EWM30578.1, cds95 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30578.1 vs. NCBI_GenBank
Match: gi|553179417|ref|XP_005852699.1| (60s ribosome subunit biogenesis protein nip7-like protein [Nannochloropsis gaditana CCMP526] >gi|422295833|gb|EKU23132.1| 60s ribosome subunit biogenesis protein nip7-like protein [Nannochloropsis gaditana CCMP526] >gi|585113245|gb|EWM30578.1| 60s ribosome subunit biogenesis protein nip7 [Nannochloropsis gaditana]) HSP 1 Score: 375.941 bits (964), Expect = 4.691e-132 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0 Query: 1 MRPLSEDETRKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERMMKIATNFGREHLLSIGTCVGRFTKSEKFHIYITFLDYLAQYASYKVWVKPQSEMGFLYGNNIIKSGLGRMTEGIPQYAGVVVYSMTDIPLGFGVAAQPTDVCKDLDPGANVVLHQGDVGEYLRVEDELS 180 MRPLSEDETRKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERMMKIATNFGREHLLSIGTCVGRFTKSEKFHIYITFLDYLAQYASYKVWVKPQSEMGFLYGNNIIKSGLGRMTEGIPQYAGVVVYSMTDIPLGFGVAAQPTDVCKDLDPGANVVLHQGDVGEYLRVEDELS Sbjct: 1 MRPLSEDETRKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERMMKIATNFGREHLLSIGTCVGRFTKSEKFHIYITFLDYLAQYASYKVWVKPQSEMGFLYGNNIIKSGLGRMTEGIPQYAGVVVYSMTDIPLGFGVAAQPTDVCKDLDPGANVVLHQGDVGEYLRVEDELS 180
BLAST of EWM30578.1 vs. NCBI_GenBank
Match: gi|1214688274|gb|OWZ04263.1| (60S ribosome subunit biogenesis protein NIP7 [Phytophthora megakarya]) HSP 1 Score: 276.559 bits (706), Expect = 1.168e-92 Identity = 123/179 (68.72%), Postives = 151/179 (84.36%), Query Frame = 0 Query: 1 MRPLSEDETRKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERMMKIATNFGREHLLSIGTCVGRFTKSEKFHIYITFLDYLAQYASYKVWVKPQSEMGFLYGNNIIKSGLGRMTEGIPQYAGVVVYSMTDIPLGFGVAAQPTDVCKDLDPGANVVLHQGDVGEYLRVEDEL 179 MRPL++DE VFE+++KY+G N++ LV RPDE+YCFR VYY SE++M+ +TN G + L+SIGT VG+ TKS+KFH+ ITFLDYLAQYA YKVW+KP SEM FLYGNN++KSGLGR+TEG PQYAGVVVYSM DIPLGFG+AAQ T++CKDL+P A VVLHQ D+GEYLRVEDE+ Sbjct: 1 MRPLTDDEMTTVFEKISKYIGRNVQHLVTRPDEKYCFRLHGNIVYYCSEKLMRQSTNVGTDELMSIGTAVGKLTKSKKFHLRITFLDYLAQYAKYKVWIKPNSEMSFLYGNNVVKSGLGRITEGTPQYAGVVVYSMNDIPLGFGIAAQATEMCKDLEPTAYVVLHQADIGEYLRVEDEM 179
BLAST of EWM30578.1 vs. NCBI_GenBank
Match: gi|1173960582|gb|OQS06696.1| (60S ribosome subunit biogenesis protein NIP7 [Thraustotheca clavata]) HSP 1 Score: 276.559 bits (706), Expect = 1.194e-92 Identity = 122/179 (68.16%), Postives = 152/179 (84.92%), Query Frame = 0 Query: 1 MRPLSEDETRKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERMMKIATNFGREHLLSIGTCVGRFTKSEKFHIYITFLDYLAQYASYKVWVKPQSEMGFLYGNNIIKSGLGRMTEGIPQYAGVVVYSMTDIPLGFGVAAQPTDVCKDLDPGANVVLHQGDVGEYLRVEDEL 179 MRPL++DE + VFE+++KY+G N++ LV RPDE++CFR VYYVSE++M+ ATN G + LLS+GT VG+ TK++KFH+ ITFLDYLAQYA YKVW+KP SEM FLYGNN++KSGLGR+TEG PQYAGVVVYSM D+PLGFG+AAQ T++CKDLDP VVLHQ D+GEYLRVEDE+ Sbjct: 1 MRPLTDDEMKTVFEKISKYIGRNVQHLVVRPDEKFCFRLHGDIVYYVSEKLMRQATNIGTDQLLSLGTAVGKLTKTKKFHLRITFLDYLAQYAKYKVWIKPNSEMSFLYGNNVVKSGLGRITEGTPQYAGVVVYSMNDVPLGFGIAAQATEMCKDLDPTGYVVLHQADIGEYLRVEDEM 179
BLAST of EWM30578.1 vs. NCBI_GenBank
Match: gi|695434854|ref|XP_009531520.1| (hypothetical protein PHYSODRAFT_352017 [Phytophthora sojae] >gi|348674272|gb|EGZ14091.1| hypothetical protein PHYSODRAFT_352017 [Phytophthora sojae]) HSP 1 Score: 276.559 bits (706), Expect = 1.194e-92 Identity = 123/179 (68.72%), Postives = 151/179 (84.36%), Query Frame = 0 Query: 1 MRPLSEDETRKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERMMKIATNFGREHLLSIGTCVGRFTKSEKFHIYITFLDYLAQYASYKVWVKPQSEMGFLYGNNIIKSGLGRMTEGIPQYAGVVVYSMTDIPLGFGVAAQPTDVCKDLDPGANVVLHQGDVGEYLRVEDEL 179 MRPL++DE VFE+++KY+G N++ LV RPDE+YCFR VYY SE++M+ +TN G + LLSIGT VG+ TK++KFH+ ITFLDYLAQYA YKVW+KP SEM FLYGNN++KSGLGR+TEG PQYAGVVVYSM DIPLGFG+AAQ T++CKDL+P A VVLHQ D+GEYLRVEDE+ Sbjct: 1 MRPLTDDEMTTVFEKISKYIGRNVQHLVTRPDEKYCFRLHGNIVYYCSEKLMRQSTNVGSDELLSIGTAVGKLTKTKKFHLRITFLDYLAQYAKYKVWIKPNSEMSFLYGNNVVKSGLGRITEGTPQYAGVVVYSMNDIPLGFGIAAQATEMCKDLEPTAYVVLHQADIGEYLRVEDEM 179
BLAST of EWM30578.1 vs. NCBI_GenBank
Match: gi|1173942305|gb|OQR91329.1| (60S ribosome subunit biogenesis protein NIP7 [Achlya hypogyna]) HSP 1 Score: 276.174 bits (705), Expect = 1.392e-92 Identity = 122/179 (68.16%), Postives = 152/179 (84.92%), Query Frame = 0 Query: 1 MRPLSEDETRKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERMMKIATNFGREHLLSIGTCVGRFTKSEKFHIYITFLDYLAQYASYKVWVKPQSEMGFLYGNNIIKSGLGRMTEGIPQYAGVVVYSMTDIPLGFGVAAQPTDVCKDLDPGANVVLHQGDVGEYLRVEDEL 179 MRPL+++E + VFE+++KY+G N++ LV RPDE++CFR VYYVSE++M+ ATN G E LLS+GT VG+ TK++KFH+ ITFLDYLAQYA YKVW+KP SEM FLYGNN++KSGLGR+TEG PQYAGVVVYSM D+PLGFG+AAQ T++CKDLDP VVLHQ D+GEYLRVEDE+ Sbjct: 1 MRPLTDEEMKTVFEKISKYIGRNVQHLVVRPDEKFCFRLHGDIVYYVSEKLMRQATNIGTEQLLSLGTAVGKLTKTKKFHLRITFLDYLAQYAKYKVWIKPNSEMSFLYGNNVVKSGLGRITEGTPQYAGVVVYSMNDVPLGFGIAAQATEMCKDLDPTGYVVLHQADIGEYLRVEDEM 179
BLAST of EWM30578.1 vs. NCBI_GenBank
Match: gi|970648850|gb|KUF88274.1| (hypothetical protein AM588_10002002 [Phytophthora nicotianae] >gi|970664817|gb|KUG01637.1| 60S ribosome subunit biogenesis protein NIP7 [Phytophthora nicotianae]) HSP 1 Score: 276.174 bits (705), Expect = 1.392e-92 Identity = 123/179 (68.72%), Postives = 151/179 (84.36%), Query Frame = 0 Query: 1 MRPLSEDETRKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERMMKIATNFGREHLLSIGTCVGRFTKSEKFHIYITFLDYLAQYASYKVWVKPQSEMGFLYGNNIIKSGLGRMTEGIPQYAGVVVYSMTDIPLGFGVAAQPTDVCKDLDPGANVVLHQGDVGEYLRVEDEL 179 MRPL++DE VFE+++KY+G N++ LV RPDE+YCFR VYY SE++M+ +TN G + LLSIGT VG+ TK++KFH+ ITFLDYLAQYA YKVW+KP SEM FLYGNN++KSGLGR+TEG PQYAGVVVYSM DIPLGFG+AAQ T++CKDL+P A VVLHQ D+GEYLRVEDE+ Sbjct: 1 MRPLTDDEMTTVFEKISKYIGRNVQHLVTRPDEKYCFRLHGNIVYYCSEKLMRQSTNVGTDELLSIGTAVGKLTKTKKFHLRITFLDYLAQYAKYKVWIKPNSEMSFLYGNNVVKSGLGRITEGTPQYAGVVVYSMNDIPLGFGIAAQATEMCKDLEPTAYVVLHQADIGEYLRVEDEM 179
BLAST of EWM30578.1 vs. NCBI_GenBank
Match: gi|675169597|ref|XP_008893683.1| (hypothetical protein PPTG_02043 [Phytophthora parasitica INRA-310] >gi|566021750|gb|ETI44661.1| hypothetical protein F443_10651 [Phytophthora parasitica P1569] >gi|567959066|gb|ETK84646.1| hypothetical protein L915_10411 [Phytophthora parasitica] >gi|567987787|gb|ETL38082.1| hypothetical protein L916_10305 [Phytophthora parasitica] >gi|568017007|gb|ETL91184.1| hypothetical protein L917_10243 [Phytophthora parasitica] >gi|568047430|gb|ETM44511.1| hypothetical protein L914_10273 [Phytophthora parasitica] >gi|568107349|gb|ETN21979.1| hypothetical protein PPTG_02043 [Phytophthora parasitica INRA-310] >gi|570325362|gb|ETO73310.1| hypothetical protein F444_10751 [Phytophthora parasitica P1976] >gi|570949213|gb|ETP14470.1| hypothetical protein F441_10591 [Phytophthora parasitica CJ01A1] >gi|570982423|gb|ETP42551.1| hypothetical protein F442_10551 [Phytophthora parasitica P10297]) HSP 1 Score: 276.559 bits (706), Expect = 2.384e-92 Identity = 123/179 (68.72%), Postives = 151/179 (84.36%), Query Frame = 0 Query: 1 MRPLSEDETRKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERMMKIATNFGREHLLSIGTCVGRFTKSEKFHIYITFLDYLAQYASYKVWVKPQSEMGFLYGNNIIKSGLGRMTEGIPQYAGVVVYSMTDIPLGFGVAAQPTDVCKDLDPGANVVLHQGDVGEYLRVEDEL 179 MRPL++DE VFE+++KY+G N++ LV RPDE+YCFR VYY SE++M+ +TN G + LLSIGT VG+ TK++KFH+ ITFLDYLAQYA YKVW+KP SEM FLYGNN++KSGLGR+TEG PQYAGVVVYSM DIPLGFG+AAQ T++CKDL+P A VVLHQ D+GEYLRVEDE+ Sbjct: 28 MRPLTDDEMTTVFEKISKYIGRNVQHLVTRPDEKYCFRLHGNIVYYCSEKLMRQSTNVGTDELLSIGTAVGKLTKTKKFHLRITFLDYLAQYAKYKVWIKPNSEMSFLYGNNVVKSGLGRITEGTPQYAGVVVYSMNDIPLGFGIAAQATEMCKDLEPTAYVVLHQADIGEYLRVEDEM 206
BLAST of EWM30578.1 vs. NCBI_GenBank
Match: gi|669145786|ref|XP_008608455.1| (60S ribosome subunit biogenesis protein NIP7 [Saprolegnia diclina VS20] >gi|813187768|ref|XP_012207463.1| 60S ribosome subunit biogenesis protein NIP7 [Saprolegnia parasitica CBS 223.65] >gi|530739886|gb|EQC38128.1| 60S ribosome subunit biogenesis protein NIP7 [Saprolegnia diclina VS20] >gi|641527501|gb|KDO21784.1| 60S ribosome subunit biogenesis protein NIP7 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 274.633 bits (701), Expect = 5.787e-92 Identity = 121/179 (67.60%), Postives = 152/179 (84.92%), Query Frame = 0 Query: 1 MRPLSEDETRKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERMMKIATNFGREHLLSIGTCVGRFTKSEKFHIYITFLDYLAQYASYKVWVKPQSEMGFLYGNNIIKSGLGRMTEGIPQYAGVVVYSMTDIPLGFGVAAQPTDVCKDLDPGANVVLHQGDVGEYLRVEDEL 179 MRPL+++E + VFE+++KY+G N++ LV RPDE++CFR VYYVSE++M+ ATN G + LLS+GT VG+ TK++KFH+ ITFLDYLAQYA YKVW+KP SEM FLYGNN++KSGLGR+TEG PQYAGVVVYSM D+PLGFG+AAQ T++CKDLDP VVLHQ D+GEYLRVEDE+ Sbjct: 1 MRPLTDEEMKTVFEKISKYIGRNVQHLVVRPDEKFCFRLHGDIVYYVSEKLMRQATNIGTDQLLSLGTAVGKLTKTKKFHLRITFLDYLAQYAKYKVWIKPNSEMSFLYGNNVVKSGLGRITEGTPQYAGVVVYSMNDVPLGFGIAAQATEMCKDLDPTGYVVLHQADIGEYLRVEDEM 179
BLAST of EWM30578.1 vs. NCBI_GenBank
Match: gi|325190344|emb|CCA24818.1| (60S ribosome subunit biogenesis protein NIP7 putati [Albugo laibachii Nc14] >gi|325191835|emb|CCA26308.1| 60S ribosome subunit biogenesis protein NIP7 putati [Albugo laibachii Nc14]) HSP 1 Score: 273.863 bits (699), Expect = 1.288e-91 Identity = 120/179 (67.04%), Postives = 151/179 (84.36%), Query Frame = 0 Query: 1 MRPLSEDETRKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERMMKIATNFGREHLLSIGTCVGRFTKSEKFHIYITFLDYLAQYASYKVWVKPQSEMGFLYGNNIIKSGLGRMTEGIPQYAGVVVYSMTDIPLGFGVAAQPTDVCKDLDPGANVVLHQGDVGEYLRVEDEL 179 MRPL+++E + VFE+++KY+G N++ LV RPDERYCFR + VYY SER+M+ ATN E LLS+GTCVG+FTK +KF++ ITFLD++AQYA YKVWVKP SEM FLYGNN++KSGLGR+TEG PQYAGV+VYSM D+ LGFG+AAQ T++CKDL+P A VVLHQ D+GEYLR EDE+ Sbjct: 1 MRPLTDEELKTVFEKISKYIGANVQLLVTRPDERYCFRLHNDFVYYCSERLMRQATNISSEQLLSLGTCVGKFTKGKKFYLRITFLDHMAQYAKYKVWVKPNSEMSFLYGNNVVKSGLGRITEGTPQYAGVIVYSMNDLALGFGIAAQATEMCKDLEPTAYVVLHQADIGEYLRTEDEM 179
BLAST of EWM30578.1 vs. NCBI_GenBank
Match: gi|299469788|emb|CBN76642.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 273.863 bits (699), Expect = 1.391e-91 Identity = 123/179 (68.72%), Postives = 151/179 (84.36%), Query Frame = 0 Query: 1 MRPLSEDETRKVFERLAKYVGGNLEQLVNRPDERYCFRYMDQRVYYVSERMMKIATNFGREHLLSIGTCVGRFTKSEKFHIYITFLDYLAQYASYKVWVKPQSEMGFLYGNNIIKSGLGRMTEGIPQYAGVVVYSMTDIPLGFGVAAQPTDVCKDLDPGANVVLHQGDVGEYLRVEDEL 179 MRPL++DET+ +FE+LA Y+G N+EQL+NRPDE+ CFR RVYYVSER+M+ AT+ R+ LLS+GTC G+FTKS KF ++IT LDY++QYA YKVWVKP +EM FLYGN++ KSGLGR+TE P+Y G VVYSM+D+PLGFGVAAQPT+ CKDLDP A VVLHQ DVGEYLRVED+L Sbjct: 1 MRPLTDDETKVLFEKLANYIGKNIEQLINRPDEKCCFRLHKDRVYYVSERLMRQATSVSRDTLLSLGTCFGKFTKSGKFRLHITALDYISQYAKYKVWVKPSAEMSFLYGNHVQKSGLGRITENTPKYGGAVVYSMSDVPLGFGVAAQPTEFCKDLDPTAVVVLHQADVGEYLRVEDDL 179 The following BLAST results are available for this feature:
BLAST of EWM30578.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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