EWM21172.1, cds9497 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21172.1 vs. NCBI_GenBank
Match: gi|585101245|gb|EWM21172.1| (hypothetical protein Naga_100111g9 [Nannochloropsis gaditana]) HSP 1 Score: 352.058 bits (902), Expect = 1.056e-122 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0 Query: 1 MAVRPALTSYHTPSNRGFKFIGKAQMGVVWPLLGSAGPTEFLVRSGVLQILFTTILGWAMLLPHQAWGPSSSLATRLRSRDVAMAHVDWIMLALVQFAAAYILTLKAVPSAHVVARCLAFYGWVGPSVYMARAWGINGFRLDGKRMWDTVMGTLGFTGILAFTYGWAQIVRVWWM 175 MAVRPALTSYHTPSNRGFKFIGKAQMGVVWPLLGSAGPTEFLVRSGVLQILFTTILGWAMLLPHQAWGPSSSLATRLRSRDVAMAHVDWIMLALVQFAAAYILTLKAVPSAHVVARCLAFYGWVGPSVYMARAWGINGFRLDGKRMWDTVMGTLGFTGILAFTYGWAQIVRVWWM Sbjct: 1 MAVRPALTSYHTPSNRGFKFIGKAQMGVVWPLLGSAGPTEFLVRSGVLQILFTTILGWAMLLPHQAWGPSSSLATRLRSRDVAMAHVDWIMLALVQFAAAYILTLKAVPSAHVVARCLAFYGWVGPSVYMARAWGINGFRLDGKRMWDTVMGTLGFTGILAFTYGWAQIVRVWWM 175
BLAST of EWM21172.1 vs. NCBI_GenBank
Match: gi|913453589|ref|WP_050432998.1| (hypothetical protein [Chondromyces crocatus] >gi|908358610|gb|AKT41185.1| uncharacterized protein CMC5_053460 [Chondromyces crocatus]) HSP 1 Score: 79.337 bits (194), Expect = 1.179e-15 Identity = 47/132 (35.61%), Postives = 69/132 (52.27%), Query Frame = 0 Query: 36 AGPTEFLVRSGVLQILFTTILGWAMLLPHQAWGPSSSLATRLRSRDVAMAHVDWIMLALVQFAAAYILTLKAVPSAHVVARCLAFYGWVGPSVYMARAWGINGFRLDGKRMWDTVMGTLGFTGILAFTYGWA 167 + P L +G LQ+L +++LG ML+P Q WG LA R+ + + AH+DW+MLA +Q+ AA+ + + + VA L F GW P+ Y+ R GIN F L G+ G + LA WA Sbjct: 7 SDPVRLLAANGALQVLVSSLLGVYMLIPMQPWG--KRLAPRVNMKSLLAAHLDWLMLAFMQWGAAFAMNTWSSTRSLAVALLLVFGGWTNPTPYLLRGAGINAFVLAGRPAQIVAASVAGLSS-LAIIIAWA 135
BLAST of EWM21172.1 vs. NCBI_GenBank
Match: gi|1082762959|gb|OGA81084.1| (hypothetical protein A2711_08105 [Burkholderiales bacterium RIFCSPHIGHO2_01_FULL_63_240]) HSP 1 Score: 69.707 bits (169), Expect = 4.978e-12 Identity = 43/133 (32.33%), Postives = 67/133 (50.38%), Query Frame = 0 Query: 38 PTEFLVRSGVLQILFTTILGWAMLLPHQAWGPSSSLATRLRSRDVAMAHVDWIMLALVQFAAAYILTLKAVPSAHVVARCLAFYGWVGPSVYMARAWGINGFRLDGKRMWDTVMGTLGFTGILAFTYGWAQIV 170 P L + LQ+L +++LG ML+P Q WG LA R+ + + H+DW MLA +Q+ AA+++ V+A L F GW Y+ R +G+N F + G + G G + +LA W I+ Sbjct: 5 PVFALSCNAALQVLVSSLLGTFMLIPLQPWG--KKLAARVNMKSLLATHMDWYMLAFMQWGAAFMMDRWDAARDPVLALLLMFGGWTNALPYLLRGFGVNAFVMGGNTLQRVSAGIAGLS-VLAILVAWTAII 134
BLAST of EWM21172.1 vs. NCBI_GenBank
Match: gi|1127356082|gb|APR77485.1| (Hypothetical protein A7982_02832 [Minicystis rosea]) HSP 1 Score: 69.3218 bits (168), Expect = 7.365e-12 Identity = 49/130 (37.69%), Postives = 63/130 (48.46%), Query Frame = 0 Query: 41 FLVRSGVLQILFTTILGWAMLLPHQAWGPSSSLATRLRSRDVAMAHVDWIMLALVQFAAAYILTLKAVPSAHVVARCLAFYGWVGPSVYMARAWGINGFRLDGKRMWDTVMGTLGFTGILAFTYGWAQIV 170 LV + V Q+LF+ + GWAML+P Q WG L + AH+DWIML L Q AY L +V L F GWV P Y+ RA G + F L G + L T LA T G++ I+ Sbjct: 4 LLVTNAVAQVLFSCLFGWAMLVPMQPWG--QRWRNILPVKAALAAHLDWIMLGLAQGLVAYASGLVEPRHPTLVTALLVFGGWVNPVPYLLRAKGTDAFVLAGG-LRQRAAALLAGTSSLALTIGFSLIL 130
BLAST of EWM21172.1 vs. NCBI_GenBank
Match: gi|947710574|ref|WP_056372926.1| (MULTISPECIES: hypothetical protein [Sphingopyxis] >gi|945920543|gb|KQZ73801.1| hypothetical protein ASD73_13460 [Sphingopyxis sp. Root154] >gi|946155970|gb|KRC07942.1| hypothetical protein ASE06_15805 [Sphingopyxis sp. Root214]) HSP 1 Score: 60.8474 bits (146), Expect = 1.027e-8 Identity = 42/123 (34.15%), Postives = 63/123 (51.22%), Query Frame = 0 Query: 40 EFLVRSGVLQILFTTILGWAMLLPHQAWGPSSSLATRLRSRDVAMAHVDWIMLALVQFAAAYILTLKAVPSAHVVARCLAFYGWVGPSVYMARAWGINGFRLDGKRMWDT--VMGTLGFTGIL 160 +FL SG + I F+ +G ML P + + A + + + AH+DWIML L+Q A ++ L A+ A V +AF W+ P Y+ RA+GIN F G + + +G L T IL Sbjct: 8 KFLALSGSISIFFSAWIGVIMLFPRRP-NRDAGEAGGVNFKQIGAAHIDWIMLGLMQGLAGLLILLFAITPAPYVLWLMAFGAWLNPLPYVFRAFGINAFVFAGGPVQRSAATLGGLSSTAIL 129
BLAST of EWM21172.1 vs. NCBI_GenBank
Match: gi|823656424|ref|WP_047092006.1| (hypothetical protein [Erythrobacter marinus] >gi|823479336|gb|KLI64148.1| hypothetical protein AAV99_00240 [Erythrobacter marinus]) HSP 1 Score: 59.6918 bits (143), Expect = 3.866e-8 Identity = 41/127 (32.28%), Postives = 63/127 (49.61%), Query Frame = 0 Query: 40 EFLVRSGVLQILFTTILGWAMLLPHQAWGPSSSLATRLRSRDVAMAHVDWIMLALVQFAAAYILTLKAVPSAHVVARCLAFYGWVGPSVYMARAWGINGFRLDGKRMWDTVMGTLGFTGILAFTYGW 166 ++L+ SG L I + ++LG M++PH S + R + AH+DWIMLA +Q AA +L L + + + + F GW+ Y RA+GIN F G+ + T LG + T W Sbjct: 12 QWLMFSGALAIFWASLLGLFMMIPHLQMSTLSKATRSVNFRLLLSAHLDWIMLAFMQGLAAGLLVLFDLSAPVWLVAGIIFGGWMNAVPYFLRAFGINAFVYGGETIQKTAF-ILGGISVFILTIAW 137 The following BLAST results are available for this feature:
BLAST of EWM21172.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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