EWM21198.1, cds9475 (CDS) Nannochloropsis gaditana

Overview
NameEWM21198.1
Unique Namecds9475
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:18857..19825 -

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Properties
Property NameValue
Protein idEWM21198.1
ProductSmr MutS2 protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101931g1.4408.mrna
GbkeyCDS
End range.
End range19825
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:18857..19825 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR002625Smr/MutS2_C
Homology
[Close]
BLAST of EWM21198.1 vs. NCBI_GenBank
Match: gi|585101285|gb|EWM21198.1| (Smr MutS2 protein, partial [Nannochloropsis gaditana])

HSP 1 Score: 635.95 bits (1639), Expect = 0.000e+0
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0 
Query:    1 PPRREAAQALFDRAVGQGLCPSLEMYGALVDVYAKEGDVPGACRVFREALGHLQREGRKEGGREGGREGGKDNPFSYLYTSLIHAFNTAPTPLSPPPSPGSSPPSSPLPSSSEGEAPLPSSSEGEAPWPAALYLFEEYQLGVRGNRTTIPLLTAVARSLDAALPPSRPRAPPPFPLPTAILHVLYRRHAPLTPLRSHWSYRYPSSLDLHLLTRPLAQAAVHTALEEIRQGEVTLAPEGLQIIVGKSSQVVRGGVKEALGEECRPPLEVEEVGGNDGRLLVSLASVNAWLARQGEGEGGGDGKAGGRKEAKVNPAYTLETPRG 322
            PPRREAAQALFDRAVGQGLCPSLEMYGALVDVYAKEGDVPGACRVFREALGHLQREGRKEGGREGGREGGKDNPFSYLYTSLIHAFNTAPTPLSPPPSPGSSPPSSPLPSSSEGEAPLPSSSEGEAPWPAALYLFEEYQLGVRGNRTTIPLLTAVARSLDAALPPSRPRAPPPFPLPTAILHVLYRRHAPLTPLRSHWSYRYPSSLDLHLLTRPLAQAAVHTALEEIRQGEVTLAPEGLQIIVGKSSQVVRGGVKEALGEECRPPLEVEEVGGNDGRLLVSLASVNAWLARQGEGEGGGDGKAGGRKEAKVNPAYTLETPRG
Sbjct:    1 PPRREAAQALFDRAVGQGLCPSLEMYGALVDVYAKEGDVPGACRVFREALGHLQREGRKEGGREGGREGGKDNPFSYLYTSLIHAFNTAPTPLSPPPSPGSSPPSSPLPSSSEGEAPLPSSSEGEAPWPAALYLFEEYQLGVRGNRTTIPLLTAVARSLDAALPPSRPRAPPPFPLPTAILHVLYRRHAPLTPLRSHWSYRYPSSLDLHLLTRPLAQAAVHTALEEIRQGEVTLAPEGLQIIVGKSSQVVRGGVKEALGEECRPPLEVEEVGGNDGRLLVSLASVNAWLARQGEGEGGGDGKAGGRKEAKVNPAYTLETPRG 322
The following BLAST results are available for this feature:
BLAST of EWM21198.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101285|gb|EWM21198.1|0.000e+0100.00Smr MutS2 protein, partial [Nannochloropsis gadita... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9506rna9506Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications