EWM21259.1, cds9414 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21259.1 vs. NCBI_GenBank
Match: gi|585101401|gb|EWM21259.1| (hypothetical protein Naga_102772g1 [Nannochloropsis gaditana]) HSP 1 Score: 154.836 bits (390), Expect = 1.060e-47 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
Query: 1 MTQNQLAKERRELRQAQVSSLIDQIPKDFNKSWIDPHQSGRQSVQTGVERTGTPRPPSPPPSPPAPFLPLPVSVPPYP 78
MTQNQLAKERRELRQAQVSSLIDQIPKDFNKSWIDPHQSGRQSVQTGVERTGTPRPPSPPPSPPAPFLPLPVSVPPYP
Sbjct: 1 MTQNQLAKERRELRQAQVSSLIDQIPKDFNKSWIDPHQSGRQSVQTGVERTGTPRPPSPPPSPPAPFLPLPVSVPPYP 78
BLAST of EWM21259.1 vs. NCBI_GenBank
Match: gi|695383774|ref|XP_009517810.1| (hypothetical protein PHYSODRAFT_553525 [Phytophthora sojae] >gi|348690721|gb|EGZ30535.1| hypothetical protein PHYSODRAFT_553525 [Phytophthora sojae]) HSP 1 Score: 55.0694 bits (131), Expect = 4.578e-7 Identity = 25/36 (69.44%), Postives = 28/36 (77.78%), Query Frame = 0
Query: 1 MTQNQLAKERRELRQAQVSSLIDQIPKDFNKSWIDP 36
MTQ+ LAKERRELRQ Q + LID IPKD N+ W DP
Sbjct: 422 MTQSNLAKERRELRQTQANQLIDSIPKDLNRPWEDP 457
BLAST of EWM21259.1 vs. NCBI_GenBank
Match: gi|570315290|gb|ETO63238.1| (ATP-dependent helicase HrpA [Phytophthora parasitica P1976]) HSP 1 Score: 55.0694 bits (131), Expect = 4.670e-7 Identity = 25/36 (69.44%), Postives = 28/36 (77.78%), Query Frame = 0
Query: 1 MTQNQLAKERRELRQAQVSSLIDQIPKDFNKSWIDP 36
MTQ+ LAKERRELRQ Q + LID IPKD N+ W DP
Sbjct: 442 MTQSNLAKERRELRQTQANQLIDSIPKDLNRPWEDP 477
BLAST of EWM21259.1 vs. NCBI_GenBank
Match: gi|970651007|gb|KUF89910.1| (pre-mRNA-splicing factor ATP-dependent RNA [Phytophthora nicotianae]) HSP 1 Score: 55.0694 bits (131), Expect = 4.716e-7 Identity = 25/36 (69.44%), Postives = 28/36 (77.78%), Query Frame = 0
Query: 1 MTQNQLAKERRELRQAQVSSLIDQIPKDFNKSWIDP 36
MTQ+ LAKERRELRQ Q + LID IPKD N+ W DP
Sbjct: 442 MTQSNLAKERRELRQTQANQLIDSIPKDLNRPWEDP 477
BLAST of EWM21259.1 vs. NCBI_GenBank
Match: gi|675176173|ref|XP_008896971.1| (ATP-dependent helicase HrpA [Phytophthora parasitica INRA-310] >gi|568102734|gb|ETN17405.1| ATP-dependent helicase HrpA [Phytophthora parasitica INRA-310]) HSP 1 Score: 55.0694 bits (131), Expect = 4.762e-7 Identity = 25/36 (69.44%), Postives = 28/36 (77.78%), Query Frame = 0
Query: 1 MTQNQLAKERRELRQAQVSSLIDQIPKDFNKSWIDP 36
MTQ+ LAKERRELRQ Q + LID IPKD N+ W DP
Sbjct: 442 MTQSNLAKERRELRQTQANQLIDSIPKDLNRPWEDP 477
BLAST of EWM21259.1 vs. NCBI_GenBank
Match: gi|568037007|gb|ETM34605.1| (ATP-dependent helicase HrpA [Phytophthora parasitica]) HSP 1 Score: 55.0694 bits (131), Expect = 4.762e-7 Identity = 25/36 (69.44%), Postives = 28/36 (77.78%), Query Frame = 0
Query: 1 MTQNQLAKERRELRQAQVSSLIDQIPKDFNKSWIDP 36
MTQ+ LAKERRELRQ Q + LID IPKD N+ W DP
Sbjct: 442 MTQSNLAKERRELRQTQANQLIDSIPKDLNRPWEDP 477
BLAST of EWM21259.1 vs. NCBI_GenBank
Match: gi|567977664|gb|ETL28161.1| (ATP-dependent helicase HrpA [Phytophthora parasitica] >gi|568007155|gb|ETL81400.1| ATP-dependent helicase HrpA [Phytophthora parasitica]) HSP 1 Score: 55.0694 bits (131), Expect = 4.762e-7 Identity = 25/36 (69.44%), Postives = 28/36 (77.78%), Query Frame = 0
Query: 1 MTQNQLAKERRELRQAQVSSLIDQIPKDFNKSWIDP 36
MTQ+ LAKERRELRQ Q + LID IPKD N+ W DP
Sbjct: 442 MTQSNLAKERRELRQTQANQLIDSIPKDLNRPWEDP 477
BLAST of EWM21259.1 vs. NCBI_GenBank
Match: gi|566011459|gb|ETI34370.1| (ATP-dependent helicase HrpA [Phytophthora parasitica P1569]) HSP 1 Score: 55.0694 bits (131), Expect = 4.762e-7 Identity = 25/36 (69.44%), Postives = 28/36 (77.78%), Query Frame = 0
Query: 1 MTQNQLAKERRELRQAQVSSLIDQIPKDFNKSWIDP 36
MTQ+ LAKERRELRQ Q + LID IPKD N+ W DP
Sbjct: 442 MTQSNLAKERRELRQTQANQLIDSIPKDLNRPWEDP 477
BLAST of EWM21259.1 vs. NCBI_GenBank
Match: gi|676378435|ref|XP_009032496.1| (hypothetical protein AURANDRAFT_19250 [Aureococcus anophagefferens] >gi|323456999|gb|EGB12865.1| hypothetical protein AURANDRAFT_19250 [Aureococcus anophagefferens]) HSP 1 Score: 55.0694 bits (131), Expect = 4.844e-7 Identity = 24/36 (66.67%), Postives = 29/36 (80.56%), Query Frame = 0
Query: 1 MTQNQLAKERRELRQAQVSSLIDQIPKDFNKSWIDP 36
+TQ LAKERREL+QAQ ++LID IPKD N+ W DP
Sbjct: 333 LTQGALAKERRELKQAQANALIDGIPKDLNRPWEDP 368
BLAST of EWM21259.1 vs. NCBI_GenBank
Match: gi|1214706841|gb|OWZ18325.1| (ATP-dependent helicase [Phytophthora megakarya]) HSP 1 Score: 55.0694 bits (131), Expect = 4.902e-7 Identity = 25/36 (69.44%), Postives = 28/36 (77.78%), Query Frame = 0
Query: 1 MTQNQLAKERRELRQAQVSSLIDQIPKDFNKSWIDP 36
MTQ+ LAKERRELRQ Q + LID IPKD N+ W DP
Sbjct: 425 MTQSNLAKERRELRQTQANQLIDSIPKDLNRPWEDP 460 The following BLAST results are available for this feature:
BLAST of EWM21259.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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