EWM21262.1, cds9411 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21262.1 vs. NCBI_GenBank
Match: gi|585101414|gb|EWM21262.1| (meiotically up-regulated, partial [Nannochloropsis gaditana]) HSP 1 Score: 634.024 bits (1634), Expect = 0.000e+0 Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0
Query: 1 MKGGTSKSTYLRVSFFSLTKLKFRTPQVCGLVRRHAYSLLHVHPYANAFNFNDSNLSHGHHDDQVHPPMSAGVWEAKYEVDSLAAFLRLSRSYYQHTHDLACFQYPDSPSLPPSASSPPSSSPSSSLWLGAVRLVLDTLQAQQAGTLEHLPSVPPSFPPSLPPSFPYTFQRETRVASETQWGAAGEGGASRRCALVRSAFRPSDDATLLPFHLPGNAMLSVELKEVGKMLEEGGEEGWGEGGGEVGRRCLAMGEEIGRAVEEEGVVWVKRREGGRGGKEEAEGGGCGMEGMESVYAYEVRGQGEGGREGGR 311
MKGGTSKSTYLRVSFFSLTKLKFRTPQVCGLVRRHAYSLLHVHPYANAFNFNDSNLSHGHHDDQVHPPMSAGVWEAKYEVDSLAAFLRLSRSYYQHTHDLACFQYPDSPSLPPSASSPPSSSPSSSLWLGAVRLVLDTLQAQQAGTLEHLPSVPPSFPPSLPPSFPYTFQRETRVASETQWGAAGEGGASRRCALVRSAFRPSDDATLLPFHLPGNAMLSVELKEVGKMLEEGGEEGWGEGGGEVGRRCLAMGEEIGRAVEEEGVVWVKRREGGRGGKEEAEGGGCGMEGMESVYAYEVRGQGEGGREGGR
Sbjct: 1 MKGGTSKSTYLRVSFFSLTKLKFRTPQVCGLVRRHAYSLLHVHPYANAFNFNDSNLSHGHHDDQVHPPMSAGVWEAKYEVDSLAAFLRLSRSYYQHTHDLACFQYPDSPSLPPSASSPPSSSPSSSLWLGAVRLVLDTLQAQQAGTLEHLPSVPPSFPPSLPPSFPYTFQRETRVASETQWGAAGEGGASRRCALVRSAFRPSDDATLLPFHLPGNAMLSVELKEVGKMLEEGGEEGWGEGGGEVGRRCLAMGEEIGRAVEEEGVVWVKRREGGRGGKEEAEGGGCGMEGMESVYAYEVRGQGEGGREGGR 311
BLAST of EWM21262.1 vs. NCBI_GenBank
Match: gi|1129164057|gb|OLP76555.1| (Meiotically up-regulated gene 157 protein [Symbiodinium microadriaticum]) HSP 1 Score: 135.961 bits (341), Expect = 6.990e-33 Identity = 93/231 (40.26%), Postives = 122/231 (52.81%), Query Frame = 0
Query: 30 GLVRRHAYSLLHVHPYANAFNFNDSNLSHGHHDDQVHPPMSAGVWEAKYEVDSLAAFLRLSRSYYQHTHDLACFQYPDSPSLPPSASSPPSSSPSSSLWLGAVRLVLDTLQAQQAGTLEHLPSVPPSFPPSLPPSFPYTFQRETRVASETQWGAAGEGGASRRCALVRSAFRPSDDATLLPFHLPGNAMLSVELKEVGKMLEEGGEEGWGEGGGEVGRRCLAMGEEIGRAV 260
GLVRRH S+L + +ANAFNF+ S S D + HP M+ ++E KYE+DSLAAFL+LSRSY+Q++++ A F W AV+ V+ T+Q Q G E+ + PY FQR+T ++T G G C L RS FRPSDDATLLPF +P NAM +VELK VG M E G E G +G ++ EE+ AV
Sbjct: 119 GLVRRHTKSVL-LDSFANAFNFDSSKPSPWVSDIR-HPNMTNAIYEGKYEMDSLAAFLKLSRSYWQNSNNSAIFD---------------------ERWQRAVKKVISTIQVMQKGIDEY------------SSNLPYKFQRDTYAPTDTLI-LQGLGPPGASCGLSRSPFRPSDDATLLPFLVPANAMAAVELKHVGLMCREIGCE--DTLTGSLG----SLAEELSSAV 307
BLAST of EWM21262.1 vs. NCBI_GenBank
Match: gi|857973673|emb|CEP00144.1| (hypothetical protein PBRA_007878 [Plasmodiophora brassicae]) HSP 1 Score: 126.716 bits (317), Expect = 3.556e-29 Identity = 80/240 (33.33%), Postives = 117/240 (48.75%), Query Frame = 0
Query: 27 QVCGLVRRHAYSLLHVHPYANAFNFNDSNLSHGHHDDQVHPPMSAGVWEAKYEVDSLAAFLRLSRSYYQHTHDLACFQYPDSPSLPPSASSPPSSSPSSSLWLGAVRLVLDTLQAQQAGTLEHLPSVPPSFPPSLPPSFPYTFQRETRVASETQWGAAGEGGASRRCALVRSAFRPSDDATLLPFHLPGNAMLSVELKEVGKMLEEGGEEGWGEGGGEVGRRCLAMGEEIGRAVEEEGVV 266
+CG+++R A ++ PYANAFN N S HG DQ PPMS V+E KYE+DSLAA L+L+ YY T D CF D+ +L A ++DT+ +Q+ T ++ Y FQRET VA++T G G +R + + FRPSDD+ PF +P NA+ VEL+++ +L G + R + + EI A+++ G V
Sbjct: 158 MLCGVIQRQA-EMVVADPYANAFNANAS--GHGWSRDQRRPPMSGIVFEGKYELDSLAAVLKLANQYYASTSDRTCFTLNDNR------------------FLRAATTIVDTITNEQSSTANNVDDA------------TYLFQRETTVATDTLM-LQGRGAPGKRTGMSKCYFRPSDDSNTFPFSIPSNAIACVELRKLSALLLT--VYGDNAEATRLASRAVLLSGEIADAIDQHGTV 361
BLAST of EWM21262.1 vs. NCBI_GenBank
Match: gi|1032151865|gb|OAO15375.1| (hypothetical protein AV274_2904 [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 124.79 bits (312), Expect = 8.977e-29 Identity = 81/249 (32.53%), Postives = 119/249 (47.79%), Query Frame = 0
Query: 27 QVCGLVRRHAYSLLHVHPYANAFNFNDSNLSHGHHDDQVHPP---------MSAGVWEAKYEVDSLAAFLRLSRSYYQHTHDLACFQYPDSPSLPPSASSPPSSSPSSSLWLGAVRLVLDTLQAQQAGTLEHLPSVPPSFPPSLPPSFPYTFQRETRVASETQWGAAGEGGASRRCALVRSAFRPSDDATLLPFHLPGNAMLSVELKEVGKMLEEGGEEGWGEGGGEVGRRCLAMGEEIGRAVEEEGVV 266
+ G++ R S+L + PYANAFNF+ + H DD P M+ ++E K+E+DSLAA L LS YY T D +P ++ W+ AV+L++DT + Q G+ + S+ Y+F R +ET GEG S+ L+RSAFRPSDDAT LP+ +PGN ML V L+ +LE+ G EV + L + +EI A+ ++
Sbjct: 110 MIRGVLNRQVKSVL-IDPYANAFNFDRTGHPDSHTDDNTKRPAALGTRQNAMTPDIFERKFEIDSLAAVLSLSHQYYNATED---------------------PTPFNARWVKAVKLIIDTARKNQIGSGPY-------------TSYEYSFTRSCNRPTETIMD--GEGWPSKFTGLIRSAFRPSDDATKLPYFIPGNVMLLVGLRRCAPILEDVA------GAPEVAKEALKLAQEIDDAMHRFAIL 315
BLAST of EWM21262.1 vs. NCBI_GenBank
Match: gi|1001609313|gb|KXS13102.1| (glycoside hydrolase family 125 protein [Gonapodya prolifera JEL478]) HSP 1 Score: 124.405 bits (311), Expect = 1.249e-28 Identity = 102/287 (35.54%), Postives = 132/287 (45.99%), Query Frame = 0
Query: 28 VCGLVRRHAYSLLHVHPYANAFNFNDSNLSHGHHDDQVHP--PMSAGVWEAKYEVDSLAAFLRLSRSYYQHTHDLACFQYPDSPSLPPSASSPPSSSPSSSLWLGAVRLVLDTLQAQQAGTLEHLPSVPPSFPPSLPPSFPYTFQRETRVASETQWGAAGEGGASRRCALVRSAFRPSDDATLLPFHLPGNAMLSVELKEVGKMLEEGGEEGW-GEGG-------GEVGRRCLAMGEEIGRAVEEEGVVWVKRREGGRGGKEEAEGGGCGMEGMESVYAYEVRGQGE 304
V GLV R A + PYANAF D D V P P + VWEAK+EVDSLAAF +LS +Y++H S P P+ +WL AV L L+ QQ G++E P+ Y F R T A++T G G + RC LV+SAFRPSDDA+LLPF +P NAML VEL+ + ++L G W GE + + EE+ A+ + GVV KEE E ++AYEV G G
Sbjct: 114 VLGLVYRQA-KCVAAFPYANAFK-RDGGQKGMWDGDAVTPDVPQGSVVWEAKWEVDSLAAFFKLSNAYHRHKR------------------SSPFIDPAHPIWLAAVERALAVLREQQRGSMEEAELAQPA----------YRFARLTDRATDTL-AMDGGGWPAARCGLVKSAFRPSDDASLLPFPIPANAMLCVELRHLVELL-NGVLATWNGETARDYYTQLANAAKEATDLAEEVFEALAKWGVV-----------KEEG----------EDMFAYEVDGFGN 347
BLAST of EWM21262.1 vs. NCBI_GenBank
Match: gi|671691805|emb|CDS06540.1| (hypothetical protein LRAMOSA09068 [Lichtheimia ramosa]) HSP 1 Score: 121.324 bits (303), Expect = 2.340e-27 Identity = 90/279 (32.26%), Postives = 131/279 (46.95%), Query Frame = 0
Query: 29 CGLVRRHAYSLLHVHPYANAFN--FNDSNLSHGHHDDQVHPPMSAGVWEAKYEVDSLAAFLRLSRSYYQHTHDLACFQYPDSPSLPPSASSPPSSSPSSSLWLGAVRLVLDTLQAQQAGTLEHLPSVPPSFPPSL--PPSFPYTFQRETRVASETQWGAAGEGGASRRCALVRSAFRPSDDATLLPFHLPGNAMLSVELKEVGKMLEEGGEEGWGEGGGEVGRRCLAMGEEIGRAVEEEGVVWVKRREGGRGGKEEAEGGGCGMEGMESVYAYEVRGQG 303
GL+ A +H+ PYANAFN + N + GV+E K+E+DSLA+FL S Y+ T D S S W+ AV VL T+Q QQ P+F P+ P + YTF + T +ETQ+ G G A +R LV+S FRPSDDAT+ PF +PGNA +SVEL + +ML + G GG + + ++ E++ ++ G + + R+ + + G + V+AYEV G G
Sbjct: 128 LGLIHMQA-QFVHLAPYANAFNEPVSMKNGVEKRENFNAAHTQQEGVYEYKWEIDSLASFLGFSYRYWNMTGD--------------------DSFVRSDTWVDAVNDVLRTIQEQQE----------PTFDPNTGEPMTPHYTFTQNTDRPTETQFNE-GIGNAVQRTGLVKSLFRPSDDATIFPFFIPGNAQISVELAHISQMLSQIHGNNKGTGGDQ---QVVSNQEQLKSIADQSGQLAKEIRDAIY------KYAVVDVPGFDKVFAYEVDGYG 365
BLAST of EWM21262.1 vs. NCBI_GenBank
Match: gi|661179091|emb|CDH58158.1| (duf1237 domain protein [Lichtheimia corymbifera JMRC:FSU:9682]) HSP 1 Score: 121.709 bits (304), Expect = 3.387e-27 Identity = 93/290 (32.07%), Postives = 136/290 (46.90%), Query Frame = 0
Query: 30 GLVRRHAYSLLHVHPYANAFN------------FNDSNLSHGHHDDQVHPPMSAGVWEAKYEVDSLAAFLRLSRSYYQHTHDLACFQYPDSPSLPPSASSPPSSSPSSSLWLGAVRLVLDTLQAQQAGTLEHLPSVPPSFPPSL--PPSFPYTFQRETRVASETQWGAAGEGGASRRCALVRSAFRPSDDATLLPFHLPGNAMLSVELKEVGKMLEE--GGEEGWGEGGGEVGRRCLAMGEEIGRAVEEEGVVWVKRREGGRGGKEEAEGGGCGMEGMESVYAYEVRGQG 303
GL+ A +H+ PYANAFN + N +H H + GV+E K+E+DSLA+FL S Y+ T D S S W+ AV VL T+Q QQ P+F P+ P + YTF + T +ETQ+ G G A +R LV+S FRPSDDAT+ PF +PGNA +SVEL + +ML + G + GGG ++ ++ E++ ++ G + + R+ + + G + V+AYEV G G
Sbjct: 236 GLIHMQA-QFVHLAPYANAFNEPVSMRSDGMEKRENFNAAHTHQE---------GVYEYKWEIDSLASFLGFSYRYWNMTGD--------------------DSFVRSDTWVDAVNDVLRTIQEQQE----------PTFDPNTGEPMTPHYTFTQNTDRPTETQFNE-GIGNAVQRTGLVKSLFRPSDDATIFPFFIPGNAQMSVELTHISQMLSQIHGNNKA---GGGGSDKQVVSKQEQLKAIADQSGQLAKEIRDA------IYKYAVVDVPGFDKVFAYEVDGYG 475
BLAST of EWM21262.1 vs. NCBI_GenBank
Match: gi|1183457353|gb|ORY81404.1| (DUF1237 domain-containing protein [Protomyces lactucaedebilis]) HSP 1 Score: 118.242 bits (295), Expect = 2.904e-26 Identity = 89/284 (31.34%), Postives = 134/284 (47.18%), Query Frame = 0
Query: 28 VCGLVRRHAYSLLHVHPYANAFN-FNDSNLSHGHHD----DQVHPPMSAG-VWEAKYEVDSLAAFLRLSRSYYQHTHDLACFQYPDSPSLPPSASSPPSSSPSSSLWLGAVRLVLDTLQAQQAGTLEHLPSVPPSFPPSLPPSFP-YTFQRETRVASETQWGAAGEGGASRRCALVRSAFRPSDDATLLPFHLPGNAMLSVELKEVGKMLE-EGGEEGWGEGGGEVGRRCLAMGEEIGRAVEEEGVVWVKRREGGRGGKEEAEGGGCGMEGMESVYAYEVRGQG 303
+ G V+ AY ++ PY N+F F +S ++ ++ D V P + V+E KYE+DSLAAFLR+SR YY+H+ D + F ++ W+ AV+ V + A+ PSF S P YTFQR T +A+ET + ++VRSAFRPSDD+T+L + +PGNAMLSVEL + +L+ G ++ + + + + I A+ E V+ E GK V+AYE+ G G
Sbjct: 161 IAGAVQSQAY-FVNTSPYCNSFQPFPESGVAPTVNEYGKADVVKPKIDKNKVFECKYEIDSLAAFLRISRMYYEHSQDNSMF---------------------TAAWIKAVKNVFSVIAAESR----------PSFNSSGIFQVPAYTFQRTTDLATETLAILGAGYPVNGNVSMVRSAFRPSDDSTILQYFVPGNAMLSVELGHLSSLLKAAGNQKAIASNVTGLADKAMNLSTSIRNAIYEHAVI-----EHPIYGK---------------VFAYEIDGYG 392
BLAST of EWM21262.1 vs. NCBI_GenBank
Match: gi|855306050|ref|XP_012895626.1| (uncharacterized protein [Blastocystis hominis] >gi|300121197|emb|CBK21578.2| unnamed protein product [Blastocystis hominis]) HSP 1 Score: 116.701 bits (291), Expect = 6.926e-26 Identity = 79/248 (31.85%), Postives = 116/248 (46.77%), Query Frame = 0
Query: 28 VCGLVRRHAYSLLHVHPYANAFNFNDSNLSHGHHDDQVHPP---------MSAGVWEAKYEVDSLAAFLRLSRSYYQHTHDLACFQYPDSPSLPPSASSPPSSSPSSSLWLGAVRLVLDTLQAQQAGTLEHLPSVPPSFPPSLPPSFPYTFQRETRVASETQWGAAGEGGASRRCALVRSAFRPSDDATLLPFHLPGNAMLSVELKEVGKMLEEGGEEGWGEGGGEVGRRCLAMGEEIGRAVEEEGVV 266
+ G++ R S+L + PYANAFNF+ + H DD P M++ ++E K+E+DSLAA L LS YY T D ++P ++ W AV+L++ T + Q + + S+ Y+F R +ET GEG SR L+RSAFRPSDDAT LPF +PGN M V L+ K+L + G + + + +EI AV+ V+
Sbjct: 111 IRGVLNRQVKSVL-IDPYANAFNFDKTGHPDSHTDDSTKRPAALGTRQNAMNSYIFERKFEIDSLAAVLALSHQYYNATGD---------------------ATPFNARWAKAVKLMIQTARNNQIASGPY-------------TSYEYSFTRMCNRPTETLMD--GEGWPSRYTGLIRSAFRPSDDATKLPFFIPGNIMFLVNLRHCAKILRD------VVGDAVLAAEAMKLAQEIDDAVQNFAVL 315
BLAST of EWM21262.1 vs. NCBI_GenBank
Match: gi|576042434|ref|XP_006695090.1| (hypothetical protein CTHT_0047200 [Chaetomium thermophilum var. thermophilum DSM 1495] >gi|340939583|gb|EGS20205.1| hypothetical protein CTHT_0047200 [Chaetomium thermophilum var. thermophilum DSM 1495]) HSP 1 Score: 114.775 bits (286), Expect = 4.891e-25 Identity = 91/280 (32.50%), Postives = 132/280 (47.14%), Query Frame = 0
Query: 30 GLVRRHAYSLLHVHPYANAFNF-NDSNLSHGHHD----DQVHPPMSA-GVWEAKYEVDSLAAFLRLSRSYYQHTHDLACFQYPDSPSLPPSASSPPSSSPSSSLWLGAVRLVLDTLQAQQAGTLEHLPSVPPSFPPSLPPSFPYTFQRETRVASETQWGAAGEGGASRRCALVRSAFRPSDDATLLPFHLPGNAMLSVELKEVGKMLEEGGEEGWGEGGGEVGRRCLAMGEEIGRAVEEEGVVWVKRREGGRGGKEEAEGGGCGMEGMESVYAYEVRGQG 303
G++ A +L P+ NAF ++ + G ++ D V PP + V+E K+E+DSLAAFL LS Y+ TH A F S+ WL A+R +L TL+ Q+ P+ P LP YTFQR+T A+ET G G +RR +VR+AFRPSDDA LP+++PGN M+ L + + G++ + + A+ EI AV++ G+V + G +E VYAYEV G G
Sbjct: 161 GVINLQARYILS-SPFCNAFQPPAEAGIPRGVNEFAMADAVAPPPNGETVFECKFEIDSLAAFLHLSADYHDATHHTAFFS-------------------SAKNWLPAIRTILSTLRTMQS------PTYDPQNGTVLPAG--YTFQRQTTRATETT-DNDGRGHPARRTGMVRTAFRPSDDAAALPYNIPGNMMIVTGLARAATIADAVGDKSLAD-------KMRALQGEIDEAVKKFGIVPILTESG----------------DIERVYAYEVDGFG 388 The following BLAST results are available for this feature:
BLAST of EWM21262.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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