EWM21277.1, cds9398 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21277.1 vs. NCBI_GenBank
Match: gi|585101432|gb|EWM21277.1| (caltractin [Nannochloropsis gaditana]) HSP 1 Score: 379.022 bits (972), Expect = 7.729e-133 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
Query: 1 MASGISSSRFRQGAGLGSPPSRRPKPGAKGKGLDEEELEEIREAFNLFDSDGKGTIDVRELKAAFRALGFQVKKAEIRTFLQTIDKEMAATVTYDEFLDMAAPKVANRDEREEIQKVFALFDDDGTGAISFRNLKRVATELGENLTDEELQEMIDEADRDQDGVINEEEFFRVMRKRGNAPLDDIDSDDDY 191
MASGISSSRFRQGAGLGSPPSRRPKPGAKGKGLDEEELEEIREAFNLFDSDGKGTIDVRELKAAFRALGFQVKKAEIRTFLQTIDKEMAATVTYDEFLDMAAPKVANRDEREEIQKVFALFDDDGTGAISFRNLKRVATELGENLTDEELQEMIDEADRDQDGVINEEEFFRVMRKRGNAPLDDIDSDDDY
Sbjct: 1 MASGISSSRFRQGAGLGSPPSRRPKPGAKGKGLDEEELEEIREAFNLFDSDGKGTIDVRELKAAFRALGFQVKKAEIRTFLQTIDKEMAATVTYDEFLDMAAPKVANRDEREEIQKVFALFDDDGTGAISFRNLKRVATELGENLTDEELQEMIDEADRDQDGVINEEEFFRVMRKRGNAPLDDIDSDDDY 191
BLAST of EWM21277.1 vs. NCBI_GenBank
Match: gi|553187750|ref|XP_005854672.1| (caltractin, partial [Nannochloropsis gaditana CCMP526] >gi|422294389|gb|EKU21689.1| caltractin, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 306.605 bits (784), Expect = 1.083e-104 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
Query: 1 MASGISSSRFRQGAGLGSPPSRRPKPGAKGKGLDEEELEEIREAFNLFDSDGKGTIDVRELKAAFRALGFQVKKAEIRTFLQTIDKEMAATVTYDEFLDMAAPKVANRDEREEIQKVFALFDDDGTGAISFRNLKRVATELGENLTDEELQEMI 154
MASGISSSRFRQGAGLGSPPSRRPKPGAKGKGLDEEELEEIREAFNLFDSDGKGTIDVRELKAAFRALGFQVKKAEIRTFLQTIDKEMAATVTYDEFLDMAAPKVANRDEREEIQKVFALFDDDGTGAISFRNLKRVATELGENLTDEELQEMI
Sbjct: 1 MASGISSSRFRQGAGLGSPPSRRPKPGAKGKGLDEEELEEIREAFNLFDSDGKGTIDVRELKAAFRALGFQVKKAEIRTFLQTIDKEMAATVTYDEFLDMAAPKVANRDEREEIQKVFALFDDDGTGAISFRNLKRVATELGENLTDEELQEMI 154
BLAST of EWM21277.1 vs. NCBI_GenBank
Match: gi|301119597|ref|XP_002907526.1| (caltractin [Phytophthora infestans T30-4] >gi|262106038|gb|EEY64090.1| caltractin [Phytophthora infestans T30-4]) HSP 1 Score: 223.016 bits (567), Expect = 3.122e-71 Identity = 113/160 (70.62%), Postives = 130/160 (81.25%), Query Frame = 0
Query: 22 RRPKPGAKGKGLDEEELEEIREAFNLFDSDGKGTIDVRELKAAFRALGFQVKKAEIRTFLQTIDKEMAATVTYDEFLDMAAPKVANRDEREEIQKVFALFDDDGTGAISFRNLKRVATELGENLTDEELQEMIDEADRDQDGVINEEEFFRVMRKRGNAP 181
R+PKP K LDEE+LEEI+EAF+LFD+DG G+IDVRELKAA RALGFQVKKAEIR + IDK+ + T+ DEF++M K+ +RD REEI K+F LFDDD TG ISFRNLKRV TELGENLTDEE+QEMIDEADRD DG INEEEFFRVM+KR P
Sbjct: 21 RKPKPVKKV--LDEEDLEEIKEAFHLFDTDGSGSIDVRELKAAMRALGFQVKKAEIRQMIADIDKDESGTINLDEFIEMMTGKMNSRDSREEIMKIFQLFDDDNTGKISFRNLKRVCTELGENLTDEEMQEMIDEADRDGDGFINEEEFFRVMKKRSGNP 178
BLAST of EWM21277.1 vs. NCBI_GenBank
Match: gi|675176505|ref|XP_008897137.1| (hypothetical protein PPTG_05358 [Phytophthora parasitica INRA-310] >gi|566011264|gb|ETI34175.1| hypothetical protein F443_19253 [Phytophthora parasitica P1569] >gi|568006968|gb|ETL81213.1| hypothetical protein L917_18407 [Phytophthora parasitica] >gi|568036813|gb|ETM34415.1| hypothetical protein L914_18494 [Phytophthora parasitica] >gi|568102918|gb|ETN17589.1| hypothetical protein PPTG_05358 [Phytophthora parasitica INRA-310] >gi|570315111|gb|ETO63059.1| hypothetical protein F444_19206 [Phytophthora parasitica P1976] >gi|570938825|gb|ETP04082.1| hypothetical protein F441_19068 [Phytophthora parasitica CJ01A1] >gi|570969155|gb|ETP32274.1| hypothetical protein F442_19030 [Phytophthora parasitica P10297] >gi|970645246|gb|KUF85775.1| Caltractin [Phytophthora nicotianae]) HSP 1 Score: 222.631 bits (566), Expect = 4.429e-71 Identity = 112/160 (70.00%), Postives = 130/160 (81.25%), Query Frame = 0
Query: 22 RRPKPGAKGKGLDEEELEEIREAFNLFDSDGKGTIDVRELKAAFRALGFQVKKAEIRTFLQTIDKEMAATVTYDEFLDMAAPKVANRDEREEIQKVFALFDDDGTGAISFRNLKRVATELGENLTDEELQEMIDEADRDQDGVINEEEFFRVMRKRGNAP 181
R+PKP K LDEE+LEEI+EAF+LFD+DG G+IDVRELKAA RALGFQVKKAEIR + IDK+ + T+ DEF++M K+ +RD REEI K+F LFDDD TG ISFRNLKRV TELGE LTDEE+QEMIDEADRD DG+INEEEFFRVM+KR P
Sbjct: 19 RKPKPVKKA--LDEEDLEEIKEAFHLFDTDGSGSIDVRELKAAMRALGFQVKKAEIRQMIADIDKDESGTINLDEFIEMMTGKMNSRDSREEIMKIFQLFDDDNTGKISFRNLKRVCTELGETLTDEEMQEMIDEADRDGDGLINEEEFFRVMKKRSGNP 176
BLAST of EWM21277.1 vs. NCBI_GenBank
Match: gi|695382217|ref|XP_009517330.1| (hypothetical protein PHYSODRAFT_476233 [Phytophthora sojae] >gi|197320676|gb|ACH68466.1| calcium-dependent protein 5 [Phytophthora sojae] >gi|348690241|gb|EGZ30055.1| hypothetical protein PHYSODRAFT_476233 [Phytophthora sojae]) HSP 1 Score: 221.861 bits (564), Expect = 7.402e-71 Identity = 112/160 (70.00%), Postives = 129/160 (80.62%), Query Frame = 0
Query: 22 RRPKPGAKGKGLDEEELEEIREAFNLFDSDGKGTIDVRELKAAFRALGFQVKKAEIRTFLQTIDKEMAATVTYDEFLDMAAPKVANRDEREEIQKVFALFDDDGTGAISFRNLKRVATELGENLTDEELQEMIDEADRDQDGVINEEEFFRVMRKRGNAP 181
R+PKP K LDEE+LEEI+EAF+LFD+DG GTIDVRELKAA RALGFQVKKAEIR + IDK+ + + DEF++M K+ +RD REEI K+F LFDDD TG ISFRNLKRV TELGE LTDEE+QEMIDEADRD DG+INEEEFFRVM+KR P
Sbjct: 15 RKPKPVKKA--LDEEDLEEIKEAFHLFDTDGSGTIDVRELKAAMRALGFQVKKAEIRQMIADIDKDESGAINLDEFIEMMTGKMNSRDSREEIMKIFQLFDDDNTGKISFRNLKRVCTELGETLTDEEMQEMIDEADRDGDGLINEEEFFRVMKKRSGNP 172
BLAST of EWM21277.1 vs. NCBI_GenBank
Match: gi|301089016|ref|XP_002894861.1| (caltractin [Phytophthora infestans T30-4] >gi|262106675|gb|EEY64727.1| caltractin [Phytophthora infestans T30-4]) HSP 1 Score: 221.476 bits (563), Expect = 1.109e-70 Identity = 112/160 (70.00%), Postives = 129/160 (80.62%), Query Frame = 0
Query: 22 RRPKPGAKGKGLDEEELEEIREAFNLFDSDGKGTIDVRELKAAFRALGFQVKKAEIRTFLQTIDKEMAATVTYDEFLDMAAPKVANRDEREEIQKVFALFDDDGTGAISFRNLKRVATELGENLTDEELQEMIDEADRDQDGVINEEEFFRVMRKRGNAP 181
R+PKP K LDEE+LEEI+EAF+LFD+DG G+IDVRELKAA RALGFQVKKAEIR + IDK+ + T+ DEF++M K+ +RD REEI K+F LFDDD TG ISFRNLKRV TELGENLTDEE+QEMIDEAD D DG INEEEFFRVM+KR P
Sbjct: 15 RKPKPVKKV--LDEEDLEEIKEAFHLFDTDGSGSIDVRELKAAMRALGFQVKKAEIRQMIADIDKDESGTINLDEFIEMMTGKMNSRDSREEIMKIFQLFDDDNTGKISFRNLKRVCTELGENLTDEEMQEMIDEADHDGDGFINEEEFFRVMKKRSGNP 172
BLAST of EWM21277.1 vs. NCBI_GenBank
Match: gi|676398553|ref|XP_009042554.1| (hypothetical protein AURANDRAFT_39492 [Aureococcus anophagefferens] >gi|323446669|gb|EGB02747.1| hypothetical protein AURANDRAFT_39492 [Aureococcus anophagefferens]) HSP 1 Score: 221.476 bits (563), Expect = 1.382e-70 Identity = 125/176 (71.02%), Postives = 143/176 (81.25%), Query Frame = 0
Query: 6 SSSRFRQGAGLGSPPSRRPKPGAKGKGLDEEELEEIREAFNLFDSDGKGTIDVRELKAAFRALGFQVKKAEIRTFLQTIDKEMAATVTYDEFLDMAAPKVANRDEREEIQKVFALFDDDGTGAISFRNLKRVATELGENLTDEELQEMIDEADRDQDGVINEEEFFRVMRKRGNAP 181
S SR G G SR PK G+ EEE+EEIREAFNLFD++GKG ID++ELKAAFRALGFQVKKAEIR +Q +DKE + TV +DEF++MA PK+ +RD REEI KVFALFDDD TGAISFRNLKRVA ELGENLTDEELQEMIDEADRD DG+INE+EFFRVM+KRG+ P
Sbjct: 11 SGSRALSGRPGGGRASRAPKRA----GVSEEEMEEIREAFNLFDTEGKGVIDIKELKAAFRALGFQVKKAEIRRMMQDVDKESSPTVLFDEFVEMATPKMQSRDTREEIMKVFALFDDDQTGAISFRNLKRVANELGENLTDEELQEMIDEADRDGDGMINEDEFFRVMKKRGDNP 182
BLAST of EWM21277.1 vs. NCBI_GenBank
Match: gi|567948807|gb|ETK74545.1| (hypothetical protein L915_18679 [Phytophthora parasitica] >gi|567977464|gb|ETL27966.1| hypothetical protein L916_18584 [Phytophthora parasitica]) HSP 1 Score: 220.705 bits (561), Expect = 1.939e-70 Identity = 111/160 (69.38%), Postives = 129/160 (80.62%), Query Frame = 0
Query: 22 RRPKPGAKGKGLDEEELEEIREAFNLFDSDGKGTIDVRELKAAFRALGFQVKKAEIRTFLQTIDKEMAATVTYDEFLDMAAPKVANRDEREEIQKVFALFDDDGTGAISFRNLKRVATELGENLTDEELQEMIDEADRDQDGVINEEEFFRVMRKRGNAP 181
R+PKP K LDEE+LEEI+EAF+LFD+DG G+IDVRELKAA RALGFQVKKAEIR + IDK+ + T+ DEF++M K+ +RD REEI K+ LFDDD TG ISFRNLKRV TELGE LTDEE+QEMIDEADRD DG+INEEEFFRVM+KR P
Sbjct: 19 RKPKPVKKA--LDEEDLEEIKEAFHLFDTDGSGSIDVRELKAAMRALGFQVKKAEIRQMIADIDKDESGTINLDEFIEMMTGKMNSRDSREEIMKILQLFDDDNTGKISFRNLKRVCTELGETLTDEEMQEMIDEADRDGDGLINEEEFFRVMKKRSGNP 176
BLAST of EWM21277.1 vs. NCBI_GenBank
Match: gi|1214713391|gb|OWZ24286.1| (Caltractin [Phytophthora megakarya]) HSP 1 Score: 220.32 bits (560), Expect = 3.068e-70 Identity = 111/160 (69.38%), Postives = 129/160 (80.62%), Query Frame = 0
Query: 22 RRPKPGAKGKGLDEEELEEIREAFNLFDSDGKGTIDVRELKAAFRALGFQVKKAEIRTFLQTIDKEMAATVTYDEFLDMAAPKVANRDEREEIQKVFALFDDDGTGAISFRNLKRVATELGENLTDEELQEMIDEADRDQDGVINEEEFFRVMRKRGNAP 181
R+PKP K LDE++LEEI+EAF+LFD+DG G+IDVRELKAA RALGFQVKKAEIR + IDK+ + T+ DEF++M K+ +RD REEI K F LFDDD TG ISFRNLKRV TELGE LTDEE+QEMIDEADRD DG+INEEEFFRVM+KR P
Sbjct: 15 RKPKPVKKA--LDEDDLEEIKEAFHLFDTDGSGSIDVRELKAAMRALGFQVKKAEIRQMIADIDKDESGTINLDEFIEMMTGKMNSRDSREEIMKTFQLFDDDNTGKISFRNLKRVCTELGETLTDEEMQEMIDEADRDGDGLINEEEFFRVMKKRSGNP 172
BLAST of EWM21277.1 vs. NCBI_GenBank
Match: gi|299116056|emb|CBN74472.1| (putative: similar to centrin [Ectocarpus siliculosus]) HSP 1 Score: 219.935 bits (559), Expect = 3.903e-70 Identity = 107/145 (73.79%), Postives = 129/145 (88.97%), Query Frame = 0
Query: 33 LDEEELEEIREAFNLFDSDGKGTIDVRELKAAFRALGFQVKKAEIRTFLQTIDKEMAATVTYDEFLDMAAPKVANRDEREEIQKVFALFDDDGTGAISFRNLKRVATELGENLTDEELQEMIDEADRDQDGVINEEEFFRVMRKR 177
LDEE +EEI+EAF+LFD++GKG ID+RELKAAFRALGFQVKK EIR L +DKE AA+V++++F++M PKV RD ++EI K+FALFD+DGTG ISFRNLKRVATELGENLTD+ELQEMIDEADRDQDGV+N +EF+RVMRKR
Sbjct: 25 LDEESMEEIKEAFSLFDTEGKGAIDIRELKAAFRALGFQVKKQEIRGMLTDVDKEGAASVSFNDFVEMVTPKVLARDPKDEIMKIFALFDEDGTGGISFRNLKRVATELGENLTDDELQEMIDEADRDQDGVVNADEFYRVMRKR 169 The following BLAST results are available for this feature:
BLAST of EWM21277.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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