EWM21184.1, cds9489 (CDS) Nannochloropsis gaditana

Overview
NameEWM21184.1
Unique Namecds9489
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:52283..52390 +
Alignment locationKK037254.1:52598..52647 +
Alignment locationKK037254.1:52829..53273 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21184.1
Productn-acetylglutamate synthase
Orig transcript idgnl|cribi|Naga_101699g1.3594.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:52283..52390 +
KK037254.1supercontigKK037254.1:52598..52647 +
KK037254.1supercontigKK037254.1:52829..53273 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005737cytoplasm
Homology
BLAST of EWM21184.1 vs. NCBI_GenBank
Match: gi|585101260|gb|EWM21184.1| (n-acetylglutamate synthase [Nannochloropsis gaditana])

HSP 1 Score: 404.445 bits (1038), Expect = 1.113e-142
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
Query:    1 MQWFLERGFEERSVGALPESRRDIYNWERKSKIYMKDIKTVRDLDAEELFYNVGERRDGAFEGRPGAREKGRSKRSVDDCDLRNDHQWFLSPASGGSRGKRLLPFGAWATQTHAVSGVPALWAQPPLSRIRSLARPSCPTATSSLHRRGDLDQSSRDSPSLQALTLRVVLDSPQPQGRKRGASFASASSMLDAARGPWGG 200
            MQWFLERGFEERSVGALPESRRDIYNWERKSKIYMKDIKTVRDLDAEELFYNVGERRDGAFEGRPGAREKGRSKRSVDDCDLRNDHQWFLSPASGGSRGKRLLPFGAWATQTHAVSGVPALWAQPPLSRIRSLARPSCPTATSSLHRRGDLDQSSRDSPSLQALTLRVVLDSPQPQGRKRGASFASASSMLDAARGPWGG
Sbjct:    1 MQWFLERGFEERSVGALPESRRDIYNWERKSKIYMKDIKTVRDLDAEELFYNVGERRDGAFEGRPGAREKGRSKRSVDDCDLRNDHQWFLSPASGGSRGKRLLPFGAWATQTHAVSGVPALWAQPPLSRIRSLARPSCPTATSSLHRRGDLDQSSRDSPSLQALTLRVVLDSPQPQGRKRGASFASASSMLDAARGPWGG 200          
BLAST of EWM21184.1 vs. NCBI_GenBank
Match: gi|1072235993|gb|OEU20721.1| (N-acetylglutamate synthase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 71.633 bits (174), Expect = 3.657e-11
Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    1 MQWFLERGFEERSVGALPESRRDIYNWERKSKIYMKDIKTVRDLDAEELFYN 52
            M+WF+ERGF+E  V  LP SR+  YN++R SKIYMK I ++RDLDA ELF++
Sbjct:  388 MEWFIERGFDEVGVDLLPPSRQATYNYDRASKIYMKKINSLRDLDANELFWD 439          
BLAST of EWM21184.1 vs. NCBI_GenBank
Match: gi|1210522117|dbj|GAX18879.1| (amino-acid N-acetyltransferase [Fistulifera solaris])

HSP 1 Score: 71.2478 bits (173), Expect = 4.438e-11
Identity = 34/52 (65.38%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    1 MQWFLERGFEERSVGALPESRRDIYNWERKSKIYMKDIKTVRDLDAEELFYN 52
            M+WFLERGFEE  V  LP SR+  YN  RKSKIY+K I++VRDLDA EL++N
Sbjct:  551 MEWFLERGFEEVGVEELPPSRQATYNHVRKSKIYLKRIESVRDLDANELWWN 602          
BLAST of EWM21184.1 vs. NCBI_GenBank
Match: gi|1210529366|dbj|GAX12000.1| (hypothetical protein FisN_8Lh094 [Fistulifera solaris])

HSP 1 Score: 70.8626 bits (172), Expect = 5.137e-11
Identity = 34/52 (65.38%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    1 MQWFLERGFEERSVGALPESRRDIYNWERKSKIYMKDIKTVRDLDAEELFYN 52
            M+WFLERGFEE  V  LP SR+  YN  RKSKIY+K I++VRDLDA EL++N
Sbjct:  343 MEWFLERGFEEVGVEELPPSRQATYNHVRKSKIYLKRIESVRDLDANELWWN 394          
BLAST of EWM21184.1 vs. NCBI_GenBank
Match: gi|397576532|gb|EJK50311.1| (hypothetical protein THAOC_30739 [Thalassiosira oceanica])

HSP 1 Score: 70.4774 bits (171), Expect = 1.174e-10
Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 0
Query:    1 MQWFLERGFEERSVGALPESRRDIYNWERKSKIYMKDIKTVRDLDAEEL 49
            M+WF+ERGF E  VG+LP SR+ +YN +RKSKIYMK I   RDLDA EL
Sbjct:  909 MEWFVERGFREVQVGSLPPSRQSVYNNKRKSKIYMKVINGTRDLDAAEL 957          
BLAST of EWM21184.1 vs. NCBI_GenBank
Match: gi|224012835|ref|XP_002295070.1| (hypothetical protein THAPSDRAFT_30701 [Thalassiosira pseudonana CCMP1335] >gi|220969509|gb|EED87850.1| hypothetical protein THAPSDRAFT_30701 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 65.855 bits (159), Expect = 3.419e-9
Identity = 31/49 (63.27%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    1 MQWFLERGFEERSVGALPESRRDIYNWERKSKIYMKDIKTVRDLDAEEL 49
            M+WF+ERGF+E  V +LP SR+ +YN +RKSKIYMK+I   RDLDA EL
Sbjct:  398 MEWFVERGFKEVPVESLPPSRQALYNTKRKSKIYMKEINGDRDLDAAEL 446          
BLAST of EWM21184.1 vs. NCBI_GenBank
Match: gi|298705936|emb|CBJ29066.1| (Amino-acid N-acetyltransferase [Ectocarpus siliculosus])

HSP 1 Score: 65.4698 bits (158), Expect = 5.249e-9
Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 0
Query:    1 MQWFLERGFEERSVGALPESRRDIYNWERKSKIYMKDI-KTVRDLDAEELFYNV 53
            MQWF+ERGF E  V  LP  RR+ YNWER SKIY K +   VR +DAEEL ++V
Sbjct:  440 MQWFVERGFRESQVSDLPPERRESYNWERMSKIYHKTLGGGVRAVDAEELLWDV 493          
BLAST of EWM21184.1 vs. NCBI_GenBank
Match: gi|676396463|ref|XP_009041509.1| (putative amino acid N-acetyltransferase [Aureococcus anophagefferens] >gi|323447872|gb|EGB03779.1| putative amino acid N-acetyltransferase [Aureococcus anophagefferens])

HSP 1 Score: 62.3882 bits (150), Expect = 5.117e-8
Identity = 26/52 (50.00%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    1 MQWFLERGFEERSVGALPESRRDIYNWERKSKIYMKDIKTVRDLDAEELFYN 52
            MQWF+ERGF+E ++  LP+ RRDIY+  R+ K+Y K +K  RD+D E+ F+ 
Sbjct:  483 MQWFVERGFDEVTLDLLPQERRDIYDNSRRPKVYRKVLKADRDVDVEDAFWT 534          
BLAST of EWM21184.1 vs. NCBI_GenBank
Match: gi|551556556|ref|XP_005765397.1| (N-acetylglutamate synthase [Emiliania huxleyi CCMP1516] >gi|551565026|ref|XP_005769022.1| hypothetical protein EMIHUDRAFT_470402 [Emiliania huxleyi CCMP1516] >gi|485615345|gb|EOD12968.1| N-acetylglutamate synthase [Emiliania huxleyi CCMP1516] >gi|485619879|gb|EOD16593.1| hypothetical protein EMIHUDRAFT_470402 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 62.003 bits (149), Expect = 7.129e-8
Identity = 28/51 (54.90%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    1 MQWFLERGFEERSVGALPESRRDIYNWERKSKIYMKDIKTVRDLDAEELFY 51
            MQWF ERGF E  V  LPE R+   N  R SK++MK + + R+LDAEELF+
Sbjct:  585 MQWFTERGFVEVPVSELPERRQRTINLARGSKVFMKGLNSPRELDAEELFW 635          
BLAST of EWM21184.1 vs. NCBI_GenBank
Match: gi|676386291|ref|XP_009036424.1| (hypothetical protein AURANDRAFT_71410 [Aureococcus anophagefferens] >gi|323453456|gb|EGB09328.1| hypothetical protein AURANDRAFT_71410 [Aureococcus anophagefferens])

HSP 1 Score: 61.6178 bits (148), Expect = 9.707e-8
Identity = 25/52 (48.08%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 MQWFLERGFEERSVGALPESRRDIYNWERKSKIYMKDIKTVRDLDAEELFYN 52
            MQWF+ERGF E ++ +LP+ RRD+Y+  R  K+Y K +K  RD+D E+ F+ 
Sbjct:  516 MQWFVERGFIEATLASLPQERRDVYDSSRMPKVYRKALKADRDVDVEDAFWT 567          
The following BLAST results are available for this feature:
BLAST of EWM21184.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101260|gb|EWM21184.1|1.113e-142100.00n-acetylglutamate synthase [Nannochloropsis gadita... [more]
gi|1072235993|gb|OEU20721.1|3.657e-1159.62N-acetylglutamate synthase [Fragilariopsis cylindr... [more]
gi|1210522117|dbj|GAX18879.1|4.438e-1165.38amino-acid N-acetyltransferase [Fistulifera solari... [more]
gi|1210529366|dbj|GAX12000.1|5.137e-1165.38hypothetical protein FisN_8Lh094 [Fistulifera sola... [more]
gi|397576532|gb|EJK50311.1|1.174e-1065.31hypothetical protein THAOC_30739 [Thalassiosira oc... [more]
gi|224012835|ref|XP_002295070.1|3.419e-963.27hypothetical protein THAPSDRAFT_30701 [Thalassiosi... [more]
gi|298705936|emb|CBJ29066.1|5.249e-959.26Amino-acid N-acetyltransferase [Ectocarpus silicul... [more]
gi|676396463|ref|XP_009041509.1|5.117e-850.00putative amino acid N-acetyltransferase [Aureococc... [more]
gi|551556556|ref|XP_005765397.1|7.129e-854.90N-acetylglutamate synthase [Emiliania huxleyi CCMP... [more]
gi|676386291|ref|XP_009036424.1|9.707e-848.08hypothetical protein AURANDRAFT_71410 [Aureococcus... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9520rna9520Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications