EWM21174.1, cds9495 (CDS) Nannochloropsis gaditana

Overview
NameEWM21174.1
Unique Namecds9495
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:76523..77234 -
Alignment locationKK037254.1:76108..76304 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21174.1
Productplastid lipid associated protein
Orig transcript idgnl|cribi|Naga_100111g7.4973.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:76523..77234 -
KK037254.1supercontigKK037254.1:76108..76304 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR006843PAP/fibrillin_dom
Homology
BLAST of EWM21174.1 vs. NCBI_GenBank
Match: gi|585101247|gb|EWM21174.1| (plastid lipid associated protein [Nannochloropsis gaditana])

HSP 1 Score: 608.216 bits (1567), Expect = 0.000e+0
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0
Query:    1 MLLIKYRTHTGAMTLSRCLWMLSVLVLIAFSALSSAFYLSSRPAFNVADGKPPTPTSLPAALASWPLTLGASRKSPRVLLNTENSLLQAIQGLDRREVQNSVQAQGRVSGLIKELEAAKGIPKATTTREINGKWRLLYTSSDSTASPIQNTFVGNKAFAVYQEIDIAPSASSSAPGTVTNIVDFGGAIGALNVQALASTPSRPIPNFVPRLGDGRFFGLNILGISKTEVPRDSDPDDRIDFKFDNAGFDLGLLPFRIPYPVPFRLLNDEVKGWLEVTYLSGRLRVSRGNKGTIFVLEKVEES 302
            MLLIKYRTHTGAMTLSRCLWMLSVLVLIAFSALSSAFYLSSRPAFNVADGKPPTPTSLPAALASWPLTLGASRKSPRVLLNTENSLLQAIQGLDRREVQNSVQAQGRVSGLIKELEAAKGIPKATTTREINGKWRLLYTSSDSTASPIQNTFVGNKAFAVYQEIDIAPSASSSAPGTVTNIVDFGGAIGALNVQALASTPSRPIPNFVPRLGDGRFFGLNILGISKTEVPRDSDPDDRIDFKFDNAGFDLGLLPFRIPYPVPFRLLNDEVKGWLEVTYLSGRLRVSRGNKGTIFVLEKVEES
Sbjct:    1 MLLIKYRTHTGAMTLSRCLWMLSVLVLIAFSALSSAFYLSSRPAFNVADGKPPTPTSLPAALASWPLTLGASRKSPRVLLNTENSLLQAIQGLDRREVQNSVQAQGRVSGLIKELEAAKGIPKATTTREINGKWRLLYTSSDSTASPIQNTFVGNKAFAVYQEIDIAPSASSSAPGTVTNIVDFGGAIGALNVQALASTPSRPIPNFVPRLGDGRFFGLNILGISKTEVPRDSDPDDRIDFKFDNAGFDLGLLPFRIPYPVPFRLLNDEVKGWLEVTYLSGRLRVSRGNKGTIFVLEKVEES 302          
BLAST of EWM21174.1 vs. NCBI_GenBank
Match: gi|553192698|ref|XP_005855626.1| (aminopeptidase N [Nannochloropsis gaditana CCMP526] >gi|422293432|gb|EKU20732.1| aminopeptidase N [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 436.417 bits (1121), Expect = 1.618e-140
Identity = 228/298 (76.51%), Postives = 237/298 (79.53%), Query Frame = 0
Query:   30 FSALSSAFYLSSRPAFNVADGK----------------PPTPTSLPAALASWPLTLGASRKSPRVLLN---------TENSLLQAIQGLDRREVQNSVQAQGRVSGLIKELEAAKGIPKATTTREINGKWRLLYTSSDSTASPIQNTFVGNKAFAVYQEIDIAPSASSSAPGTVTNIVDFGGAIGALNVQALASTPSRPIPNFVPRLGDGRFFGLNILGISKTEVPRDSDPDDRIDFKFDNAGFDLGLLPFRIPYPVPFRLLNDEVKGWLEVTYLSGRLRVSRGNKGTIFVLEKVEES 302
            F AL  AF  S+   F+  DG+                P     L  A + W       R   +  L+         + ++   AIQGLDRREVQNSVQAQGRVSGLIKELEAAKGI KATTTREINGKWRLLYTSSDSTASPIQNTFVGNKAFAVYQEIDIAPSASSSAPGTVTNIVDFGGAIGALNVQALASTPSRPIPNFVPRLGDGRFFGLNILGISKTEVPRDSDPDDRIDFKFDNAGFDLGLLPFRIPYPVPFRLLNDEVKGWLEVTYLSGRLRVSRGNKGTIFVLEKVEES
Sbjct:  960 FRALIGAFANSNLARFHAEDGRGYVLVADMVLAVDKLNPQVAARLAGAFSLWRKFENTRRNMMKAQLDRLMAVGDGLSRDTFEIAIQGLDRREVQNSVQAQGRVSGLIKELEAAKGILKATTTREINGKWRLLYTSSDSTASPIQNTFVGNKAFAVYQEIDIAPSASSSAPGTVTNIVDFGGAIGALNVQALASTPSRPIPNFVPRLGDGRFFGLNILGISKTEVPRDSDPDDRIDFKFDNAGFDLGLLPFRIPYPVPFRLLNDEVKGWLEVTYLSGRLRVSRGNKGTIFVLEKVEES 1257          
BLAST of EWM21174.1 vs. NCBI_GenBank
Match: gi|298705387|emb|CBJ28677.1| (expressed unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 242.662 bits (618), Expect = 2.590e-75
Identity = 127/246 (51.63%), Postives = 165/246 (67.07%), Query Frame = 0
Query:   54 TPTSLPAA-LASWPLTLGASRKSPRVLLNTENSLLQAIQGLDRREVQNSVQAQGRVSGLIKELEAAKGIPKATTTREINGKWRLLYTSSDSTASPIQNTFVGNKAFAVYQEIDIAPSASSSAPGTVTNIVDFGGAIGALNVQALASTPSRPIPNFVPRLGDGRFFGLNILGISKTEVPRDSDPDDRIDFKFDNAGFDLGLLPFRIPYPVPFRLLNDEVKGWLEVTYLSGRLRVSRGNKGTIFVLEK 298
            +P SLP   +A +    G+S          E  LL AI+G+  R    + + +  V   ++ LE+  G P A ++  ++G WRL++T++  TASP+Q +FVG   FA+YQ+ID+     S  P TVTN+VDFG  +G L V ALASTPSRP+  FVPR GDGRFFGLNILG+S+T  P D  P  RIDF+FD AGFD   LPF IPYPVPFRL  DEVKGW++VTYLS RLR++RGNKGT+FVL++
Sbjct:   83 SPASLPEYFMALFGGNKGSSATRASKAEELEADLLSAIKGVQGRGRDVTQEQRELVDKAVEALESDGGAPNAASSPLVDGSWRLIFTTTPGTASPVQRSFVGVDGFAIYQDIDLF----SEVPPTVTNVVDFGPRVGQLRVTALASTPSRPMEGFVPRKGDGRFFGLNILGVSQTTPPED--PSRRIDFQFDEAGFDFEALPFNIPYPVPFRLFGDEVKGWIDVTYLSERLRIARGNKGTLFVLQR 322          
BLAST of EWM21174.1 vs. NCBI_GenBank
Match: gi|545371091|ref|XP_005650147.1| (hypothetical protein COCSUDRAFT_22800 [Coccomyxa subellipsoidea C-169] >gi|384252126|gb|EIE25603.1| hypothetical protein COCSUDRAFT_22800 [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 189.504 bits (480), Expect = 9.623e-54
Identity = 110/233 (47.21%), Postives = 145/233 (62.23%), Query Frame = 0
Query:   71 ASRKSPRVLLNTENSLLQAIQGLDRREVQNSVQAQGRVSGLIKELEAAKGIPKATTTREINGKWRLLYTSSDSTASPIQNTFVGNKAFAVYQEIDIAPSASSSAPGTVTNIVDFGGAIGALNVQALASTPSRPIPNFVPRLGDGRFFGLNILGISKTEVPRDSDPDDRIDFKFDNAGFDLGLLPFRIPYPVPFRLLNDEVK---GWLEVTYLS--GRLRVSRGNKGTIFVLEK 298
            A ++ P    N     L  +QG  +  + ++ Q +  +   + ELE + G+   TT+  + G+W+LLYTS   TASPIQ TFVG +AF+VYQE+ +  S        V NIV FG  IG L V+A A+T SRP+P F PR G     GL I G SKTE P  +  D RIDF+FD A FDL +LPF++PYPVPF+LL DE K   GW+++TYLS  G  R+SRGNKGT+F+L K
Sbjct:   57 ARKRGPEDARNIIIGCLSGVQGRGKSGL-DATQLEA-LDAAVDELETSGGVRAPTTSPLLEGRWKLLYTSRPGTASPIQQTFVGVQAFSVYQEVLVGDSGVR-----VNNIVSFGNNIGQLKVEAEANTDSRPLPGFTPRKGK----GLPIFGKSKTEPP--AKKDIRIDFQFDRAAFDLKVLPFKVPYPVPFKLLGDETKACIGWIDITYLSPDGDFRLSRGNKGTLFILIK 276          
BLAST of EWM21174.1 vs. NCBI_GenBank
Match: gi|926772962|ref|XP_013894955.1| (putative plastid-lipid-associated protein 12 [Monoraphidium neglectum] >gi|761963251|gb|KIY95935.1| putative plastid-lipid-associated protein 12 [Monoraphidium neglectum])

HSP 1 Score: 183.341 bits (464), Expect = 3.573e-51
Identity = 113/238 (47.48%), Postives = 144/238 (60.50%), Query Frame = 0
Query:   70 GASRKSPRVLLNTENSLLQAIQGLDRREVQN-SVQAQGRVSGLIKELEAAKGIPKATTTREINGKWRLLYTSSDSTASPIQNTFVGNKAFAVYQEIDIAPSASSSAPGTVTNIVDFGGAIGALNVQALASTPSRPIPNFVPRLGDGRFFGLNILGISKTEVPRDSDPDDRIDFKFDNAGFDLGLLPFRIPYPVPFRLLNDEVK------GWLEVTYLS--GRLRVSRGNKGTIFVLEK 298
            G +R        TE ++L A++    R  +  S +A  ++S  I  LE   G+   TT   I+GKWRLLYTS   +ASPIQ TF G +AF +YQE+D+    SS  P  V N+VDFG  IG L VQA AST SRP+  F PR+G+G  FG  ILG S    P  + P+ RIDF+FD A F    LPF IPYPVPFR+L DE K      GW++ TY++  G  R++RGNKGT+FVL K
Sbjct:   12 GTTRTKAGSRATTELAVLDALRSAKGRGKEGLSEEALQQLSLAISVLEQDGGVADPTTLDAIDGKWRLLYTSRPGSASPIQRTFTGVEAFKIYQEVDL----SSDLP-RVNNVVDFGEEIGYLIVQAKASTESRPLEGFTPRVGEGLPFG--ILGKSFNTPP--ARPNSRIDFQFDQAAFHFKFLPFSIPYPVPFRILGDERKARPPSPGWIDTTYMNQDGTFRLARGNKGTLFVLVK 240          
BLAST of EWM21174.1 vs. NCBI_GenBank
Match: gi|1004148558|gb|KXZ56530.1| (hypothetical protein GPECTOR_1g476 [Gonium pectorale])

HSP 1 Score: 171.4 bits (433), Expect = 1.977e-46
Identity = 92/195 (47.18%), Postives = 127/195 (65.13%), Query Frame = 0
Query:  107 RVSGLIKELEAAKGIPKATTTREINGKWRLLYTSSDSTASPIQNTFVGNKAFAVYQEIDIAPSASSSAPG-TVTNIVDFGGAIGALNVQALASTPSRPIPNFVPRLGDGRFFGLNILGISKTEVPRDSDPDDRIDFKFDNAGFDLGLLPFRIPYPVPFRLLNDEVKGWLEVTYLS--GRLRVSRGNKGTIFVLEK 298
            +++  ++ LEA  G+   TT   ++G+WRLLYTS   +ASPIQ TF G +AF ++QE+ +A           V N+V+F G +G L V+A AST +RP+P F PR G+    GL + G S T  P  +  + R+DF+FD A F+   LPF+IPYPVPFR+L DE KGWL+VTY++     R+SRGNKGT+FVL K
Sbjct:   80 QLTAAVEALEADGGVADPTTLPSLDGRWRLLYTSRPGSASPIQRTFTGVEAFGIFQEVALAGGGEGEGEEPRVNNVVEF-GPLGFLKVEAQASTDTRPLPGFTPRAGE----GLPLFGKSFTYPP--ARRNMRVDFQFDKAAFNFRFLPFKIPYPVPFRILGDERKGWLDVTYMNTDATFRLSRGNKGTLFVLVK 267          
BLAST of EWM21174.1 vs. NCBI_GenBank
Match: gi|764565579|ref|XP_011461839.1| (PREDICTED: probable plastid-lipid-associated protein 12, chloroplastic isoform X2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 165.622 bits (418), Expect = 4.335e-45
Identity = 96/221 (43.44%), Postives = 125/221 (56.56%), Query Frame = 0
Query:   83 ENSLLQAIQGLDRREVQNSVQAQGRVSGLIKELEAAKGIPKATTTREINGKWRLLYTSSDSTASPIQNTFVGNKAFAVYQEIDIAPSASSSAPGTVTNIVDFGGAIGALNVQALASTPSRPIPNFVPRLGDGRFFGLNILGISKTEVPRDSDPDDRIDFKFDNAGFDLGLLPFRIPYPVPFRLLNDEVKGWLEVTYL--SGRLRVSRGNKGTIFVLEKVEE 301
            ENSL++A+ G+  R    S Q    V   +K LEA KG+P+ T++  I G+W+L++T+   TASPIQ TFVG   F+V+QE+ +      +    V+NIV F  AIG L V+A AS            + DG+                      RI F+FD A F    LPF++PYPVPFRLL DE KGWL+ TYL  SG LR+SRGNKGT FVL+K  E
Sbjct:   55 ENSLVEALIGIQGRGRSASPQQLNEVESAVKVLEALKGVPEPTSSSLIEGRWQLMFTTRPGTASPIQRTFVGVDFFSVFQEVYL-----QTKDQRVSNIVKFSDAIGELKVEAEAS------------IKDGK----------------------RILFRFDKAAFSFKFLPFKVPYPVPFRLLGDEAKGWLDTTYLSESGNLRISRGNKGTTFVLQKKAE 236          
BLAST of EWM21174.1 vs. NCBI_GenBank
Match: gi|658006662|ref|XP_008338501.1| (PREDICTED: probable plastid-lipid-associated protein 12, chloroplastic [Malus domestica] >gi|658006664|ref|XP_008338502.1| PREDICTED: probable plastid-lipid-associated protein 12, chloroplastic [Malus domestica])

HSP 1 Score: 166.777 bits (421), Expect = 4.725e-45
Identity = 108/275 (39.27%), Postives = 146/275 (53.09%), Query Frame = 0
Query:   33 LSSAFYLSSRPAFNVADGKPPTPTSLPAALASWPLTLGASRKSPRVLLN-------TENSLLQAIQGLDRREVQNSVQAQGRVSGLIKELEAAKGIPKATTTREINGKWRLLYTSSDSTASPIQNTFVGNKAFAVYQEIDIAPSASSSAPGTVTNIVDFGGAIGALNVQALASTPSRPIPNFVPRLGDGRFFGLNILGISKTEVPRDSDPDDRIDFKFDNAGFDLGLLPFRIPYPVPFRLLNDEVKGWLEVTYL--SGRLRVSRGNKGTIFVLEK 298
            L S  Y   +P F+      P+PT+LP    S   + G ++   +VL          ENSL++A+ G+  R    S Q    V   +  LE  +G+P  T++  I G+W+L++T+   TASPIQ TFVG   F+V+QE+ +     +S P  V+NIV F  A+G L V+A AS            + DG+                      RI F+FD A F L  LPF++PYPVPFRLL DE KGWL+ TYL  SG LR+SRGNKGT FVL+K
Sbjct:   11 LRSFHYWRQKPTFS------PSPTTLPFYRNSSASSAGRTKSLTKVLTQEEVSFTEQENSLVEALIGIQGRGRSASPQQLTDVQNAVNVLEGLQGVPDPTSSSLIEGRWQLMFTTRPGTASPIQRTFVGVDFFSVFQEVYL----RTSDP-RVSNIVKFSDAVGELKVEAAAS------------IKDGK----------------------RILFRFDKAAFSLKFLPFKVPYPVPFRLLGDEAKGWLDTTYLSESGNLRISRGNKGTTFVLQK 240          
BLAST of EWM21174.1 vs. NCBI_GenBank
Match: gi|159490954|ref|XP_001703438.1| (plastid lipid associated protein [Chlamydomonas reinhardtii] >gi|158280362|gb|EDP06120.1| plastid lipid associated protein, partial [Chlamydomonas reinhardtii])

HSP 1 Score: 166.392 bits (420), Expect = 6.107e-45
Identity = 99/236 (41.95%), Postives = 139/236 (58.90%), Query Frame = 0
Query:   70 GASRKSPRVLLNTENSLLQAIQGLDRREVQNSVQAQ-GRVSGLIKELEAAKGIPKATTTREINGKWRLLYTSSDSTASPIQNTFVGNKAFAVYQEIDIAPSASSSAPGT----VTNIVDFGGAIGALNVQALASTPSRPIPNFVPRLGDGRFFGLNILGISKTEVPRDSDPDDRIDFKFDNAGFDLGLLPFRIPYPVPFRLLNDEVKGWLEVTYLS--GRLRVSRGNKGTIFVLEK 298
            GA + S R     E ++L A+     R  +   + Q  +++  ++ LEA  G+   TT   ++G+WRLLYTS   +ASPIQ TF G  +F+++QE+ +               V N+V+FG A+G L V+A AST  RP+P F PR G+G    L + G S       + P+ RIDF+FD A F+   LPF IPYPVPFR+L DE KGW++VTY++     R+SRGNKGT+FVL K
Sbjct:   39 GAKQLSVRERALAEQAVLSALASARGRGKEGLSEEQLEQLNSAVEALEADGGVADPTTLPALDGRWRLLYTSRPGSASPIQRTFTGVDSFSIFQEVLLTQEGGGEDGQEGGPRVNNVVEFG-ALGFLKVEAQASTDGRPLPGFTPRQGEG----LPLFGKSNNYPA--ARPNMRIDFQFDRAAFNFRFLPFTIPYPVPFRILGDERKGWIDVTYMNSDSTFRLSRGNKGTLFVLAK 267          
BLAST of EWM21174.1 vs. NCBI_GenBank
Match: gi|302830576|ref|XP_002946854.1| (hypothetical protein VOLCADRAFT_86875 [Volvox carteri f. nagariensis] >gi|300267898|gb|EFJ52080.1| hypothetical protein VOLCADRAFT_86875 [Volvox carteri f. nagariensis])

HSP 1 Score: 167.162 bits (422), Expect = 8.081e-45
Identity = 101/234 (43.16%), Postives = 141/234 (60.26%), Query Frame = 0
Query:   81 NTENSLLQAIQGLDRREVQN-SVQAQGRVSGLIKELEAAKGIPKATTTREINGKWRLLYTSSDSTASPIQNTFVGNKAFAVYQEIDI---APSASSSAPGT----------VTNIVDFGGAIGALNVQALASTPSRPIPNFVPRLGDGRFFGLNILGISKTEVPRDSDPDDRIDFKFDNAGFDLGLLPFRIPYPVPFRLLNDEVKGWLEVTYLS--GRLRVSRGNKGTIFVLEK 298
              E ++L A+ G   R  +  S      ++  ++ LEA  G+   TT   ++G+WRLLYTS   +ASPIQ TF G +AF+++QE+ +    P A++   G           V N+V+FG ++G L V+A AST +RP+  F PR G+G    L + G S T  P    P+ RIDF+FD A F    LPF++PYPVPF+LL DE KGWL+VTY++  G  R+SRGNKGT+FVL K
Sbjct:   53 QAEQAVLTALNGARGRGKEGLSPDQLDELNRAVEVLEADGGVADPTTQPSLDGRWRLLYTSRPGSASPIQRTFTGVEAFSIFQEVQLTLRGPEAAAEDGGEEQEEEEEGPRVNNVVEFG-SLGFLRVEAQASTDTRPLVGFTPRPGEG----LPLFGKSFTYPP--IRPNSRIDFQFDRAAFTFRFLPFKLPYPVPFKLLGDERKGWLDVTYMNTDGTFRLSRGNKGTLFVLVK 279          
The following BLAST results are available for this feature:
BLAST of EWM21174.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101247|gb|EWM21174.1|0.000e+0100.00plastid lipid associated protein [Nannochloropsis ... [more]
gi|553192698|ref|XP_005855626.1|1.618e-14076.51aminopeptidase N [Nannochloropsis gaditana CCMP526... [more]
gi|298705387|emb|CBJ28677.1|2.590e-7551.63expressed unknown protein [Ectocarpus siliculosus][more]
gi|545371091|ref|XP_005650147.1|9.623e-5447.21hypothetical protein COCSUDRAFT_22800 [Coccomyxa s... [more]
gi|926772962|ref|XP_013894955.1|3.573e-5147.48putative plastid-lipid-associated protein 12 [Mono... [more]
gi|1004148558|gb|KXZ56530.1|1.977e-4647.18hypothetical protein GPECTOR_1g476 [Gonium pectora... [more]
gi|764565579|ref|XP_011461839.1|4.335e-4543.44PREDICTED: probable plastid-lipid-associated prote... [more]
gi|658006662|ref|XP_008338501.1|4.725e-4539.27PREDICTED: probable plastid-lipid-associated prote... [more]
gi|159490954|ref|XP_001703438.1|6.107e-4541.95plastid lipid associated protein [Chlamydomonas re... [more]
gi|302830576|ref|XP_002946854.1|8.081e-4543.16hypothetical protein VOLCADRAFT_86875 [Volvox cart... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9526rna9526Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications