EWM21245.1, cds9428 (CDS) Nannochloropsis gaditana

Overview
NameEWM21245.1
Unique Namecds9428
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:341893..342174 +
Alignment locationKK037253.1:342283..342516 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21245.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100910g2.5856.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:341893..342174 +
KK037253.1supercontigKK037253.1:342283..342516 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM21245.1 vs. NCBI_GenBank
Match: gi|585101375|gb|EWM21245.1| (hypothetical protein Naga_100910g2 [Nannochloropsis gaditana])

HSP 1 Score: 343.969 bits (881), Expect = 1.228e-119
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0 
Query:    1 MPFTMAKPLSATPLSSSFDPPFLRKRILTPNDPPVRSKLFPEKTGRGGGREGGQGRGRRSPLPWFLIGLEGRSPTHTALLGSRKSMKEDEVNEGTTHPLVAVDINPNRSCRAPRHVKPWPGAEAESPLPAGCDAFCSPPFTHETVSGIGGRGEGACSPKDILVPCAAWLCP 171
            MPFTMAKPLSATPLSSSFDPPFLRKRILTPNDPPVRSKLFPEKTGRGGGREGGQGRGRRSPLPWFLIGLEGRSPTHTALLGSRKSMKEDEVNEGTTHPLVAVDINPNRSCRAPRHVKPWPGAEAESPLPAGCDAFCSPPFTHETVSGIGGRGEGACSPKDILVPCAAWLCP
Sbjct:    1 MPFTMAKPLSATPLSSSFDPPFLRKRILTPNDPPVRSKLFPEKTGRGGGREGGQGRGRRSPLPWFLIGLEGRSPTHTALLGSRKSMKEDEVNEGTTHPLVAVDINPNRSCRAPRHVKPWPGAEAESPLPAGCDAFCSPPFTHETVSGIGGRGEGACSPKDILVPCAAWLCP 171
The following BLAST results are available for this feature:
BLAST of EWM21245.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101375|gb|EWM21245.1|1.228e-119100.00hypothetical protein Naga_100910g2 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9459rna9459Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications