EWM21238.1, cds9435 (CDS) Nannochloropsis gaditana

Overview
NameEWM21238.1
Unique Namecds9435
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:354618..355055 +

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Properties
Property NameValue
Start range354618
Start range.
Protein idEWM21238.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101775g1.9842.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:354618..355055 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21238.1 vs. NCBI_GenBank
Match: gi|585101361|gb|EWM21238.1| (hypothetical protein Naga_101775g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 266.544 bits (680), Expect = 6.036e-90
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0 
Query:    1 GGRAGPQARRWVGRRTALSFSPREVDARSLILSLHPLPLSPPLPLPRKPRLLLCLPHGPGPSPCLLLPNPLQLRPHGPSPRRGRACPGCVPPFPPGPGEGPLCPTAFPLDCGSSLRDRRGGGGRELGGGVRAGARVALRGIRWIC 145
            GGRAGPQARRWVGRRTALSFSPREVDARSLILSLHPLPLSPPLPLPRKPRLLLCLPHGPGPSPCLLLPNPLQLRPHGPSPRRGRACPGCVPPFPPGPGEGPLCPTAFPLDCGSSLRDRRGGGGRELGGGVRAGARVALRGIRWIC
Sbjct:    1 GGRAGPQARRWVGRRTALSFSPREVDARSLILSLHPLPLSPPLPLPRKPRLLLCLPHGPGPSPCLLLPNPLQLRPHGPSPRRGRACPGCVPPFPPGPGEGPLCPTAFPLDCGSSLRDRRGGGGRELGGGVRAGARVALRGIRWIC 145
The following BLAST results are available for this feature:
BLAST of EWM21238.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101361|gb|EWM21238.1|6.036e-90100.00hypothetical protein Naga_101775g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9466rna9466Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications