EWM21191.1, cds9482 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21191.1 vs. NCBI_GenBank
Match: gi|585101275|gb|EWM21191.1| (ribosome biogenesis protein bop1, partial [Nannochloropsis gaditana]) HSP 1 Score: 460.685 bits (1184), Expect = 5.768e-164 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
Query: 1 GGDGLVLGMEGGGSVTDVRWHGKGDYLASLVPTAGGKAVMIHQISRGKTQCPFKKTHGQVQAVAFHPHKPFFFLATQTHVRVYHLVKQVLMKKLLSGCKWISSLDIHPTGDHVLVSSYDRRVVWFDLDLSSLPYKTLKYHSKAVRAVAFHRSYPLMASGADDGTVHVFHATVYDDLMQNPLVVPVKILRGHAVVGEVGVMALAFHPTQPWVFSGGADGKVVLYQDAF 227
GGDGLVLGMEGGGSVTDVRWHGKGDYLASLVPTAGGKAVMIHQISRGKTQCPFKKTHGQVQAVAFHPHKPFFFLATQTHVRVYHLVKQVLMKKLLSGCKWISSLDIHPTGDHVLVSSYDRRVVWFDLDLSSLPYKTLKYHSKAVRAVAFHRSYPLMASGADDGTVHVFHATVYDDLMQNPLVVPVKILRGHAVVGEVGVMALAFHPTQPWVFSGGADGKVVLYQDAF
Sbjct: 1 GGDGLVLGMEGGGSVTDVRWHGKGDYLASLVPTAGGKAVMIHQISRGKTQCPFKKTHGQVQAVAFHPHKPFFFLATQTHVRVYHLVKQVLMKKLLSGCKWISSLDIHPTGDHVLVSSYDRRVVWFDLDLSSLPYKTLKYHSKAVRAVAFHRSYPLMASGADDGTVHVFHATVYDDLMQNPLVVPVKILRGHAVVGEVGVMALAFHPTQPWVFSGGADGKVVLYQDAF 227
BLAST of EWM21191.1 vs. NCBI_GenBank
Match: gi|553188524|ref|XP_005854814.1| (block of proliferation 1 [Nannochloropsis gaditana CCMP526] >gi|422294250|gb|EKU21550.1| block of proliferation 1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 486.108 bits (1250), Expect = 1.956e-158 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0
Query: 1 GGDGLVLGMEGGGSVTDVRWHGKGDYLASLVPTAGGKAVMIHQISRGKTQCPFKKTHGQVQAVAFHPHKPFFFLATQTHVRVYHLVKQVLMKKLLSGCKWISSLDIHPTGDHVLVSSYDRRVVWFDLDLSSLPYKTLKYHSKAVRAVAFHRSYPLMASGADDGTVHVFHATVYDDLMQNPLVVPVKILRGHAVVGEVGVMALAFHPTQPWVFSGGADGKVVLYQDA 226
GGDGLVLGMEGGGSVTDVRWHGKGDYLASLVPTAGGKAVMIHQISRGKTQCPFKKTHGQVQAVAFHPHKPFFFLATQTHVRVYHLVKQVLMKKLLSGCKWISSLDIHPTGDHVLVSSYDRRVVWFDLDLSSLPYKTLKYHSKAVRAVAFHRSYPLMASGADDGTVHVFHATVYDDLMQNPLVVPVKILRGHAVVGEVGVMALAFHPTQPWVFSGGADGKVVLYQDA
Sbjct: 153 GGDGLVLGMEGGGSVTDVRWHGKGDYLASLVPTAGGKAVMIHQISRGKTQCPFKKTHGQVQAVAFHPHKPFFFLATQTHVRVYHLVKQVLMKKLLSGCKWISSLDIHPTGDHVLVSSYDRRVVWFDLDLSSLPYKTLKYHSKAVRAVAFHRSYPLMASGADDGTVHVFHATVYDDLMQNPLVVPVKILRGHAVVGEVGVMALAFHPTQPWVFSGGADGKVVLYQDA 378
BLAST of EWM21191.1 vs. NCBI_GenBank
Match: gi|1173957637|gb|OQS04127.1| (hypothetical protein THRCLA_03604 [Thraustotheca clavata]) HSP 1 Score: 334.339 bits (856), Expect = 3.395e-107 Identity = 150/224 (66.96%), Postives = 181/224 (80.80%), Query Frame = 0
Query: 2 GDGLVLGMEGGGSVTDVRWHGKGDYLASLVPTAGGKAVMIHQISRGKTQCPFKKTHGQVQAVAFHPHKPFFFLATQTHVRVYHLVKQVLMKKLLSGCKWISSLDIHPTGDHVLVSSYDRRVVWFDLDLSSLPYKTLKYHSKAVRAVAFHRSYPLMASGADDGTVHVFHATVYDDLMQNPLVVPVKILRGHAVVGEVGVMALAFHPTQPWVFSGGADGKVVLYQD 225
G G+ + + GSVTDV WH KGDYL+++VP+A AV+IHQ+S+ +Q PF K G +Q VAFHP KPFFFLATQTHVRVY+LV+Q ++KKL SG KWISSL +HPTGDHVLV SYDRR+ WFDLDLSS PYKTLKYH KA RAV FH+ YPLMAS +DDGT+H+FHA VY DL++NPL+VP+KILRGH V G +GV+ LAFHPT PW+ SGGAD + LYQ+
Sbjct: 536 GRGVRIVLHHSGSVTDVAWHYKGDYLSTVVPSADSCAVLIHQLSKRSSQNPFSKKLGAIQTVAFHPSKPFFFLATQTHVRVYNLVQQAMVKKLSSGVKWISSLHVHPTGDHVLVGSYDRRLCWFDLDLSSTPYKTLKYHEKATRAVGFHKKYPLMASASDDGTIHIFHAMVYSDLIKNPLIVPLKILRGHEVTGGLGVLTLAFHPTLPWIASGGADNTIRLYQN 759
BLAST of EWM21191.1 vs. NCBI_GenBank
Match: gi|325185433|emb|CCA19917.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 329.331 bits (843), Expect = 7.687e-105 Identity = 142/211 (67.30%), Postives = 176/211 (83.41%), Query Frame = 0
Query: 15 VTDVRWHGKGDYLASLVPTAGGKAVMIHQISRGKTQCPFKKTHGQVQAVAFHPHKPFFFLATQTHVRVYHLVKQVLMKKLLSGCKWISSLDIHPTGDHVLVSSYDRRVVWFDLDLSSLPYKTLKYHSKAVRAVAFHRSYPLMASGADDGTVHVFHATVYDDLMQNPLVVPVKILRGHAVVGEVGVMALAFHPTQPWVFSGGADGKVVLYQD 225
V D+ WH KGDYLAS+ PTAG AV+IHQIS+ KTQ PF+K G VQ+V FHP KPF F ATQ HVRVY+L+KQ L+KKL SG KWISSLD+HP+GDH+++ SYDRR+ WFDLDLSS P+KTLKYH KA+RAV++H +PLMAS +DDGTVH+FHA VY DL++NPL+VP+KILRGH + G++GVMA+AFHP PW+ +GGADG V L+Q+
Sbjct: 591 VKDIAWHYKGDYLASVTPTAGAAAVLIHQISKKKTQNPFRKNLGTVQSVLFHPTKPFLFHATQRHVRVYNLIKQTLVKKLSSGVKWISSLDVHPSGDHLIIGSYDRRLCWFDLDLSSTPFKTLKYHEKAIRAVSYHSKHPLMASCSDDGTVHIFHAMVYSDLIKNPLIVPLKILRGHQICGDLGVMAVAFHPALPWLVTGGADGTVRLFQN 801
BLAST of EWM21191.1 vs. NCBI_GenBank
Match: gi|635372227|emb|CCI39448.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 329.717 bits (844), Expect = 7.723e-105 Identity = 140/211 (66.35%), Postives = 177/211 (83.89%), Query Frame = 0
Query: 15 VTDVRWHGKGDYLASLVPTAGGKAVMIHQISRGKTQCPFKKTHGQVQAVAFHPHKPFFFLATQTHVRVYHLVKQVLMKKLLSGCKWISSLDIHPTGDHVLVSSYDRRVVWFDLDLSSLPYKTLKYHSKAVRAVAFHRSYPLMASGADDGTVHVFHATVYDDLMQNPLVVPVKILRGHAVVGEVGVMALAFHPTQPWVFSGGADGKVVLYQD 225
V D+ WH KGDYLA++ P+AG AV+IHQIS+ KTQ PF+K+ G VQ+V FHP KPF F ATQ HVRVY+L+KQ L+KKL SG KWISS+D+HP+GDHV++ SYDRR+ WFDLDLSS PYKTLKYH KA+RAV++H +PLMAS +DDGTVH+FHA VY DL++NPL+VP+KILRGH + G++GVM +AFHP+ PW+ +GGADG V L+Q+
Sbjct: 599 VKDIAWHYKGDYLAAVTPSAGSAAVLIHQISKKKTQNPFRKSMGSVQSVLFHPSKPFLFHATQRHVRVYNLIKQTLVKKLSSGVKWISSMDVHPSGDHVIIGSYDRRLCWFDLDLSSTPYKTLKYHEKAIRAVSYHSKHPLMASCSDDGTVHIFHAMVYSDLIKNPLIVPLKILRGHQICGDLGVMTVAFHPSLPWLVTGGADGTVRLFQN 809
BLAST of EWM21191.1 vs. NCBI_GenBank
Match: gi|635372226|emb|CCI39447.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 329.331 bits (843), Expect = 8.032e-105 Identity = 140/211 (66.35%), Postives = 177/211 (83.89%), Query Frame = 0
Query: 15 VTDVRWHGKGDYLASLVPTAGGKAVMIHQISRGKTQCPFKKTHGQVQAVAFHPHKPFFFLATQTHVRVYHLVKQVLMKKLLSGCKWISSLDIHPTGDHVLVSSYDRRVVWFDLDLSSLPYKTLKYHSKAVRAVAFHRSYPLMASGADDGTVHVFHATVYDDLMQNPLVVPVKILRGHAVVGEVGVMALAFHPTQPWVFSGGADGKVVLYQD 225
V D+ WH KGDYLA++ P+AG AV+IHQIS+ KTQ PF+K+ G VQ+V FHP KPF F ATQ HVRVY+L+KQ L+KKL SG KWISS+D+HP+GDHV++ SYDRR+ WFDLDLSS PYKTLKYH KA+RAV++H +PLMAS +DDGTVH+FHA VY DL++NPL+VP+KILRGH + G++GVM +AFHP+ PW+ +GGADG V L+Q+
Sbjct: 593 VKDIAWHYKGDYLAAVTPSAGSAAVLIHQISKKKTQNPFRKSMGSVQSVLFHPSKPFLFHATQRHVRVYNLIKQTLVKKLSSGVKWISSMDVHPSGDHVIIGSYDRRLCWFDLDLSSTPYKTLKYHEKAIRAVSYHSKHPLMASCSDDGTVHIFHAMVYSDLIKNPLIVPLKILRGHQICGDLGVMTVAFHPSLPWLVTGGADGTVRLFQN 803
BLAST of EWM21191.1 vs. NCBI_GenBank
Match: gi|1072235618|gb|OEU20347.1| (BOP1NT-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 325.865 bits (834), Expect = 9.450e-105 Identity = 142/225 (63.11%), Postives = 178/225 (79.11%), Query Frame = 0
Query: 1 GGDGLVLGMEGGGSVTDVRWHGKGDYLASLVPTAGGKAVMIHQISRGKTQCPFKKTHGQVQAVAFHPHKPFFFLATQTHVRVYHLVKQVLMKKLLSGCKWISSLDIHPTGDHVLVSSYDRRVVWFDLDLSSLPYKTLKYHSKAVRAVAFHRSYPLMASGADDGTVHVFHATVYDDLMQNPLVVPVKILRGHAVVGEVGVMALAFHPTQPWVFSGGADGKVVLYQD 225
G G + + ++ VRWH KGDY S+ P AG +V+IHQ+S+G +Q PF K G+ QA FHP+KPF F+A+Q HVRVYHLVKQ ++K+L+SGC+WISSLDIH +GDH++V S DRR+VWFDLDLSS PYKTLKYH +AVRAV FH+ YPLMAS +DDG+VH+FH+ VY DLM+NPL+VPVKILRGH + GV+ LAFHPTQPW+F+ GADGK+ LYQD
Sbjct: 446 GFSGPISALRTKAEMSKVRWHVKGDYFVSISPKAGAPSVLIHQLSKGNSQQPFSKAKGEAQAACFHPNKPFLFVASQQHVRVYHLVKQAMVKRLISGCRWISSLDIHKSGDHLIVGSLDRRMVWFDLDLSSTPYKTLKYHERAVRAVQFHQRYPLMASASDDGSVHIFHSMVYSDLMRNPLIVPVKILRGHTIQNRHGVLTLAFHPTQPWIFTAGADGKIFLYQD 670
BLAST of EWM21191.1 vs. NCBI_GenBank
Match: gi|298714471|emb|CBJ27493.1| (Similar to novel protein similar to vertebrate block of proliferation 1 (BOP1) [Ectocarpus siliculosus]) HSP 1 Score: 324.324 bits (830), Expect = 1.538e-104 Identity = 151/228 (66.23%), Postives = 181/228 (79.39%), Query Frame = 0
Query: 1 GGDGLV---LGMEGGGSVTDVRWHGKGDYLASLVPTAGGKAVMIHQISRGKTQCPFKKTHGQVQAVAFHPHKPFFFLATQTHVRVYHLVKQVLMKKLLSGCKWISSLDIHPTGDHVLVSSYDRRVVWFDLDLSSLPYKTLKYHSKAVRAVAFHRSYPLMASGADDGTVHVFHATVYDDLMQNPLVVPVKILRGHAVVGEVGVMALAFHPTQPWVFSGGADGKVVLYQD 225
G DG V + + V V WHGKGDYLAS+ +AVMIHQ+S+ TQCPF+KT G+VQ V FH KPF F+AT+ VR+YHL+KQ+L+KKL+SGCKWIS +D+HP+GDH++V SYDRRV WFDLDL+S PYKTLKYH+KAVRA FHR YPLMAS +DDG+VHVFHATVY DL++NPLVVP+KILRGH V G +GVMAL FHP QPWVF+ GADG V L+QD
Sbjct: 414 GSDGEVGPRVVLRCEREVCCVTWHGKGDYLASVSRGEDRRAVMIHQVSKASTQCPFRKTKGEVQCVKFHVSKPFLFVATKQQVRIYHLIKQMLVKKLISGCKWISCIDVHPSGDHLIVGSYDRRVAWFDLDLASTPYKTLKYHTKAVRAAQFHRHYPLMASASDDGSVHVFHATVYSDLLRNPLVVPLKILRGHEVTGGLGVMALVFHPRQPWVFTAGADGAVRLFQD 641
BLAST of EWM21191.1 vs. NCBI_GenBank
Match: gi|813119637|ref|XP_012196330.1| (hypothetical protein SPRG_02364 [Saprolegnia parasitica CBS 223.65] >gi|641538842|gb|KDO32663.1| hypothetical protein SPRG_02364 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 327.791 bits (839), Expect = 1.635e-104 Identity = 151/224 (67.41%), Postives = 181/224 (80.80%), Query Frame = 0
Query: 2 GDGLVLGMEGGGSVTDVRWHGKGDYLASLVPTAGGKAVMIHQISRGKTQCPFKKTHGQVQAVAFHPHKPFFFLATQTHVRVYHLVKQVLMKKLLSGCKWISSLDIHPTGDHVLVSSYDRRVVWFDLDLSSLPYKTLKYHSKAVRAVAFHRSYPLMASGADDGTVHVFHATVYDDLMQNPLVVPVKILRGHAVVGEVGVMALAFHPTQPWVFSGGADGKVVLYQD 225
G G+ + + GG VTDV WH KGDYL+++VP+A +V+IHQIS+ +Q PF K G +Q VAFHP KPFFFLATQTHVRVY+LV+Q ++KKL SG KWISSL +HPTGDHVLV SYDRR+ WFDLDLSS PYKTLKYH KA RAV FH+ YPLMAS +DDGT+H+FHA VY DL++NPL+VP+KILRGH V G +GVM LAFHPT PW+ SGGAD + LYQ+
Sbjct: 552 GRGVRVVLHHGGLVTDVAWHYKGDYLSTVVPSADSSSVLIHQISKRSSQNPFTKKLGSIQTVAFHPSKPFFFLATQTHVRVYNLVQQAMVKKLSSGVKWISSLHVHPTGDHVLVGSYDRRLCWFDLDLSSTPYKTLKYHEKATRAVGFHKKYPLMASASDDGTIHIFHAMVYSDLIKNPLIVPLKILRGHEVTGGLGVMTLAFHPTLPWIASGGADNTIRLYQN 775
BLAST of EWM21191.1 vs. NCBI_GenBank
Match: gi|669157090|ref|XP_008614107.1| (hypothetical protein SDRG_09919 [Saprolegnia diclina VS20] >gi|530734364|gb|EQC32606.1| hypothetical protein SDRG_09919 [Saprolegnia diclina VS20]) HSP 1 Score: 327.405 bits (838), Expect = 3.863e-104 Identity = 151/224 (67.41%), Postives = 181/224 (80.80%), Query Frame = 0
Query: 2 GDGLVLGMEGGGSVTDVRWHGKGDYLASLVPTAGGKAVMIHQISRGKTQCPFKKTHGQVQAVAFHPHKPFFFLATQTHVRVYHLVKQVLMKKLLSGCKWISSLDIHPTGDHVLVSSYDRRVVWFDLDLSSLPYKTLKYHSKAVRAVAFHRSYPLMASGADDGTVHVFHATVYDDLMQNPLVVPVKILRGHAVVGEVGVMALAFHPTQPWVFSGGADGKVVLYQD 225
G G+ + + GG VTDV WH KGDYL+++VP+A +V+IHQIS+ +Q PF K G +Q VAFHP KPFFFLATQTHVRVY+LV+Q ++KKL SG KWISSL +HPTGDHVLV SYDRR+ WFDLDLSS PYKTLKYH KA RAV FH+ YPLMAS +DDGT+H+FHA VY DL++NPL+VP+KILRGH V G +GVM LAFHPT PW+ SGGAD + LYQ+
Sbjct: 568 GRGVRVVLHHGGLVTDVAWHYKGDYLSTVVPSADSSSVLIHQISKRSSQNPFTKKLGSIQTVAFHPSKPFFFLATQTHVRVYNLVQQAMVKKLSSGVKWISSLHVHPTGDHVLVGSYDRRLCWFDLDLSSTPYKTLKYHEKATRAVGFHKKYPLMASASDDGTIHIFHAMVYSDLIKNPLIVPLKILRGHEVTGGLGVMTLAFHPTLPWIASGGADNTIRLYQN 791 The following BLAST results are available for this feature:
BLAST of EWM21191.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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