EWM21236.1, cds9437 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21236.1 vs. NCBI_GenBank
Match: gi|585101356|gb|EWM21236.1| (alpha beta hydrolase, partial [Nannochloropsis gaditana]) HSP 1 Score: 499.59 bits (1285), Expect = 1.566e-178 Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0
Query: 1 MPELIGPDEKLPFMEGRGDVEEKKGKMTRRVEEAESLIGPLGEGRHRTLSAGRPSRPSAPAPPAQLPGIYHPLHMEPAGLSRKSQLLRQVWPSLRQYLCRRPSLSRLVVYSLITTATLIGGLLLSPYSASFRSMLPSNPFFPPSSGPSESSGDLPRVSLWPRGHVPLALGEEPPDTPSLIPFFPEPEDWRGTSMVVMPGGGYKFLSLFKEGVRVAKWLSEEEGIAAFVLQYRLGPDGYHHPVQLLDGRRSLKK 253
MPELIGPDEKLPFMEGRGDVEEKKGKMTRRVEEAESLIGPLGEGRHRTLSAGRPSRPSAPAPPAQLPGIYHPLHMEPAGLSRKSQLLRQVWPSLRQYLCRRPSLSRLVVYSLITTATLIGGLLLSPYSASFRSMLPSNPFFPPSSGPSESSGDLPRVSLWPRGHVPLALGEEPPDTPSLIPFFPEPEDWRGTSMVVMPGGGYKFLSLFKEGVRVAKWLSEEEGIAAFVLQYRLGPDGYHHPVQLLDGRRSLKK
Sbjct: 1 MPELIGPDEKLPFMEGRGDVEEKKGKMTRRVEEAESLIGPLGEGRHRTLSAGRPSRPSAPAPPAQLPGIYHPLHMEPAGLSRKSQLLRQVWPSLRQYLCRRPSLSRLVVYSLITTATLIGGLLLSPYSASFRSMLPSNPFFPPSSGPSESSGDLPRVSLWPRGHVPLALGEEPPDTPSLIPFFPEPEDWRGTSMVVMPGGGYKFLSLFKEGVRVAKWLSEEEGIAAFVLQYRLGPDGYHHPVQLLDGRRSLKK 253
BLAST of EWM21236.1 vs. NCBI_GenBank
Match: gi|553195709|ref|XP_005856188.1| (alpha beta hydrolase, partial [Nannochloropsis gaditana CCMP526] >gi|422292866|gb|EKU20168.1| alpha beta hydrolase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 400.593 bits (1028), Expect = 4.419e-140 Identity = 204/207 (98.55%), Postives = 206/207 (99.52%), Query Frame = 0
Query: 1 MPELIGPDEKLPFMEGRGDVEEKKGKMTRRVEEAESLIGPLGEGRHRTLSAGRPSRPSAPAPPAQLPGIYHPLHMEPAGLSRKSQLLRQVWPSLRQYLCRRPSLSRLVVYSLITTATLIGGLLLSPYSASFRSMLPSNPFFPPSSGPSESSGDLPRVSLWPRGHVPLALGEEPPDTPSLIPFFPEPEDWRGTSMVVMPGGGYKFLSL 207
MPELIGPDEKLPF+EGRG+V EKKGKMTRRVEEAESLIGPLGEGRHRTLSAGRPSRPSAPAPPAQLPGIYHPLHMEPAGLSRKSQLLRQVWPSLRQYLCRRPSLSRLVVYSLITTATLIGGLLLSPYSASFRSMLPSNPFFPPSSGPSESSGDLPRVSLWPRGHVPLALGEEPPDTPSLIPFFPEPEDWRGTSMVVMPGGGYKFLSL
Sbjct: 1 MPELIGPDEKLPFVEGRGNVGEKKGKMTRRVEEAESLIGPLGEGRHRTLSAGRPSRPSAPAPPAQLPGIYHPLHMEPAGLSRKSQLLRQVWPSLRQYLCRRPSLSRLVVYSLITTATLIGGLLLSPYSASFRSMLPSNPFFPPSSGPSESSGDLPRVSLWPRGHVPLALGEEPPDTPSLIPFFPEPEDWRGTSMVVMPGGGYKFLSL 207
BLAST of EWM21236.1 vs. NCBI_GenBank
Match: gi|522207265|ref|WP_020714732.1| (alpha/beta hydrolase [Acidobacteriaceae bacterium KBS 89]) HSP 1 Score: 100.138 bits (248), Expect = 2.252e-21 Identity = 52/94 (55.32%), Postives = 66/94 (70.21%), Query Frame = 0
Query: 159 LWPRGHVPLALGEEPPDTPSLIPFFPEPEDWRGTSMVVMPGGGYKFLSLFKEGVRVAKWLSEEEGIAAFVLQYRLGPDGYHHPVQLLDGRRSLK 252
LWP G P ALG+E D P+L F P + T +VV PGGGY+ LS+ KEG VA+WL+ E G+AAFVLQYRLGP YHHPV+L D +R+++
Sbjct: 40 LWPSG-APGALGDEDIDKPTLTVFLPVAANATKTGVVVAPGGGYQHLSMDKEGFAVARWLN-ERGVAAFVLQYRLGPK-YHHPVELEDAQRAIR 130
BLAST of EWM21236.1 vs. NCBI_GenBank
Match: gi|651255492|ref|WP_026389091.1| (1,4-beta-xylanase [Acidobacteria bacterium KBS 146]) HSP 1 Score: 93.5893 bits (231), Expect = 5.400e-19 Identity = 51/106 (48.11%), Postives = 71/106 (66.98%), Query Frame = 0
Query: 147 PSESSGDLPRVSLWPRGHVPLALGEEPPDTPSLIPFFPEPEDWRGTSMVVMPGGGYKFLSLFKEGVRVAKWLSEEEGIAAFVLQYRLGPDGYHHPVQLLDGRRSLK 252
P++SSG+ V LWP G P ALG + D P + F P + T +VV PGGGY+ L++ KEG +A WL+ + G+AAFVL+YRLGP YHHPV+L D +R+++
Sbjct: 23 PAQSSGN--EVLLWPAG-APGALGSDDTDKPEITVFLPTAPNPTKTGVVVAPGGGYQHLAIDKEGFAIAHWLN-DHGVAAFVLRYRLGPR-YHHPVELGDAQRAIR 123
BLAST of EWM21236.1 vs. NCBI_GenBank
Match: gi|494658836|ref|WP_007416780.1| (alpha/beta hydrolase [Pedosphaera parvula] >gi|223892728|gb|EEF59198.1| alpha/beta hydrolase [bacterium Ellin514]) HSP 1 Score: 91.6633 bits (226), Expect = 3.328e-18 Identity = 48/94 (51.06%), Postives = 62/94 (65.96%), Query Frame = 0
Query: 159 LWPRGHVPLALGEEPPDTPSLIPFFPEPEDWRGTSMVVMPGGGYKFLSLFKEGVRVAKWLSEEEGIAAFVLQYRLGPDGYHHPVQLLDGRRSLK 252
LW G P ALG D P+L PFFP P+ G +MVV PGGGY L+ + EG A WL +++G+ AFVL+YRLG GYHHPV+L D R+++
Sbjct: 27 LWEDG-APGALGTADKDIPTLTPFFPSPDKATGAAMVVCPGGGYGNLAPY-EGKDYALWL-KDQGVTAFVLKYRLGSAGYHHPVELQDVSRAIR 117
BLAST of EWM21236.1 vs. NCBI_GenBank
Match: gi|1120195682|ref|WP_073063441.1| (alpha/beta hydrolase [Aliifodinibius roseus] >gi|1110338803|emb|SHF48924.1| Acetyl esterase/lipase [Aliifodinibius roseus]) HSP 1 Score: 90.1225 bits (222), Expect = 1.581e-17 Identity = 53/119 (44.54%), Postives = 71/119 (59.66%), Query Frame = 0
Query: 134 MLPSNPFFPPSSGPSESSGDLPRVSLWPRGHVPLALGEEPPDTPSLIPFFPEPEDWRGTSMVVMPGGGYKFLSLFKEGVRVAKWLSEEEGIAAFVLQYRLGPDGYHHPVQLLDGRRSLK 252
MLP + F ES D +SLWP G P A G+ DTP+L + PE T +V+ PGGGY L++ EG +VA+WL+ GIAAFV++YRLG YHHP QL D +R+++
Sbjct: 21 MLPQHEAFAQEK---ESRIDSLTLSLWPEG-APEAQGDSDLDTPTLTVYLPEKAATSQTGVVIFPGGGYAHLAMDHEGRQVAEWLN-SLGIAAFVVKYRLGTR-YHHPSQLKDAQRAIR 133
BLAST of EWM21236.1 vs. NCBI_GenBank
Match: gi|1113276631|gb|OJV41788.1| (1,4-beta-xylanase [Acidobacteriales bacterium 59-55]) HSP 1 Score: 89.3521 bits (220), Expect = 2.595e-17 Identity = 46/96 (47.92%), Postives = 65/96 (67.71%), Query Frame = 0
Query: 157 VSLWPRGHVPLALGEEPPDTPSLIPFFPEPEDWRGTSMVVMPGGGYKFLSLFKEGVRVAKWLSEEEGIAAFVLQYRLGPDGYHHPVQLLDGRRSLK 252
V LWP G P A G++ D P+L + P + T +VV PGGGY+ LS+ KEG VA WL+ + G+AAFVL+YRLGP YH+P++L D +R+++
Sbjct: 38 VLLWPNG-APGAKGDQDVDKPTLTIYLPSGANATKTGVVVAPGGGYEHLSMTKEGSDVAHWLN-QRGVAAFVLKYRLGPT-YHNPIELGDAQRAMR 130
BLAST of EWM21236.1 vs. NCBI_GenBank
Match: gi|551213561|ref|WP_022841503.1| (endo-1,4-beta-xylanase [Acidobacteriaceae bacterium TAA166]) HSP 1 Score: 88.1965 bits (217), Expect = 5.096e-17 Identity = 53/110 (48.18%), Postives = 69/110 (62.73%), Query Frame = 0
Query: 143 PSSGPSESSGDLPRVSLWPRGHVPLALGEEPPDTPSLIPFFPEPEDWRGTSMVVMPGGGYKFLSLFKEGVRVAKWLSEEEGIAAFVLQYRLGPDGYHHPVQLLDGRRSLK 252
P+ PS+ P V LWP G P A G E D P L F P + T +VV PGGGY+ LS+ KEG VA+WL+ + G+AAFVL+YRLGP Y +PVQL D +R+++
Sbjct: 19 PAQQPSQ-----PEVLLWPSG-APGAQGTEDVDKPELTVFLPTGPNATRTGVVVAPGGGYEHLSMDKEGFAVARWLN-DHGVAAFVLRYRLGPR-YRYPVQLGDAQRAIR 120
BLAST of EWM21236.1 vs. NCBI_GenBank
Match: gi|500002225|ref|WP_011682943.1| (alpha/beta hydrolase [Candidatus Solibacter usitatus] >gi|116223458|gb|ABJ82167.1| alpha/beta hydrolase [Candidatus Solibacter usitatus Ellin6076]) HSP 1 Score: 87.8113 bits (216), Expect = 8.513e-17 Identity = 46/94 (48.94%), Postives = 64/94 (68.09%), Query Frame = 0
Query: 159 LWPRGHVPLALGEEPPDTPSLIPFFPEPEDWRGTSMVVMPGGGYKFLSLFKEGVRVAKWLSEEEGIAAFVLQYRLGPDGYHHPVQLLDGRRSLK 252
LW +G P ALG + D P+L P+ GT+++V PGGGY LS+ KEG ++AKWL+ G+ AFVL+YRLGP YHHPV+L D +R+++
Sbjct: 29 LWAQG-APGALGSDEIDKPTLAPYVVPTGRGTGTAVIVFPGGGYSGLSMDKEGDQIAKWLN-SLGVTAFVLKYRLGPK-YHHPVELGDAQRAIR 119
BLAST of EWM21236.1 vs. NCBI_GenBank
Match: gi|1087422459|emb|SDL43416.1| (Acetyl esterase/lipase [Catalinimonas alkaloidigena]) HSP 1 Score: 87.8113 bits (216), Expect = 9.214e-17 Identity = 48/99 (48.48%), Postives = 62/99 (62.63%), Query Frame = 0
Query: 157 VSLWPRGHVPLALGEEPPDTPSLIPFFPEPEDWRGTSMVVMPGGGYKFLSLFKEGVRVAKWLSEEEGIAAFVLQYRLGPD---GYHHPVQLLDGRRSLK 252
V LWP G P A G E D P+L F P + G ++VV PGGGY L++ KEG VA+WL+ G+AAFVL+YRLG D GY HP L D +R+++
Sbjct: 33 VMLWPDG-APGAKGYEAKDQPNLTVFLPPADRATGAAVVVCPGGGYHHLAMEKEGFHVAEWLN-SLGVAAFVLKYRLGSDEAGGYRHPAMLQDAQRAIR 129 The following BLAST results are available for this feature:
BLAST of EWM21236.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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