EWM21178.1, cds9494 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21178.1 vs. NCBI_GenBank
Match: gi|585101251|gb|EWM21178.1| (trna- methyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 1053.89 bits (2724), Expect = 0.000e+0 Identity = 522/522 (100.00%), Postives = 522/522 (100.00%), Query Frame = 0
Query: 1 MMKVSGILSQSLAFCVLCGQAAATAWSRRRHQLLQHHQHAFIFGLMGTFPRAGRYASNFLVEQRSRCFSATSSLSSSTLSAFPSSNSSYSSSSSSNPASSPHPFLSPPRPLSSSSSQHDSFIPSLLDKSLFESECHVQALRLPAAYCHHAIQSLSPFLFRSTTQRSVMLPGRCTLPLDPPLKPDERLLLFCPPMLDDDQEDGDARARGCAEPTRQHQTHTSHGSETSTGCQELVDNLLRTIPFASLLPPPGLPVRLTYEDLSLHQALRRLLPPSLDVPASFETVGHLAHLNLRAEVLPYKHLIAQVVLDKNRKRLQTVVNKVGEIGSTFRVLPLEVIGGKKDTCVRVKESGARFEFDYAQVYWNSRLQGEHARIIDLVVSEGREGGRAGAGVERVDDTGDSPPVVVWDVFAGVGPFALPLAVRGCQVYANDLNPDSYRYLCHNAALNKVPLSFPSVPPSSPSSLPAGLPDAKGSSARAAATPSSSALPAPPPILLPQAPSPRSVQSGREGLPTRPRPGEETR 522
MMKVSGILSQSLAFCVLCGQAAATAWSRRRHQLLQHHQHAFIFGLMGTFPRAGRYASNFLVEQRSRCFSATSSLSSSTLSAFPSSNSSYSSSSSSNPASSPHPFLSPPRPLSSSSSQHDSFIPSLLDKSLFESECHVQALRLPAAYCHHAIQSLSPFLFRSTTQRSVMLPGRCTLPLDPPLKPDERLLLFCPPMLDDDQEDGDARARGCAEPTRQHQTHTSHGSETSTGCQELVDNLLRTIPFASLLPPPGLPVRLTYEDLSLHQALRRLLPPSLDVPASFETVGHLAHLNLRAEVLPYKHLIAQVVLDKNRKRLQTVVNKVGEIGSTFRVLPLEVIGGKKDTCVRVKESGARFEFDYAQVYWNSRLQGEHARIIDLVVSEGREGGRAGAGVERVDDTGDSPPVVVWDVFAGVGPFALPLAVRGCQVYANDLNPDSYRYLCHNAALNKVPLSFPSVPPSSPSSLPAGLPDAKGSSARAAATPSSSALPAPPPILLPQAPSPRSVQSGREGLPTRPRPGEETR
Sbjct: 1 MMKVSGILSQSLAFCVLCGQAAATAWSRRRHQLLQHHQHAFIFGLMGTFPRAGRYASNFLVEQRSRCFSATSSLSSSTLSAFPSSNSSYSSSSSSNPASSPHPFLSPPRPLSSSSSQHDSFIPSLLDKSLFESECHVQALRLPAAYCHHAIQSLSPFLFRSTTQRSVMLPGRCTLPLDPPLKPDERLLLFCPPMLDDDQEDGDARARGCAEPTRQHQTHTSHGSETSTGCQELVDNLLRTIPFASLLPPPGLPVRLTYEDLSLHQALRRLLPPSLDVPASFETVGHLAHLNLRAEVLPYKHLIAQVVLDKNRKRLQTVVNKVGEIGSTFRVLPLEVIGGKKDTCVRVKESGARFEFDYAQVYWNSRLQGEHARIIDLVVSEGREGGRAGAGVERVDDTGDSPPVVVWDVFAGVGPFALPLAVRGCQVYANDLNPDSYRYLCHNAALNKVPLSFPSVPPSSPSSLPAGLPDAKGSSARAAATPSSSALPAPPPILLPQAPSPRSVQSGREGLPTRPRPGEETR 522
BLAST of EWM21178.1 vs. NCBI_GenBank
Match: gi|553192714|ref|XP_005855630.1| (hypothetical protein NGA_0599400 [Nannochloropsis gaditana CCMP526] >gi|422293436|gb|EKU20736.1| hypothetical protein NGA_0599400 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 415.616 bits (1067), Expect = 2.205e-141 Identity = 225/329 (68.39%), Postives = 226/329 (68.69%), Query Frame = 0
Query: 194 MLDDDQEDGDARARGCAEPTRQHQTHTSHGSETSTGCQELVDNLLRTIPFASLLPPPGLPVRLTYEDLSLHQALRRLLPPSLDVPASFETVGHLAHLNLRAEVLPYKHLIAQVVLDKNRKRLQTVVNKVGEIGSTFRVLPLEVIGGKKDTCVRVKESGARFEFDYAQVYWNSRLQGEHARIIDLVVSEGREGGRAGAGVERVDDTGDSPPVVVWDVFAGVGPFALPLAVRGCQVYANDLNPDSYRYLCHNAALNKVPLSFPSVPPSSPSSLPAGLPDAKGSSARAAATPSSSALPAPPPILLPQAPSPRSVQSGREGLPTRPRPGEETR 522
MLDDDQEDG ARARGCAEPTRQHQTHTSHGSETSTGCQELVDNLLRTIP ASLLPPPGLPVRLTYEDLSLHQALRRLLPPSLDVPASFETVGHLAHLNLRAEVLPYKHLIAQVVLDKNRKRLQTVVNKVGEIGSTFRVLPLEVIGGKKDTCVRVKESGA FEFDYAQVYWNSRLQGEHARIIDL VYANDLNP+SYRYLCHNAALNK P SPRSVQSGREGLPT PRPGEETR
Sbjct: 1 MLDDDQEDGFARARGCAEPTRQHQTHTSHGSETSTGCQELVDNLLRTIPSASLLPPPGLPVRLTYEDLSLHQALRRLLPPSLDVPASFETVGHLAHLNLRAEVLPYKHLIAQVVLDKNRKRLQTVVNKVGEIGSTFRVLPLEVIGGKKDTCVRVKESGAWFEFDYAQVYWNSRLQGEHARIIDL-------------------------------------------------VYANDLNPESYRYLCHNAALNKAP-------------------------------------------------SPRSVQSGREGLPTCPRPGEETR 231
BLAST of EWM21178.1 vs. NCBI_GenBank
Match: gi|585104825|gb|EWM23671.1| (trna (guanine-n -)-methyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 224.172 bits (570), Expect = 1.913e-63 Identity = 141/345 (40.87%), Postives = 184/345 (53.33%), Query Frame = 0
Query: 107 PPRPLSSSSSQH-DSFIPSLLDKSLFESECHVQALRLPAAYCHHAIQSLSPFLFRSTTQRSVMLPGRCTLPLDPPLKPDERLLLFCPPMLDDDQEDGDARARGCAEPTRQHQTHTSHGSETSTGCQELVDNLLRTIPFASLLPPPGLPVRLTYEDLSLHQALRRLLPP-SLDVPASFETVGHLAHLNLRAEVLPYKHLIAQVVLDKNRKRLQTVVNKVGEIGSTFRVLPLEVIGGKKDTCVRVKESGARFEFDYAQVYWNSRLQGEHARIIDLVVSEGREGGRAGAGVERVDDTGDSPPVVVWDVFAGVGPFALPLAVRGCQVYANDLNPDSYRYLCHNAALNKV 449
P R +S + H D+ LD S F V ALRLPA YC+ A++ L P L R + ++ P D LL +++ ED + + H ++ E T E P S + V L Y S + LR++ P L+ P SFETV H+AHLNLR LPYK LIAQV+LDKN R++TVVNK+G I + +R PLEV+ G+ D V V+E+GA F F++A+VYWNSRL EHAR+++ VV+ A RV VVWDVFAGVGPFA+PL +RGC V+ANDLNP S+ YL N A NKV
Sbjct: 8 PARSDTSDAVSHPDAHEEVSLDPSAFRRTFRVAALRLPAKYCNSAVKQLQPHLLRLRHVKGIV---------KPEDGGDTHRLLLLATEVNEQHEDTAVELTDLPDDVKTF-VHATNAQEDPTPAAE-------AEPPCSRVSLTTHQVHLDYASFSAEEVLRQVFAPLRLEAPTSFETVDHVAHLNLRDAHLPYKRLIAQVILDKNAPRIRTVVNKLGSIQTQYRTFPLEVLAGESDLNVSVREAGATFRFNFAEVYWNSRLSTEHARLVNAVVAHFH------ASRPRVPLAS----CVVWDVFAGVGPFAIPLGLRGCVVHANDLNPRSHHYLVDNIARNKV 325
BLAST of EWM21178.1 vs. NCBI_GenBank
Match: gi|553181407|ref|XP_005853561.1| (trna (guanine-n -)-methyltransferase-like protein [Nannochloropsis gaditana CCMP526] >gi|422295498|gb|EKU22797.1| trna (guanine-n -)-methyltransferase-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 203.371 bits (516), Expect = 2.307e-56 Identity = 106/197 (53.81%), Postives = 132/197 (67.01%), Query Frame = 0
Query: 254 VRLTYEDLSLHQALRRLLPP-SLDVPASFETVGHLAHLNLRAEVLPYKHLIAQVVLDKNRKRLQTVVNKVGEIGSTFRVLPLEVIGGKKDTCVRVKESGARFEFDYAQVYWNSRLQGEHARIIDLVVSEGREGGRAGAGVERVDDTGDSPPVVVWDVFAGVGPFALPLAVRGCQVYANDLNPDSYRYLCHNAALNKV 449
V L Y S + LR++ P L+ P SFETV H+AHLNLR LPYK LIAQV+LDKN R++TVVNK+G I + +R PLEV+ G+ D V V+E+GA F F++A+VYWNSRL EHAR+++ VV+ A RV VVWDVFAGVGPFA+PL +RGC V+ANDLNP S+ YL N A NKV
Sbjct: 85 VHLDYASFSAEEVLRQVFAPLRLEAPTSFETVDHVAHLNLRDAHLPYKRLIAQVILDKNAPRIRTVVNKLGSIQTQYRTFPLEVLAGESDLNVSVREAGATFRFNFAEVYWNSRLSTEHARLVNAVVAHFH------ASRPRV----PLASCVVWDVFAGVGPFAIPLGLRGCVVHANDLNPRSHHYLVDNIARNKV 271
BLAST of EWM21178.1 vs. NCBI_GenBank
Match: gi|1109233475|ref|XP_019191550.1| (PREDICTED: tRNA (guanine(37)-N1)-methyltransferase 2-like [Ipomoea nil]) HSP 1 Score: 205.297 bits (521), Expect = 3.002e-56 Identity = 122/324 (37.65%), Postives = 174/324 (53.70%), Query Frame = 0
Query: 126 LDKSLFESECHVQALRLPAAYCHHAIQSLSPFLFRSTTQRSVMLPGRCTLPLDPPLKPDERLLLFCPPMLDDDQEDGDARARGCAEPTRQHQTHTSHGSETSTGCQELVDNLLRTIPFASLLPPPGLPVRLTYEDLSLHQALRRLLPPSLDVPASFETVGHLAHLNLRAEVLPYKHLIAQVVLDKNRKRLQTVVNKVGEIGSTFRVLPLEVIGGKKDTCVRVKESGARFEFDYAQVYWNSRLQGEHARIIDLVVSEGREGGRAGAGVERVDDTGDSPPVVVWDVFAGVGPFALPLAVRGCQVYANDLNPDSYRYLCHNAALNKV 449
LD+S F+ E + ALR+P YC+ A + L+ +L + + ++ P R+L+ + + D + A Q L D L+ + ++P + L Y S L+++LPP L+VP+SFET+GH+AHLN+ E+LPYK +IA+V+ DKN RLQT+VNK+G I + FRV E++ GK D +K+ GA F+ DY VYWNSRL+ EH R+ VS+ R G + D+FAG+GPFA+P A +GC+VYANDLNPDS RYL NAA+NKV
Sbjct: 4 LDESKFDVELKLWALRIPREYCNVATRILNGYLLDKPRIKPI---------VEDPASEKTRMLVLSEKIQNSDLSEVPA--------------------------QTLAD--LKGLCEFDVVP---YSLTLGYSYWSSDHILKQILPPGLEVPSSFETIGHIAHLNITDELLPYKDVIAKVIYDKNYPRLQTIVNKIGSITNEFRVPSFEILAGKDDLVTELKQYGATFKLDYGLVYWNSRLEHEHLRL----VSQFRAGE------------------TICDMFAGIGPFAIPAAQKGCRVYANDLNPDSARYLKINAAINKV 265
BLAST of EWM21178.1 vs. NCBI_GenBank
Match: gi|552815352|ref|XP_005844423.1| (hypothetical protein CHLNCDRAFT_139113 [Chlorella variabilis] >gi|307104065|gb|EFN52321.1| hypothetical protein CHLNCDRAFT_139113 [Chlorella variabilis]) HSP 1 Score: 204.912 bits (520), Expect = 3.606e-56 Identity = 122/324 (37.65%), Postives = 168/324 (51.85%), Query Frame = 0
Query: 128 KSLFESECHVQALRLPAAYCHHAIQSLSPFLFRSTTQRSVMLPGRCTLPLDPPLKPDERLLLFCPPMLDDDQEDGDARARGCAEPTRQH--QTHTSHGSETSTGCQELVDNLLRTIPFASLLPPPGLPVRLTYEDLSLHQALRRLLPPSLDVPASFETVGHLAHLNLRAEVLPYKHLIAQVVLDKNRKRLQTVVNKVGEIGSTFRVLPLEVIGGKKDTCVRVKESGARFEFDYAQVYWNSRLQGEHARIIDLVVSEGREGGRAGAGVERVDDTGDSPPVVVWDVFAGVGPFALPLAVRGCQVYANDLNPDSYRYLCHNAALNKV 449
K+ F+ + + A+R+P ++ LS LF R+VM P DP L+ LD Q +G A A+ AE + Q T+H V + Y H LRRLLP L+VP+SFE+VGH+AHLNLR E+LPYKHLI +V+LDKN RL++VVNK+ I + FRV P+E++ G++ T +++ GARF D+ +VYWNSRL+GEH R++ L P V D AG+GPFA+P A +GC VYANDLNP S+ YLC N +N++
Sbjct: 27 KAQFDEQIKLTAIRIPKQNTSQYMKLLSKHLFNKPRLRNVMED-----PSDPDLRLLLLEETLVEADLDSRQIEGAASAKTVAELVQADGLQVTTAH-------------------------------VDVDYSYWPAHVVLRRLLPEGLEVPSSFESVGHIAHLNLRTELLPYKHLIGKVILDKN-PRLKSVVNKLASIENEFRVFPMELVAGQEGTETELRQHGARFRLDFRKVYWNSRLEGEHQRLVQLF----------------------RPGEAVLDAMAGIGPFAIPAARKGCLVYANDLNPASFEYLCTNIRINRL 291
BLAST of EWM21178.1 vs. NCBI_GenBank
Match: gi|971511003|dbj|GAQ87203.1| (hypothetical protein KFL_003380080 [Klebsormidium nitens]) HSP 1 Score: 205.682 bits (522), Expect = 2.175e-55 Identity = 119/325 (36.62%), Postives = 165/325 (50.77%), Query Frame = 0
Query: 125 LLDKSLFESECHVQALRLPAAYCHHAIQSLSPFLFRSTTQRSVMLPGRCTLPLDPPLKPDERLLLFCPPMLDDDQEDGDARARGCAEPTRQHQTHTSHGSETSTGCQELVDNLLRTIPFASLLPPPGLPVRLTYEDLSLHQALRRLLPPSLDVPASFETVGHLAHLNLRAEVLPYKHLIAQVVLDKNRKRLQTVVNKVGEIGSTFRVLPLEVIGGKKDTCVRVKESGARFEFDYAQVYWNSRLQGEHARIIDLVVSEGREGGRAGAGVERVDDTGDSPPVVVWDVFAGVGPFALPLAVRGCQVYANDLNPDSYRYLCHNAALNKV 449
+LD+S F VQALR+P CH ++ LS F R+V++ +P+ RL+L + D G S + D + V L Y+ + Q L+ +LP +VP+SFET+GH+AH+NLR E+LPY+ +I +V+L+KN R+ TV+NKVG I + FRV EV+ G T VK+ ARF+ DYAQVYWNSRL+ EH+R++D E V+ D+FAG+GPFA+P A++GC VYANDLNP S YL N+ LNKV
Sbjct: 45 VLDRSKFVKRVTVQALRVPKGACHQLVKKLSKFKAEYPKVRNVIVE---------EARPETRLILLGENVSGLDLA----------------------GLPESVAAELKADRDVEITQHE---------VVLDYDSYTADQVLKEVLPAGAEVPSSFETIGHVAHVNLRDELLPYRRIIGEVLLEKNFPRILTVLNKVGTIENEFRVPTFEVLAGDPSTVTEVKQHSARFQLDYAQVYWNSRLEFEHSRLVDQFARED----------------------VICDMFAGIGPFAIPAALKGCAVYANDLNPQSTHYLAINSKLNKV 307
BLAST of EWM21178.1 vs. NCBI_GenBank
Match: gi|1117554385|ref|XP_019451055.1| (PREDICTED: tRNA (guanine(37)-N1)-methyltransferase 2-like [Lupinus angustifolius]) HSP 1 Score: 201.445 bits (511), Expect = 8.242e-55 Identity = 118/326 (36.20%), Postives = 172/326 (52.76%), Query Frame = 0
Query: 124 SLLDKSLFESECHVQALRLPAAYCHHAIQSLSPFLFRSTTQRSVMLPGRCTLPLDPPLKPDERLLLFCPPMLDDDQEDGDARARGCAEPTRQHQTHTSHGSETSTGCQELVDNLLRTIPFASLLPPPGLPVRLTYEDLSLHQALRRLLPPSLDVPASFETVGHLAHLNLRAEVLPYKHLIAQVVLDKNRKRLQTVVNKVGEIGSTFRVLPLEVIGGKKDTCVRVKESGARFEFDYAQVYWNSRLQGEHARIIDLVVSEGREGGRAGAGVERVDDTGDSPPVVVWDVFAGVGPFALPLAVRGCQVYANDLNPDSYRYLCHNAALNKV 449
++LD++ FE + ++ ALR+P C A + L+ +LF + V ++ PL R L+ + D D + E C+ +P++ + L Y S L+++LPP +DVP+SFET+GH+AHLNL E+LPYK +IA+V+ DKN R++TVVNKVG I + FRV EV+ G+ D VK+ G F+ D++ VYWNSRL+ EH+R+ VS+ + P + D+FAG+GPFA+P A +GC VYANDLNPDS +YL NA +NKV
Sbjct: 9 AMLDETKFEQKLNLWALRIPCKLCKLATRILNGYLFDKPRVKPV---------VEDPLCQKNRYLVLSDKVKSQDLSDIPEKKL----------------DELKGLCE------FEVVPYS---------LTLGYSYWSADHVLKQILPPGVDVPSSFETIGHIAHLNLHDELLPYKDVIAKVIYDKNYPRIKTVVNKVGTITNEFRVPEFEVLAGEHDMITEVKQYGVTFKLDFSLVYWNSRLEHEHSRL----VSQFK------------------PGETICDMFAGIGPFAIPAAQKGCIVYANDLNPDSIKYLKVNAKINKV 272
BLAST of EWM21178.1 vs. NCBI_GenBank
Match: gi|1026097003|ref|XP_016547650.1| (PREDICTED: tRNA (guanine(37)-N1)-methyltransferase 2 isoform X7 [Capsicum annuum] >gi|1026097005|ref|XP_016547651.1| PREDICTED: tRNA (guanine(37)-N1)-methyltransferase 2 isoform X7 [Capsicum annuum]) HSP 1 Score: 199.519 bits (506), Expect = 9.320e-55 Identity = 120/330 (36.36%), Postives = 173/330 (52.42%), Query Frame = 0
Query: 126 LDKSLFESECHVQALRLPAAYCHHAIQSLSPFLFRSTTQRSVMLPGRCTLPLDPPLKPDERLLLFCPPMLDDDQEDGDARARGCAEPTRQHQTHTSHGSETSTGCQELVDNLLRTIPFASLLPPPGLPVRLTYEDLSLHQALRRLLPPSLDVPASFETVGHLAHLNLRAEVLPYKHLIAQVVLDKNRKRLQTVVNKVGEIGSTFRVLPLEVIGGKKDTCVRVKESGARFEFDYAQVYWNSRLQGEHARIIDLVVSEGREGGRAGAGVERVDDTGDSPPVVVWDVFAGVGPFALPLAVRGCQVYANDLNPDSYRYLCHNAALNKVP-LSFP 454
LD+S F+ + + ALR+P +C A++ L+ LF + + + P R ++F + + D D A+ +E CQ +P + + L Y L+++LPP L+VP+SFET+GH+AH+N+ E+LPY+ +IA+V+ DKN R+QTVVNKVG I + FRV EV+ GK D VK+ GA F+ DY+ VYWNSRL+ EH R+ VS+ + G + D+FAG+GPFA+P A +GC VYANDLNPDS RYL NA ++K+ L FP
Sbjct: 4 LDESKFDMQLKLWALRIPREHCKSAMKILNGHLFDRPRIKPIT---------EDPTNGKTRYMIFSEKVKNPDLSDIPAQKL----------------AELKGLCQ------FEVVPHS---------LTLGYSYWGADHILKQILPPGLEVPSSFETIGHIAHMNITDELLPYRDVIAKVIYDKNYPRIQTVVNKVGTITNEFRVPKFEVLAGKDDMVTEVKQYGATFKLDYSLVYWNSRLEHEHIRL----VSKFQSGE------------------TICDMFAGIGPFAIPAAQKGCAVYANDLNPDSIRYLKTNAEISKIDHLVFP 271
BLAST of EWM21178.1 vs. NCBI_GenBank
Match: gi|325191906|emb|CCA26377.1| (unnamed protein product [Albugo laibachii Nc14]) HSP 1 Score: 199.134 bits (505), Expect = 1.059e-54 Identity = 104/196 (53.06%), Postives = 125/196 (63.78%), Query Frame = 0
Query: 254 VRLTYEDLSLHQALRRLLPPSLDVPASFETVGHLAHLNLRAEVLPYKHLIAQVVLDKNRKRLQTVVNKVGEIGSTFRVLPLEVIGGKKDTCVRVKESGARFEFDYAQVYWNSRLQGEHARIIDLVVSEGREGGRAGAGVERVDDTGDSPPVVVWDVFAGVGPFALPLAVRGCQVYANDLNPDSYRYLCHNAALNKV 449
V L+Y ++ Q L +LLP + VP+SFE VGH+AHLNLR LP+KHLI QV+LDKN +QTVVNK I + +R P+E++ GK D V V ES A F F+YA+VYWNSRLQ EHARII L D+ VV D+ AGVGPFA+PLA +GC VYANDLNP SYRYL N NKV
Sbjct: 107 VELSYTHFNVEQVLAKLLPKQVQVPSSFECVGHIAHLNLREAHLPFKHLIGQVILDKN-PHIQTVVNKTDSIETKYRTFPMEILAGKDDFNVTVHESRAVFCFNYAEVYWNSRLQHEHARIIRLF---------------------DAKRDVVCDMMAGVGPFAIPLARKGCVVYANDLNPHSYRYLLENIKRNKV 280 The following BLAST results are available for this feature:
BLAST of EWM21178.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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