EWM21190.1, cds9483 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21190.1 vs. NCBI_GenBank
Match: gi|585101273|gb|EWM21190.1| (transducin family protein [Nannochloropsis gaditana]) HSP 1 Score: 585.489 bits (1508), Expect = 0.000e+0 Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0 Query: 1 MEDGTVGESEEEEGVADGDEEDSVLDSEEEEEFEDQGSSSDESEVLEAQAEASGGEDGDTDDDVEYLESSDEGDRGRDEALRVEEATPRRWEPAASQAPLRALLRQGIPKGVEGTSTGRKRAEEIEVERASGRLAVAAAMHADDLSSDDEGEGEGRVWNAIGRVPLHWYDEYEHMGYDLQGKKVMRGRKGDGLDAALASRDDPNYGRTVYDAVNDRHVVLTDRDLEIIRRLQKGAFAHPEHEAYPPQVDVYCDEENIFGPSAPEPKRRFVPSKWELMKVTQMVKAIKEGRMVP 293 MEDGTVGESEEEEGVADGDEEDSVLDSEEEEEFEDQGSSSDESEVLEAQAEASGGEDGDTDDDVEYLESSDEGDRGRDEALRVEEATPRRWEPAASQAPLRALLRQGIPKGVEGTSTGRKRAEEIEVERASGRLAVAAAMHADDLSSDDEGEGEGRVWNAIGRVPLHWYDEYEHMGYDLQGKKVMRGRKGDGLDAALASRDDPNYGRTVYDAVNDRHVVLTDRDLEIIRRLQKGAFAHPEHEAYPPQVDVYCDEENIFGPSAPEPKRRFVPSKWELMKVTQMVKAIKEGRMVP Sbjct: 1 MEDGTVGESEEEEGVADGDEEDSVLDSEEEEEFEDQGSSSDESEVLEAQAEASGGEDGDTDDDVEYLESSDEGDRGRDEALRVEEATPRRWEPAASQAPLRALLRQGIPKGVEGTSTGRKRAEEIEVERASGRLAVAAAMHADDLSSDDEGEGEGRVWNAIGRVPLHWYDEYEHMGYDLQGKKVMRGRKGDGLDAALASRDDPNYGRTVYDAVNDRHVVLTDRDLEIIRRLQKGAFAHPEHEAYPPQVDVYCDEENIFGPSAPEPKRRFVPSKWELMKVTQMVKAIKEGRMVP 293
BLAST of EWM21190.1 vs. NCBI_GenBank
Match: gi|553188524|ref|XP_005854814.1| (block of proliferation 1 [Nannochloropsis gaditana CCMP526] >gi|422294250|gb|EKU21550.1| block of proliferation 1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 376.326 bits (965), Expect = 1.735e-116 Identity = 195/198 (98.48%), Postives = 196/198 (98.99%), Query Frame = 0 Query: 1 MEDGTVGESEEEEGVADGDEEDSVLDSEEEEEFEDQGSSSDESEVLEAQAEASGGEDGDTDDDVEYLESSDEGDRGRDEALRVEEATPRRWEPAASQAPLRALLRQGIPKGVEGTSTGRKRAEEIEVERASGRLAVAAAMHADDLSSDDEGEGEGRVWNAIGRVPLHWYDEYEHMGYDLQGKKVMRGRKGDGLDAALA 198 MEDGTVGESEEEEGVADGDEEDSVLDSEEEEEFEDQGSSSDESEVLEAQAEASGGEDGDTDDDVEYLESSDEGDR RDEALRVEEATPRRW+PAASQAPLRALLRQGIPKGVEGTSTGRKRAEEIEVERASGRLAVAAAMHADDLSSDDEGEGEGRV NAIGRVPLHWYDEYEHMGYDLQGKKVMRGRKGDGLDAALA Sbjct: 1056 MEDGTVGESEEEEGVADGDEEDSVLDSEEEEEFEDQGSSSDESEVLEAQAEASGGEDGDTDDDVEYLESSDEGDRERDEALRVEEATPRRWQPAASQAPLRALLRQGIPKGVEGTSTGRKRAEEIEVERASGRLAVAAAMHADDLSSDDEGEGEGRVRNAIGRVPLHWYDEYEHMGYDLQGKKVMRGRKGDGLDAALA 1253 HSP 2 Score: 173.711 bits (439), Expect = 4.147e-45 Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 0 Query: 213 VNDRHVVLTDRDLEIIRRLQKGAFAHPEHEAYPPQVDVYCDEENIFGPSAPEPKRRFVPSKWELMKVTQMVKAIKEGRMV 292 +NDRHVVLTDRDLEIIRRLQKGAFAHPEHEAYPPQVDVYCDEENIFGPSAPEPKRRFVPSKWELMKVTQMVKAIKEGRMV Sbjct: 589 LNDRHVVLTDRDLEIIRRLQKGAFAHPEHEAYPPQVDVYCDEENIFGPSAPEPKRRFVPSKWELMKVTQMVKAIKEGRMV 668
BLAST of EWM21190.1 vs. NCBI_GenBank
Match: gi|301117584|ref|XP_002906520.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262107869|gb|EEY65921.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 202.601 bits (514), Expect = 4.053e-56 Identity = 96/172 (55.81%), Postives = 127/172 (73.84%), Query Frame = 0 Query: 121 RAEEIEVERASGRLAVAAAMHADDLSSDDEGEGEGRVWNAIGRVPLHWYDEYEHMGYDLQGKKVMRGRKGDGLDAALASRDDPNYGRTVYDAVNDRHVVLTDRDLEIIRRLQKGAFAHPEHEAYPPQVDVYCDEENIFGP-SAPEPKRRFVPSKWELMKVTQMVKAIKEGRM 291 R +E++ R G L+VA+ +H DDLSSDDE N IG VPL WY++Y+H+GY++ GKK+M+ GDG+D A+A++DDPNY RTVYDA NDR +V++DRD+EIIRR+Q GAFAHPE EAYP VD+Y + I + EPK RF+PSKWE MKV +++K IKEGR+ Sbjct: 73 REKEVQKMREDGSLSVASQLHVDDLSSDDEENV-----NTIGNVPLRWYEDYDHIGYNVDGKKIMKSNNGDGIDNAIAAKDDPNYDRTVYDAYNDRKIVISDRDMEIIRRMQAGAFAHPEFEAYPDYVDIYSSNKIIHSMGNDLEPKSRFLPSKWERMKVMKIMKGIKEGRI 239
BLAST of EWM21190.1 vs. NCBI_GenBank
Match: gi|953500761|emb|CEG37794.1| (ribosome biogenesis protein bop1-like [Plasmopara halstedii]) HSP 1 Score: 203.371 bits (516), Expect = 4.432e-56 Identity = 98/172 (56.98%), Postives = 126/172 (73.26%), Query Frame = 0 Query: 121 RAEEIEVERASGRLAVAAAMHADDLSSDDEGEGEGRVWNAIGRVPLHWYDEYEHMGYDLQGKKVMRGRKGDGLDAALASRDDPNYGRTVYDAVNDRHVVLTDRDLEIIRRLQKGAFAHPEHEAYPPQVDVYCDEENIFGP-SAPEPKRRFVPSKWELMKVTQMVKAIKEGRM 291 R E++ R G L+VA+ +H DDLSSDDE N IG VPL WY++Y+H+GY++ GKKVM+ GDG+D A+A++DDPNY RTVYDA NDR +V++DRD+EIIRR+Q GAFAHPE EAYP VD+Y + I + EPK RF+PSKWE MKV ++VK IKEGR+ Sbjct: 158 REREVQKMREDGSLSVASRLHVDDLSSDDEENV-----NTIGNVPLRWYEDYDHIGYNIDGKKVMKSNNGDGIDNAIAAKDDPNYDRTVYDAYNDRKIVISDRDMEIIRRMQAGAFAHPEFEAYPEYVDIYSSNKIIHSMGNDLEPKSRFLPSKWERMKVMKIVKGIKEGRI 324
BLAST of EWM21190.1 vs. NCBI_GenBank
Match: gi|1173957637|gb|OQS04127.1| (hypothetical protein THRCLA_03604 [Thraustotheca clavata]) HSP 1 Score: 195.282 bits (495), Expect = 1.873e-53 Identity = 94/172 (54.65%), Postives = 126/172 (73.26%), Query Frame = 0 Query: 121 RAEEIEVERASGRLAVAAAMHADDLSSDDEGEGEGRVWNAIGRVPLHWYDEYEHMGYDLQGKKVMRGRKGDGLDAALASRDDPNYGRTVYDAVNDRHVVLTDRDLEIIRRLQKGAFAHPEHEAYPPQVDVYCDEENIFGP-SAPEPKRRFVPSKWELMKVTQMVKAIKEGRM 291 R ++++ R G L +A+ +H DDLSSDDE V N IG VPL WY++Y+H+GY + G+K+++ KGDG+D A+A++DDPNY RTVYDA NDR VV++DRDLEIIRR+Q GAFAHPE EA+ VD + E+ I + EPK RF+PSKWE MKV +++K IKEGR+ Sbjct: 89 REQQLQNMRQDGSLKIASHLHIDDLSSDDE-----EVHNTIGNVPLRWYEDYDHIGYTVDGQKIIKKNKGDGIDDAIAAKDDPNYARTVYDAYNDRKVVISDRDLEIIRRIQAGAFAHPEFEAHADYVDYFTSEKMIHSLGNDQEPKARFLPSKWEKMKVMKIIKGIKEGRI 255
BLAST of EWM21190.1 vs. NCBI_GenBank
Match: gi|635372226|emb|CCI39447.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 193.741 bits (491), Expect = 9.542e-53 Identity = 93/173 (53.76%), Postives = 124/173 (71.68%), Query Frame = 0 Query: 121 RAEEIEVERASGRLAVAAAMHADDLSSDDEGEGEGRVWNAIGRVPLHWYDEYEHMGYDLQGKKVMRGRKGDGLDAALASRDDPNYGRTVYDAVNDRHVVLTDRDLEIIRRLQKGAFAHPEHEAYPPQVDVYCDEENIFGPSA-PEPKRRFVPSKWELMKVTQMVKAIKEGRMV 292 R +IE RA+G L A+ +H DDLSSDDE E R N IG VPL WYDEYEH+GY + G+K+++ + D +D L++ DDP Y RTVYDA NDR +VL++R++EIIRR++ GAFAHPE +AYP +D+Y E+ I + EPK RF+PSKWE MK+ ++ K IKEGR+V Sbjct: 122 RERQIESMRANGSLQRASHLHIDDLSSDDE---ESR--NTIGNVPLRWYDEYEHIGYSVDGRKLIKSKNSDNIDKVLSTHDDPEYNRTVYDAYNDRKIVLSEREVEIIRRIKAGAFAHPEFDAYPELLDIYSSEKMIHSMANDQEPKSRFIPSKWERMKILKIAKGIKEGRIV 289
BLAST of EWM21190.1 vs. NCBI_GenBank
Match: gi|635372227|emb|CCI39448.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 193.741 bits (491), Expect = 1.263e-52 Identity = 93/176 (52.84%), Postives = 124/176 (70.45%), Query Frame = 0 Query: 121 RAEEIEVERASGRLAVAAAMHADDLSSDDE---GEGEGRVWNAIGRVPLHWYDEYEHMGYDLQGKKVMRGRKGDGLDAALASRDDPNYGRTVYDAVNDRHVVLTDRDLEIIRRLQKGAFAHPEHEAYPPQVDVYCDEENIFGPSA-PEPKRRFVPSKWELMKVTQMVKAIKEGRMV 292 R +IE RA+G L A+ +H DDLSSDDE E R N IG VPL WYDEYEH+GY + G+K+++ + D +D L++ DDP Y RTVYDA NDR +VL++R++EIIRR++ GAFAHPE +AYP +D+Y E+ I + EPK RF+PSKWE MK+ ++ K IKEGR+V Sbjct: 122 RERQIESMRANGSLQRASHLHIDDLSSDDEVLRSRTESR--NTIGNVPLRWYDEYEHIGYSVDGRKLIKSKNSDNIDKVLSTHDDPEYNRTVYDAYNDRKIVLSEREVEIIRRIKAGAFAHPEFDAYPELLDIYSSEKMIHSMANDQEPKSRFIPSKWERMKILKIAKGIKEGRIV 295
BLAST of EWM21190.1 vs. NCBI_GenBank
Match: gi|1173932071|gb|OQR84191.1| (hypothetical protein ACHHYP_13740 [Achlya hypogyna]) HSP 1 Score: 190.66 bits (483), Expect = 1.249e-51 Identity = 92/172 (53.49%), Postives = 126/172 (73.26%), Query Frame = 0 Query: 121 RAEEIEVERASGRLAVAAAMHADDLSSDDEGEGEGRVWNAIGRVPLHWYDEYEHMGYDLQGKKVMRGRKGDGLDAALASRDDPNYGRTVYDAVNDRHVVLTDRDLEIIRRLQKGAFAHPEHEAYPPQVDVYCDEENIFGP-SAPEPKRRFVPSKWELMKVTQMVKAIKEGRM 291 R ++++ R G L VA+ +H DDLSSDDE V N IG VPL WY++Y+H+GY + G+K+++ +GDG+D A+A++DDPNY RTVYDA NDR VV++DR++EIIRR+Q GAFAHPE EA+ VD + E+ I + EPK RF+PSKWE MKV +++K IKEGR+ Sbjct: 105 REQQLQRMREDGSLKVASHLHIDDLSSDDE-----EVHNTIGNVPLRWYEDYDHIGYTVDGEKIIKKNQGDGIDNAIAAKDDPNYARTVYDAYNDRKVVISDREMEIIRRIQAGAFAHPEFEAHADYVDYFTSEKMIHSLGNDQEPKARFLPSKWEKMKVMKIIKGIKEGRI 271
BLAST of EWM21190.1 vs. NCBI_GenBank
Match: gi|970659812|gb|KUF97420.1| (2-oxoglutarate dehydrogenase E1 component DHKTD1 [Phytophthora nicotianae]) HSP 1 Score: 189.889 bits (481), Expect = 5.617e-51 Identity = 93/171 (54.39%), Postives = 121/171 (70.76%), Query Frame = 0 Query: 122 AEEIEVERASGRLAVAAAMHADDLSSDDEGEGEGRVWNAIGRVPLHWYDEYEHMGYDLQGKKVMRGRKGDGLDAALASRDDPNYGRTVYDAVNDRHVVLTDRDLEIIRRLQKGAFAHPEHEAYPPQVDVYCDEENIFGP-SAPEPKRRFVPSKWELMKVTQMVKAIKEGRM 291 AE E+E+ + R +H DDLSSDDE N IG VPL WY++Y+H+GY++ GKK+M+ GDG+D A+A++DDP Y RTVYDA NDR +V++DRD+EIIRR+Q GAFAHPE EAYP VD+Y I + EPK RF+PSKWE MKV +++K IKEGR+ Sbjct: 285 AELTELEKKTRRFT----LHVDDLSSDDEENV-----NTIGNVPLRWYEDYDHIGYNVDGKKIMKSNNGDGIDDAIAAKDDPYYDRTVYDAYNDRKIVISDRDMEIIRRMQAGAFAHPEFEAYPDYVDIYSSNTIIHAMGNDLEPKSRFLPSKWERMKVMKIMKGIKEGRI 446
BLAST of EWM21190.1 vs. NCBI_GenBank
Match: gi|813119637|ref|XP_012196330.1| (hypothetical protein SPRG_02364 [Saprolegnia parasitica CBS 223.65] >gi|641538842|gb|KDO32663.1| hypothetical protein SPRG_02364 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 186.037 bits (471), Expect = 5.866e-50 Identity = 89/172 (51.74%), Postives = 124/172 (72.09%), Query Frame = 0 Query: 121 RAEEIEVERASGRLAVAAAMHADDLSSDDEGEGEGRVWNAIGRVPLHWYDEYEHMGYDLQGKKVMRGRKGDGLDAALASRDDPNYGRTVYDAVNDRHVVLTDRDLEIIRRLQKGAFAHPEHEAYPPQVDVYCDEENIFGP-SAPEPKRRFVPSKWELMKVTQMVKAIKEGRM 291 R E ++ R G L VA+ +H DDLSSDDE V N IG VPL WY++Y+H+GY + G+K+++ +GDG+D A+A++DDPNY RT+YDA NDR V+++DR++EIIRR+Q GAFAHPE + + VD + E+ I + EPK RF+PSKWE MKV +++K IKEGR+ Sbjct: 104 REEMLQRMREDGSLKVASHLHMDDLSSDDE-----EVHNTIGNVPLRWYEDYDHIGYTVDGQKIIKQNQGDGIDNAIAAKDDPNYARTIYDAYNDRKVIISDREMEIIRRIQAGAFAHPEFQEHQDYVDYFTSEKMIHSLGNDQEPKARFLPSKWEKMKVVKIMKGIKEGRI 270 The following BLAST results are available for this feature:
BLAST of EWM21190.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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