EWM21152.1, cds9521 (CDS) Nannochloropsis gaditana

Overview
NameEWM21152.1
Unique Namecds9521
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:157825..157853 -
Alignment locationKK037254.1:157563..157779 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21152.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_103873g1.4580.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:157825..157853 -
KK037254.1supercontigKK037254.1:157563..157779 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21152.1 vs. NCBI_GenBank
Match: gi|585101221|gb|EWM21152.1| (hypothetical protein Naga_103873g1 [Nannochloropsis gaditana])

HSP 1 Score: 144.821 bits (364), Expect = 8.764e-44
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0 
Query:    1 MWTRFWSISPNPSTWSALSPTRTSPASKTAFWSVWVSTAPSGWAYRACATNSLPPSPRTPPPPPPPPPPPPPSVGRAAHPP 81
            MWTRFWSISPNPSTWSALSPTRTSPASKTAFWSVWVSTAPSGWAYRACATNSLPPSPRTPPPPPPPPPPPPPSVGRAAHPP
Sbjct:    1 MWTRFWSISPNPSTWSALSPTRTSPASKTAFWSVWVSTAPSGWAYRACATNSLPPSPRTPPPPPPPPPPPPPSVGRAAHPP 81
The following BLAST results are available for this feature:
BLAST of EWM21152.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101221|gb|EWM21152.1|8.764e-44100.00hypothetical protein Naga_103873g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9552rna9552Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications