EWM21184.1, cds9489 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21184.1 vs. NCBI_GenBank
Match: gi|585101260|gb|EWM21184.1| (n-acetylglutamate synthase [Nannochloropsis gaditana]) HSP 1 Score: 404.445 bits (1038), Expect = 1.113e-142 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
Query: 1 MQWFLERGFEERSVGALPESRRDIYNWERKSKIYMKDIKTVRDLDAEELFYNVGERRDGAFEGRPGAREKGRSKRSVDDCDLRNDHQWFLSPASGGSRGKRLLPFGAWATQTHAVSGVPALWAQPPLSRIRSLARPSCPTATSSLHRRGDLDQSSRDSPSLQALTLRVVLDSPQPQGRKRGASFASASSMLDAARGPWGG 200
MQWFLERGFEERSVGALPESRRDIYNWERKSKIYMKDIKTVRDLDAEELFYNVGERRDGAFEGRPGAREKGRSKRSVDDCDLRNDHQWFLSPASGGSRGKRLLPFGAWATQTHAVSGVPALWAQPPLSRIRSLARPSCPTATSSLHRRGDLDQSSRDSPSLQALTLRVVLDSPQPQGRKRGASFASASSMLDAARGPWGG
Sbjct: 1 MQWFLERGFEERSVGALPESRRDIYNWERKSKIYMKDIKTVRDLDAEELFYNVGERRDGAFEGRPGAREKGRSKRSVDDCDLRNDHQWFLSPASGGSRGKRLLPFGAWATQTHAVSGVPALWAQPPLSRIRSLARPSCPTATSSLHRRGDLDQSSRDSPSLQALTLRVVLDSPQPQGRKRGASFASASSMLDAARGPWGG 200
BLAST of EWM21184.1 vs. NCBI_GenBank
Match: gi|1072235993|gb|OEU20721.1| (N-acetylglutamate synthase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 71.633 bits (174), Expect = 3.657e-11 Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 0
Query: 1 MQWFLERGFEERSVGALPESRRDIYNWERKSKIYMKDIKTVRDLDAEELFYN 52
M+WF+ERGF+E V LP SR+ YN++R SKIYMK I ++RDLDA ELF++
Sbjct: 388 MEWFIERGFDEVGVDLLPPSRQATYNYDRASKIYMKKINSLRDLDANELFWD 439
BLAST of EWM21184.1 vs. NCBI_GenBank
Match: gi|1210522117|dbj|GAX18879.1| (amino-acid N-acetyltransferase [Fistulifera solaris]) HSP 1 Score: 71.2478 bits (173), Expect = 4.438e-11 Identity = 34/52 (65.38%), Postives = 41/52 (78.85%), Query Frame = 0
Query: 1 MQWFLERGFEERSVGALPESRRDIYNWERKSKIYMKDIKTVRDLDAEELFYN 52
M+WFLERGFEE V LP SR+ YN RKSKIY+K I++VRDLDA EL++N
Sbjct: 551 MEWFLERGFEEVGVEELPPSRQATYNHVRKSKIYLKRIESVRDLDANELWWN 602
BLAST of EWM21184.1 vs. NCBI_GenBank
Match: gi|1210529366|dbj|GAX12000.1| (hypothetical protein FisN_8Lh094 [Fistulifera solaris]) HSP 1 Score: 70.8626 bits (172), Expect = 5.137e-11 Identity = 34/52 (65.38%), Postives = 41/52 (78.85%), Query Frame = 0
Query: 1 MQWFLERGFEERSVGALPESRRDIYNWERKSKIYMKDIKTVRDLDAEELFYN 52
M+WFLERGFEE V LP SR+ YN RKSKIY+K I++VRDLDA EL++N
Sbjct: 343 MEWFLERGFEEVGVEELPPSRQATYNHVRKSKIYLKRIESVRDLDANELWWN 394
BLAST of EWM21184.1 vs. NCBI_GenBank
Match: gi|397576532|gb|EJK50311.1| (hypothetical protein THAOC_30739 [Thalassiosira oceanica]) HSP 1 Score: 70.4774 bits (171), Expect = 1.174e-10 Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 0
Query: 1 MQWFLERGFEERSVGALPESRRDIYNWERKSKIYMKDIKTVRDLDAEEL 49
M+WF+ERGF E VG+LP SR+ +YN +RKSKIYMK I RDLDA EL
Sbjct: 909 MEWFVERGFREVQVGSLPPSRQSVYNNKRKSKIYMKVINGTRDLDAAEL 957
BLAST of EWM21184.1 vs. NCBI_GenBank
Match: gi|224012835|ref|XP_002295070.1| (hypothetical protein THAPSDRAFT_30701 [Thalassiosira pseudonana CCMP1335] >gi|220969509|gb|EED87850.1| hypothetical protein THAPSDRAFT_30701 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 65.855 bits (159), Expect = 3.419e-9 Identity = 31/49 (63.27%), Postives = 39/49 (79.59%), Query Frame = 0
Query: 1 MQWFLERGFEERSVGALPESRRDIYNWERKSKIYMKDIKTVRDLDAEEL 49
M+WF+ERGF+E V +LP SR+ +YN +RKSKIYMK+I RDLDA EL
Sbjct: 398 MEWFVERGFKEVPVESLPPSRQALYNTKRKSKIYMKEINGDRDLDAAEL 446
BLAST of EWM21184.1 vs. NCBI_GenBank
Match: gi|298705936|emb|CBJ29066.1| (Amino-acid N-acetyltransferase [Ectocarpus siliculosus]) HSP 1 Score: 65.4698 bits (158), Expect = 5.249e-9 Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 0
Query: 1 MQWFLERGFEERSVGALPESRRDIYNWERKSKIYMKDI-KTVRDLDAEELFYNV 53
MQWF+ERGF E V LP RR+ YNWER SKIY K + VR +DAEEL ++V
Sbjct: 440 MQWFVERGFRESQVSDLPPERRESYNWERMSKIYHKTLGGGVRAVDAEELLWDV 493
BLAST of EWM21184.1 vs. NCBI_GenBank
Match: gi|676396463|ref|XP_009041509.1| (putative amino acid N-acetyltransferase [Aureococcus anophagefferens] >gi|323447872|gb|EGB03779.1| putative amino acid N-acetyltransferase [Aureococcus anophagefferens]) HSP 1 Score: 62.3882 bits (150), Expect = 5.117e-8 Identity = 26/52 (50.00%), Postives = 38/52 (73.08%), Query Frame = 0
Query: 1 MQWFLERGFEERSVGALPESRRDIYNWERKSKIYMKDIKTVRDLDAEELFYN 52
MQWF+ERGF+E ++ LP+ RRDIY+ R+ K+Y K +K RD+D E+ F+
Sbjct: 483 MQWFVERGFDEVTLDLLPQERRDIYDNSRRPKVYRKVLKADRDVDVEDAFWT 534
BLAST of EWM21184.1 vs. NCBI_GenBank
Match: gi|551556556|ref|XP_005765397.1| (N-acetylglutamate synthase [Emiliania huxleyi CCMP1516] >gi|551565026|ref|XP_005769022.1| hypothetical protein EMIHUDRAFT_470402 [Emiliania huxleyi CCMP1516] >gi|485615345|gb|EOD12968.1| N-acetylglutamate synthase [Emiliania huxleyi CCMP1516] >gi|485619879|gb|EOD16593.1| hypothetical protein EMIHUDRAFT_470402 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 62.003 bits (149), Expect = 7.129e-8 Identity = 28/51 (54.90%), Postives = 35/51 (68.63%), Query Frame = 0
Query: 1 MQWFLERGFEERSVGALPESRRDIYNWERKSKIYMKDIKTVRDLDAEELFY 51
MQWF ERGF E V LPE R+ N R SK++MK + + R+LDAEELF+
Sbjct: 585 MQWFTERGFVEVPVSELPERRQRTINLARGSKVFMKGLNSPRELDAEELFW 635
BLAST of EWM21184.1 vs. NCBI_GenBank
Match: gi|676386291|ref|XP_009036424.1| (hypothetical protein AURANDRAFT_71410 [Aureococcus anophagefferens] >gi|323453456|gb|EGB09328.1| hypothetical protein AURANDRAFT_71410 [Aureococcus anophagefferens]) HSP 1 Score: 61.6178 bits (148), Expect = 9.707e-8 Identity = 25/52 (48.08%), Postives = 37/52 (71.15%), Query Frame = 0
Query: 1 MQWFLERGFEERSVGALPESRRDIYNWERKSKIYMKDIKTVRDLDAEELFYN 52
MQWF+ERGF E ++ +LP+ RRD+Y+ R K+Y K +K RD+D E+ F+
Sbjct: 516 MQWFVERGFIEATLASLPQERRDVYDSSRMPKVYRKALKADRDVDVEDAFWT 567 The following BLAST results are available for this feature:
BLAST of EWM21184.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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