EWM21255.1, cds9418 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21255.1 vs. NCBI_GenBank
Match: gi|585101391|gb|EWM21255.1| (slt family, partial [Nannochloropsis gaditana]) HSP 1 Score: 409.838 bits (1052), Expect = 5.552e-145 Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0
Query: 1 MATEFRLQDISNIQATTPPRRDIQQRTKRMLKLLAPGKLKIAAFPNFYPICYDTSQNMGDRHPSPAGTISEAKLDEYNPDSTQGHFAGLEVELLLRFCKEYGLEPEIIAVQDFDNLWTYPVKQKADVCIGGITVAPNRTHPGLAWSEAYYKVSRTVIYHRRRPPRPGMGFPQAMEGVVRGVPGSTGFKDAKRRLC 195
MATEFRLQDISNIQATTPPRRDIQQRTKRMLKLLAPGKLKIAAFPNFYPICYDTSQNMGDRHPSPAGTISEAKLDEYNPDSTQGHFAGLEVELLLRFCKEYGLEPEIIAVQDFDNLWTYPVKQKADVCIGGITVAPNRTHPGLAWSEAYYKVSRTVIYHRRRPPRPGMGFPQAMEGVVRGVPGSTGFKDAKRRLC
Sbjct: 1 MATEFRLQDISNIQATTPPRRDIQQRTKRMLKLLAPGKLKIAAFPNFYPICYDTSQNMGDRHPSPAGTISEAKLDEYNPDSTQGHFAGLEVELLLRFCKEYGLEPEIIAVQDFDNLWTYPVKQKADVCIGGITVAPNRTHPGLAWSEAYYKVSRTVIYHRRRPPRPGMGFPQAMEGVVRGVPGSTGFKDAKRRLC 195
BLAST of EWM21255.1 vs. NCBI_GenBank
Match: gi|1125753621|ref|WP_075081291.1| (hypothetical protein [Terrimicrobium sacchariphilum] >gi|1012436684|dbj|GAT35487.1| ABC-type amino acid transport substrate-binding protein [Terrimicrobium sacchariphilum]) HSP 1 Score: 61.6178 bits (148), Expect = 2.663e-8 Identity = 43/135 (31.85%), Postives = 61/135 (45.19%), Query Frame = 0
Query: 23 IQQRTKRMLKLLAPGKLKIAAFPNFYPICYDTSQNMGDRHPSPAGTISEAKLDEYNPDSTQGHFAGLEVELLLRFCKEYGLEPEIIAVQDFDNLWTYPVKQKADVCIGGITVAPNRTHPGLAWSEAYYKVSRTVI 157
+Q T L L+ G+L+IAAFP F P + GDR Y G ++ L F +GLEP ++ DF LW P +Q ADV GI++ P + G+ WS Y +V RT++
Sbjct: 1 MQFFTHTSLSTLSSGRLRIAAFPGFAPFSW----REGDR--------------AY----------GRDIAFLTLFASLHGLEP-VVEFHDFYRLWELPGRQAADVAASGISMRPA-CNDGVTWSRPYSEVRRTLL 105 The following BLAST results are available for this feature:
BLAST of EWM21255.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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