ++G L R I VR D+ V P GG R NLAW T E L S + G VV E+ R + GRSKGWA+ FA+ +EA NAI ++ + ++ R I ++ G+++
Sbjct: 3 VDGGSSARLYVGNIPWSTTIEDLRELFAECGGVTRVDIPTGRQGRSRGYGLVEFNSEAEAQAAVTRMDGTPLGDRTITVREDKAPTKAAGGAKKASASVLGDAPAGGDGCRCYFGNLAWETSEETLTSHCASFGVNVVQCEVARQSG-GRSKGWALVDFATPEEAQNAIEQMHNSEIQGRSIIVRVERPGAGQKS 196 HSP 2 Score: 95.9005 bits (237), Expect = 3.385e-20 Identity = 69/234 (29.49%), Postives = 106/234 (45.30%), Query Frame = 0
Query: 7 LIHYSAPEVAAKAIEALNGQELDNRKLHVREDRS--------------YLDSA----EGVVVFVGNLPWSVTSEALQELFKEY--NPLDVHVKTNMAGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDRQQAEAGEGEGVGNGGPVGGLTDRVTLTNLAWTTEEGELVSLLSKAGTVVGVEIQRHADTGRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMKF 220
L+ +++ A A+ ++G L +R + VRED++ L A +G + GNL W + E L + N + V GRS+G+ALV F E A AI ++ +++GR I VR +R AG+ P ++ + NL WTT +L + + G VV H DTGRSKGW F +R++A AI N + RP+ +K
Sbjct: 53 LVEFNSEAEAQAAVTRMDGTPLGDRTITVREDKAPTKAAGGAKKASASVLGDAPAGGDGCRCYFGNLAWETSEETLTSHCASFGVNVVQCEVARQSGGRSKGWALVDFATPEEAQNAIEQMHNSEIQGRSIIVRVER--PGAGQKSARVETRPENSSGLQIVVRNLPWTTTSEDLRQVFQQVGNVVNAVAVCHTDTGRSKGWGTVLFETREQAQAAIQGFNGVELEHRPMQIKL 284 HSP 3 Score: 76.2554 bits (186), Expect = 6.720e-13 Identity = 44/134 (32.84%), Postives = 72/134 (53.73%), Query Frame = 0
Query: 6 SLIHYSAPEVAAKAIEALNGQELDNRKLHVREDR-----------SYLDSAEGVVVFVGNLPWSVTSEALQELFKEYNPLD-----VHVKTNMAGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDR 123
+L+ ++ PE A AIE ++ E+ R + VR +R + +++ G+ + V NLPW+ TSE L+++F++ + H T GRS+G+ V F E A AI NG +LE RP+Q++ DR
Sbjct: 156 ALVDFATPEEAQNAIEQMHNSEIQGRSIIVRVERPGAGQKSARVETRPENSSGLQIVVRNLPWTTTSEDLRQVFQQVGNVVNAVAVCHTDT---GRSKGWGTVLFETREQAQAAIQGFNGVELEHRPMQIKLDR 286
BLAST of EWM21128.1 vs. NCBI_GenBank
Match: gi|612397995|ref|XP_007514517.1| (predicted protein [Bathycoccus prasinos] >gi|412986331|emb|CCO14757.1| predicted protein [Bathycoccus prasinos]) HSP 1 Score: 104.375 bits (259), Expect = 2.506e-23 Identity = 67/180 (37.22%), Postives = 96/180 (53.33%), Query Frame = 0
Query: 50 VFVGNLPWSVTSEALQELFKEYNPLDVHVKTNMAGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDRQQAEAGEGEGVGNGG-PVGGLTD--------RVTLTNLAWTTEEGELVSLLSKAG-TVVGVEIQRHADTGRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMK 219
++VGN+PWS T E LQ LF + ++ + T RSRG+ALV F+D A A+ +NG+ L R I VR D +A + G+GG PV T+ R + NLAW T+E L+ G V+ E+ R + GRSKGWA+ FAS++ A + L+ T R R I ++
Sbjct: 11 LYVGNIPWSTTVEELQGLFTDAE--NIEIPTGRQNRSRGYALVSFSDESAAQSAMQAMNGHALGDRNISVRADNPLPKAPKSSSRGSGGAPVQRPTNLPEAEEGCRCYVGNLAWETDEQALIEHCQTIGHPVLRCEVARQSG-GRSKGWALIDFASKEAADAGVKALHDTECRARSIIVR 187 HSP 2 Score: 97.4413 bits (241), Expect = 9.900e-21 Identity = 67/239 (28.03%), Postives = 105/239 (43.93%), Query Frame = 0
Query: 6 SLIHYSAPEVAAKAIEALNGQELDNRKLHVREDR----------------------SYLDSAEGVVVFVGNLPWSVTSEALQELFKE--YNPLDVHVKTNMAGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDRQQAEAGEGEGVGNGGPVGGLTDRVTLTNLAWTTEEGELVSLLSKAGTVVGVEIQRHADTGRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMKF 220
+L+ +S A A++A+NG L +R + VR D + ++ EG +VGNL W +AL E + + L V GRS+G+AL+ F E A + L+ + R I VR +R A + P ++ + NL W+T +L + + GTVV + H DTGRSKGW F ++++A AI N + RP+ +K
Sbjct: 49 ALVSFSDESAAQSAMQAMNGHALGDRNISVRADNPLPKAPKSSSRGSGGAPVQRPTNLPEAEEGCRCYVGNLAWETDEQALIEHCQTIGHPVLRCEVARQSGGRSKGWALIDFASKEAADAGVKALHDTECRARSIIVRAERPGGAAAT-KPPREIRPENSSGLQIVVRNLPWSTTSDDLRQVFQQVGTVVDAKSTCHDDTGRSKGWGTVLFETQEQAQAAIAGFNGVELEGRPMQIKI 286 HSP 3 Score: 75.0998 bits (183), Expect = 1.739e-12 Identity = 44/133 (33.08%), Postives = 72/133 (54.14%), Query Frame = 0
Query: 6 SLIHYSAPEVAAKAIEALNGQELDNRKLHVREDRS------------YLDSAEGVVVFVGNLPWSVTSEALQELFKEYNPLDVHVKTNM---AGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDR 123
+LI +++ E A ++AL+ E R + VR +R +++ G+ + V NLPWS TS+ L+++F++ + V K+ GRS+G+ V F E A AI NG +LEGRP+Q++ DR
Sbjct: 157 ALIDFASKEAADAGVKALHDTECRARSIIVRAERPGGAAATKPPREIRPENSSGLQIVVRNLPWSTTSDDLRQVFQQVGTV-VDAKSTCHDDTGRSKGWGTVLFETQEQAQAAIAGFNGVELEGRPMQIKIDR 288
BLAST of EWM21128.1 vs. NCBI_GenBank
Match: gi|936528378|emb|CDO54123.1| (similar to Saccharomyces cerevisiae YNL004W HRB1 Poly(A+) RNA-binding protein [Geotrichum candidum]) HSP 1 Score: 106.301 bits (264), Expect = 4.194e-23 Identity = 74/248 (29.84%), Postives = 117/248 (47.18%), Query Frame = 0
Query: 7 LIHYSAPEVAAKAIEALNGQELDNRKLHVREDRSYLDSA-------------------EGVVVFVGNLPWSVTSEALQELFKEYNPL-DVHVKTNMAGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDR---------QQAEAGEGEGVGNGGPVGG-LTDRVTLTNLAWTTEEGELVSLLSKAGTVVGVEIQRHADTGRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMKFYSTT 224
++ YS E A KAI+ L + D R++ VREDR +S+ +G +F+ NLP+S + L++LF+E + V TN GRS+G V F++ A +AI NG++++GR ++VR DR A E +G G +++ + + NL W T + +LV L GTV +IQ +GRS G + F + A AI + RP+ + F S +
Sbjct: 149 IVEYSTREEAQKAIDKLTNLDFDGREIFVREDRETDNSSRGRHPPPPSSSRDRPPPPSDGSQLFIANLPYSAGWQDLKDLFREAGDIVRADVYTNNTGRSKGVGTVLFSNPNDAEIAIEKFNGFEMDGRALEVRVDRLVRGGPAPDASRPAPEPNAFTDGARGNGPMSETIFVDNLPWATTDNDLVELFQTVGTVERAQIQLEP-SGRSAGSGVVKFDTPASADIAIEKFHNYNYGNRPLKLSFVSYS 395
BLAST of EWM21128.1 vs. NCBI_GenBank
Match: gi|1069841021|ref|XP_018213089.1| (hypothetical protein OGAPODRAFT_15196 [Ogataea polymorpha] >gi|1037332866|gb|OBA18412.1| hypothetical protein OGAPODRAFT_15196 [Ogataea polymorpha]) HSP 1 Score: 100.138 bits (248), Expect = 1.179e-21 Identity = 71/241 (29.46%), Postives = 111/241 (46.06%), Query Frame = 0
Query: 8 IHYSAPEVAAKAIEALNGQELDNRKLHVREDRSYLDS----------------AEGVVVFVGNLPWSVTSEALQELFKEYNPL-DVHVKTNMAGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDRQQAEAGEGEG-----------VGNGGPVGGLTDRVTLTNLAWTTEEGELVSLLSKAGTVVGVEIQRHADTGRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMKF 220
+ ++ ++ +AI + + R++ VRED + EG VF+GNLP+SV + L++LFK P+ V+ + GRS+GF V F ++E A AI + NGY ++GR I+VR +Q + +G VG G P D + NL W T E +L L +V E+Q D R G A+ F D A+ A+N L+ +R + + F
Sbjct: 4 VEFANKDLVQEAISKFDRTMYEGREIFVREDLPPPEKENTGREERRRNAPPPLTEGYEVFIGNLPFSVRWQDLKDLFKSCGPIIRADVREDHRGRSKGFGTVIFENSEDADRAIADFNGYDMDGRRIEVRLGKQFNKEPQGAAESRNSEFVAGVVGQGEP----NDTIFADNLPWETSETDLYDLFGSIASVKRAELQ-FDDLNRPAGTAVVQFQELDGAIAAVNQLDNYEYGRRRLRVSF 239 The following BLAST results are available for this feature:
BLAST of EWM21128.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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