EWM29731.1, cds944 (CDS) Nannochloropsis gaditana

Overview
NameEWM29731.1
Unique Namecds944
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:791376..791545 +
Alignment locationCM002456.1:791590..791716 +
Alignment locationCM002456.1:791869..791988 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29731.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100022g60.830.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:791376..791545 +
CM002456.1supercontigCM002456.1:791590..791716 +
CM002456.1supercontigCM002456.1:791869..791988 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM29731.1 vs. NCBI_GenBank
Match: gi|585112311|gb|EWM29731.1| (hypothetical protein Naga_100022g60 [Nannochloropsis gaditana])

HSP 1 Score: 287.73 bits (735), Expect = 1.700e-98
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 
Query:    1 MSVARATSSSPEEVQCSFRTGISLQEAFRTTYHLPIYPDNNLLAELPYHCHLLSRCRIYCLSNNIIFVAGLSPSVHQRVNNCVCYLDWRELGEYCLKDLIVDQKGLCCRSARGPRFMPDTCLHPSQQRQISMGSPSRM 138
            MSVARATSSSPEEVQCSFRTGISLQEAFRTTYHLPIYPDNNLLAELPYHCHLLSRCRIYCLSNNIIFVAGLSPSVHQRVNNCVCYLDWRELGEYCLKDLIVDQKGLCCRSARGPRFMPDTCLHPSQQRQISMGSPSRM
Sbjct:    1 MSVARATSSSPEEVQCSFRTGISLQEAFRTTYHLPIYPDNNLLAELPYHCHLLSRCRIYCLSNNIIFVAGLSPSVHQRVNNCVCYLDWRELGEYCLKDLIVDQKGLCCRSARGPRFMPDTCLHPSQQRQISMGSPSRM 138
The following BLAST results are available for this feature:
BLAST of EWM29731.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112311|gb|EWM29731.1|1.700e-98100.00hypothetical protein Naga_100022g60 [Nannochlorops... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna944rna944Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications