EWM21195.1, cds9478 (CDS) Nannochloropsis gaditana

Overview
NameEWM21195.1
Unique Namecds9478
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:23050..23328 -

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Properties
Property NameValue
Protein idEWM21195.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100474g1.5245.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:23050..23328 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005654nucleoplasm
GO:0005730nucleolus
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
[Close]
BLAST of EWM21195.1 vs. NCBI_GenBank
Match: gi|585101279|gb|EWM21195.1| (hypothetical protein Naga_100474g1 [Nannochloropsis gaditana])

HSP 1 Score: 182.185 bits (461), Expect = 3.878e-58
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 
Query:    1 MWHGSGHMGLLLLLVSCATAFLLPAAPSPRAISSSTKNPIARFASSIDEAPSLVERQEPQPQAQQEPPPRGNARRPLSPKPAGPWVLLEGEL 92
            MWHGSGHMGLLLLLVSCATAFLLPAAPSPRAISSSTKNPIARFASSIDEAPSLVERQEPQPQAQQEPPPRGNARRPLSPKPAGPWVLLEGEL
Sbjct:    1 MWHGSGHMGLLLLLVSCATAFLLPAAPSPRAISSSTKNPIARFASSIDEAPSLVERQEPQPQAQQEPPPRGNARRPLSPKPAGPWVLLEGEL 92
[Close]
BLAST of EWM21195.1 vs. NCBI_GenBank
Match: gi|553188524|ref|XP_005854814.1| (block of proliferation 1 [Nannochloropsis gaditana CCMP526] >gi|422294250|gb|EKU21550.1| block of proliferation 1 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 170.629 bits (431), Expect = 2.536e-47
Identity = 85/87 (97.70%), Postives = 85/87 (97.70%), Query Frame = 0 
Query:    1 MWHGSGHMGLLLLLVSCATAFLLPAAPSPRAISSSTKNPIARFASSIDEAPSLVERQEPQPQAQQEPPPRGNARRPLSPKPAGPWVL 87
            MWHGSGHMGLLLLLVSCATAFLLPAAPSPRAISSSTKNPIARFASSIDEAPSLVE QEPQPQAQQEPPPRGNARRPLSPKPAGPW L
Sbjct:    1 MWHGSGHMGLLLLLVSCATAFLLPAAPSPRAISSSTKNPIARFASSIDEAPSLVEPQEPQPQAQQEPPPRGNARRPLSPKPAGPWGL 87
The following BLAST results are available for this feature:
BLAST of EWM21195.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585101279|gb|EWM21195.1|3.878e-58100.00hypothetical protein Naga_100474g1 [Nannochloropsi... [more]
gi|553188524|ref|XP_005854814.1|2.536e-4797.70block of proliferation 1 [Nannochloropsis gaditana... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9509rna9509Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications