EWM29773.1, cds939 (CDS) Nannochloropsis gaditana

Overview
NameEWM29773.1
Unique Namecds939
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:781053..781155 -
Alignment locationCM002456.1:780255..780832 -
Alignment locationCM002456.1:779438..780106 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29773.1
Productisocitrate dehydrogenase
Orig transcript idgnl|cribi|Naga_100022g53.872.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:781053..781155 -
CM002456.1supercontigCM002456.1:780255..780832 -
CM002456.1supercontigCM002456.1:779438..780106 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0005515protein binding
GO:0000166nucleotide binding
GO:0000287magnesium ion binding
GO:0051287NAD binding
GO:0004450isocitrate dehydrogenase (NADP+) activity
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Vocabulary: Biological Process
TermDefinition
GO:0006091generation of precursor metabolites and energy
GO:0006102isocitrate metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR019818IsoCit/isopropylmalate_DH_CS
IPR004790Isocitrate_DH_NADP
IPR024084IsoPropMal-DH-like_dom
Homology
BLAST of EWM29773.1 vs. NCBI_GenBank
Match: gi|585112353|gb|EWM29773.1| (isocitrate dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 933.71 bits (2412), Expect = 0.000e+0
Identity = 449/449 (100.00%), Postives = 449/449 (100.00%), Query Frame = 0
Query:    1 MMRSVGFISSRTVSQTSSFSSSPPALYRLMDSRSFSRTAAVGAKIKVENPVVDLDGDEMTRVIWKQIKDKLILPYLDLKIEYYDLGLPNRDKTNDQVTVDAANAIKKFNVGIKCATITPDEQRVEEFKLKEMWRSPNGTIRNILNGTVFREPIVISNIPRIIPGWVKPIVVGRHAFGDQYRATDFVVDKPGKFEMTFTSTDGTEKKTWNVFDFKGAGVGMAMYNTDESIRGFAHSCFAYALMKGWPLFLSTKNTILKKYDGRFKDIFEEIYEKEYKAQYEAMGITYTHRLIDDMVAQVLKSEGGVVWACKNYDGDVQSDIVAQGYGSLGLMTSVLITPDGKTVESEAAHGTVTRHWREYQKGKPTSTNPIASIFAWTRGLQHRAKLDNNPILTKFSLDMEAAVIKTVEKGFMTKDLAICVHGWTVSPDKYLTTDAFLDKVKLTYENLVL 449
            MMRSVGFISSRTVSQTSSFSSSPPALYRLMDSRSFSRTAAVGAKIKVENPVVDLDGDEMTRVIWKQIKDKLILPYLDLKIEYYDLGLPNRDKTNDQVTVDAANAIKKFNVGIKCATITPDEQRVEEFKLKEMWRSPNGTIRNILNGTVFREPIVISNIPRIIPGWVKPIVVGRHAFGDQYRATDFVVDKPGKFEMTFTSTDGTEKKTWNVFDFKGAGVGMAMYNTDESIRGFAHSCFAYALMKGWPLFLSTKNTILKKYDGRFKDIFEEIYEKEYKAQYEAMGITYTHRLIDDMVAQVLKSEGGVVWACKNYDGDVQSDIVAQGYGSLGLMTSVLITPDGKTVESEAAHGTVTRHWREYQKGKPTSTNPIASIFAWTRGLQHRAKLDNNPILTKFSLDMEAAVIKTVEKGFMTKDLAICVHGWTVSPDKYLTTDAFLDKVKLTYENLVL
Sbjct:    1 MMRSVGFISSRTVSQTSSFSSSPPALYRLMDSRSFSRTAAVGAKIKVENPVVDLDGDEMTRVIWKQIKDKLILPYLDLKIEYYDLGLPNRDKTNDQVTVDAANAIKKFNVGIKCATITPDEQRVEEFKLKEMWRSPNGTIRNILNGTVFREPIVISNIPRIIPGWVKPIVVGRHAFGDQYRATDFVVDKPGKFEMTFTSTDGTEKKTWNVFDFKGAGVGMAMYNTDESIRGFAHSCFAYALMKGWPLFLSTKNTILKKYDGRFKDIFEEIYEKEYKAQYEAMGITYTHRLIDDMVAQVLKSEGGVVWACKNYDGDVQSDIVAQGYGSLGLMTSVLITPDGKTVESEAAHGTVTRHWREYQKGKPTSTNPIASIFAWTRGLQHRAKLDNNPILTKFSLDMEAAVIKTVEKGFMTKDLAICVHGWTVSPDKYLTTDAFLDKVKLTYENLVL 449          
BLAST of EWM29773.1 vs. NCBI_GenBank
Match: gi|298712975|emb|CBJ26877.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 687.952 bits (1774), Expect = 0.000e+0
Identity = 329/449 (73.27%), Postives = 376/449 (83.74%), Query Frame = 0
Query:    1 MMRSVGFISSRTV--SQTSSFSSSPPALYRLMDSRSFSRTAAV--GAKIKVENPVVDLDGDEMTRVIWKQIKDKLILPYLDLKIEYYDLGLPNRDKTNDQVTVDAANAIKKFNVGIKCATITPDEQRVEEFKLKEMWRSPNGTIRNILNGTVFREPIVISNIPRIIPGWVKPIVVGRHAFGDQYRATDFVVDKPGKFEMTFTSTDGTEKKTWNVFDFKGAGVGMAMYNTDESIRGFAHSCFAYALMKGWPLFLSTKNTILKKYDGRFKDIFEEIYEKEYKAQYEAMGITYTHRLIDDMVAQVLKSEGGVVWACKNYDGDVQSDIVAQGYGSLGLMTSVLITPDGKTVESEAAHGTVTRHWREYQKGKPTSTNPIASIFAWTRGLQHRAKLDNNPILTKFSLDMEAAVIKTVEKGFMTKDLAICVHGWTVSPDKYLTTDAFLDKVKLTYE 445
            MMR  G    RTV  S T++ +S+         +R  +RTA      KI V+NPVVDLDGDEMTR+IW  IK KLILPY+DL IEY+DLGLP+RD T+DQ+T+DAA+AI + NVGIKCATITPDEQR++EFKLK+MW+SPNGTIRNIL GTVFREPIVISNIPRI+PGW KPIVVGRHAFGDQY+ATDF+ + PGKFEM+F   DG E ++W V+DF+GAGVGMAMYNTDESIR FA SC  Y+L KGW LFLSTKNTILK YDGRFKDIF+EIYE EY+ Q+EA GITYTHRLIDDMVAQ LKS GG VWACKNYDGDVQSDIVAQGYGSLGLMTSVL+ PDG+TVESEAAHGTVTRHWREYQKG  TSTNPIASIFAWTRGLQHRAKLD+N  L  F+ ++E AVI+TVE G MTKDLAICVHGW V+ D+YL T+AF+D++K TY+
Sbjct:   10 MMRVAG----RTVRPSTTAALASA--------QTRGIARTATALSAKKIAVKNPVVDLDGDEMTRIIWDHIKSKLILPYVDLDIEYFDLGLPSRDATDDQITIDAAHAILEHNVGIKCATITPDEQRMDEFKLKKMWKSPNGTIRNILKGTVFREPIVISNIPRIVPGWTKPIVVGRHAFGDQYKATDFMANGPGKFEMSFKPADGGETQSWEVYDFEGAGVGMAMYNTDESIRAFARSCMNYSLSKGWDLFLSTKNTILKVYDGRFKDIFQEIYEDEYQEQFEARGITYTHRLIDDMVAQSLKSAGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLLAPDGRTVESEAAHGTVTRHWREYQKGNKTSTNPIASIFAWTRGLQHRAKLDDNKPLRVFTNNLEKAVIETVEAGHMTKDLAICVHGWNVTEDQYLMTEAFMDEIKNTYD 446          
BLAST of EWM29773.1 vs. NCBI_GenBank
Match: gi|669153052|ref|XP_008612088.1| (isocitrate dehydrogenase [NADP], mitochondrial [Saprolegnia diclina VS20] >gi|813110814|ref|XP_012195009.1| isocitrate dehydrogenase [Saprolegnia parasitica CBS 223.65] >gi|530736440|gb|EQC34682.1| isocitrate dehydrogenase [NADP], mitochondrial [Saprolegnia diclina VS20] >gi|641540350|gb|KDO34132.1| isocitrate dehydrogenase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 681.404 bits (1757), Expect = 0.000e+0
Identity = 319/415 (76.87%), Postives = 363/415 (87.47%), Query Frame = 0
Query:   32 SRSFSRTAAVGAKIKVENPVVDLDGDEMTRVIWKQIKDKLILPYLDLKIEYYDLGLPNRDKTNDQVTVDAANAIKKFNVGIKCATITPDEQRVEEFKLKEMWRSPNGTIRNILNGTVFREPIVISNIPRIIPGWVKPIVVGRHAFGDQYRATDFVVDKPGKFEMTFTSTDGTEKKTWNVFDFKGAGVGMAMYNTDESIRGFAHSCFAYALMKGWPLFLSTKNTILKKYDGRFKDIFEEIYEKEYKAQYEAMGITYTHRLIDDMVAQVLKSEGGVVWACKNYDGDVQSDIVAQGYGSLGLMTSVLITPDGKTVESEAAHGTVTRHWREYQKGKPTSTNPIASIFAWTRGLQHRAKLDNNPILTKFSLDMEAAVIKTVEKGFMTKDLAICVHGWT-VSPDKYLTTDAFLDKVKLTYE 445
            +R FS  A    KI V NPVVDLDGDEMTRVIW QIK K + PYLDL IEY+DLGLPNRD TNDQVT+DAA+AIK+FNVGIKCATITPDE+RV+EFKLK+MW+SPNGTIRNILNGTVFREPIVISN+PR++PGW KPIVVGRHAFGDQY+ TDFV + PGKFEM+FT  DG+ K++W V+DFKGAGVGM MYNT++SI  FAHSC ++AL K   L+LSTKNTILKKYDGRFKDIFEE+Y+ EYKA+Y+A GI+YTHRLIDDMVAQ LKS+GG VWACKNYDGDVQSDIVAQGYGSLGLMTSVL+ PDGKTVE+EAAHGTVTRHWREYQKGK TSTNPIAS++AWTRGL HR KLD N  L  F  D E+AVI+TVEKGFMTKDLAICVHG + V+PD+YLTT+ F+D+VK T +
Sbjct:   10 TRGFSSQAK---KIAVANPVVDLDGDEMTRVIWDQIKSKFVHPYLDLNIEYFDLGLPNRDATNDQVTIDAAHAIKEFNVGIKCATITPDEERVQEFKLKQMWKSPNGTIRNILNGTVFREPIVISNVPRLVPGWKKPIVVGRHAFGDQYKCTDFVANGPGKFEMSFTPADGSAKQSWEVYDFKGAGVGMGMYNTEDSIYAFAHSCLSFALTKKQDLYLSTKNTILKKYDGRFKDIFEEVYQAEYKAKYDAAGISYTHRLIDDMVAQALKSDGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLLAPDGKTVEAEAAHGTVTRHWREYQKGKATSTNPIASMYAWTRGLAHRGKLDGNNELITFCNDWESAVIETVEKGFMTKDLAICVHGTSNVTPDQYLTTEPFMDEVKKTLD 421          
BLAST of EWM29773.1 vs. NCBI_GenBank
Match: gi|1173947708|gb|OQR95917.1| (isocitrate dehydrogenase, mitochondrial precursor [Thraustotheca clavata])

HSP 1 Score: 674.47 bits (1739), Expect = 0.000e+0
Identity = 317/415 (76.39%), Postives = 360/415 (86.75%), Query Frame = 0
Query:   32 SRSFSRTAAVGAKIKVENPVVDLDGDEMTRVIWKQIKDKLILPYLDLKIEYYDLGLPNRDKTNDQVTVDAANAIKKFNVGIKCATITPDEQRVEEFKLKEMWRSPNGTIRNILNGTVFREPIVISNIPRIIPGWVKPIVVGRHAFGDQYRATDFVVDKPGKFEMTFTSTDGTEKKTWNVFDFKGAGVGMAMYNTDESIRGFAHSCFAYALMKGWPLFLSTKNTILKKYDGRFKDIFEEIYEKEYKAQYEAMGITYTHRLIDDMVAQVLKSEGGVVWACKNYDGDVQSDIVAQGYGSLGLMTSVLITPDGKTVESEAAHGTVTRHWREYQKGKPTSTNPIASIFAWTRGLQHRAKLDNNPILTKFSLDMEAAVIKTVEKGFMTKDLAICVHGWT-VSPDKYLTTDAFLDKVKLTYE 445
            SR FS  A    KI V NPVVDLDGDEMTRVIW QIK K + PYLD+ IEY+DLGLPNRD TNDQVT+DAA+AIK+FNVGIKCATITPDE+RVEEFKLK+MW+SPNGTIRNILNGTVFREPIVISN+PR++PGW KPIVVGRHAFGDQY+ TDFV + PGKFEM+FT  +G  K++W VFDFKG GVGM MYNT+ESI  FA+SC ++AL K   L+LSTKNTILKKYDGRFKDIFEE+Y+ E+K++Y+A GI+YTHRLIDDMVAQ LKS+GG VWACKNYDGDVQSDIVAQGYGSLGLMTSVL+ PDGKTVE+EAAHGTVTRHWREYQKGK TSTNPIAS++AWTRGL HR KLD N  L KF  D EA+VI+TVE G MTKDLAICVHG T V+PD+YLTT+ F+D+VK T +
Sbjct:   10 SRRFSSQAK---KIVVANPVVDLDGDEMTRVIWDQIKTKFVHPYLDVNIEYFDLGLPNRDVTNDQVTIDAAHAIKEFNVGIKCATITPDEERVEEFKLKQMWKSPNGTIRNILNGTVFREPIVISNVPRLVPGWKKPIVVGRHAFGDQYKCTDFVAEGPGKFEMSFTPANGGPKQSWEVFDFKGPGVGMGMYNTEESIYAFANSCLSFALNKKQDLYLSTKNTILKKYDGRFKDIFEEVYQNEFKSKYDAAGISYTHRLIDDMVAQALKSDGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLLAPDGKTVEAEAAHGTVTRHWREYQKGKATSTNPIASMYAWTRGLAHRGKLDGNDELIKFCNDWEASVIQTVENGHMTKDLAICVHGTTNVTPDQYLTTEPFMDEVKKTLD 421          
BLAST of EWM29773.1 vs. NCBI_GenBank
Match: gi|570316501|gb|ETO64449.1| (isocitrate dehydrogenase, NADP-dependent [Phytophthora parasitica P1976])

HSP 1 Score: 671.389 bits (1731), Expect = 0.000e+0
Identity = 312/409 (76.28%), Postives = 356/409 (87.04%), Query Frame = 0
Query:   37 RTAAVGAKIKVENPVVDLDGDEMTRVIWKQIKDKLILPYLDLKIEYYDLGLPNRDKTNDQVTVDAANAIKKFNVGIKCATITPDEQRVEEFKLKEMWRSPNGTIRNILNGTVFREPIVISNIPRIIPGWVKPIVVGRHAFGDQYRATDFVVDKPGKFEMTFTSTDGTEKKTWNVFDFKGAGVGMAMYNTDESIRGFAHSCFAYALMKGWPLFLSTKNTILKKYDGRFKDIFEEIYEKEYKAQYEAMGITYTHRLIDDMVAQVLKSEGGVVWACKNYDGDVQSDIVAQGYGSLGLMTSVLITPDGKTVESEAAHGTVTRHWREYQKGKPTSTNPIASIFAWTRGLQHRAKLDNNPILTKFSLDMEAAVIKTVEKGFMTKDLAICVHGWTVSPDKYLTTDAFLDKVKLTYE 445
            R  A   KIKV  P+V+LDGDEMTRVIW QIKDK I PYLDL IEY+DLGLP+RD TNDQVT+DAA+AI++ NVGIKCATITPDEQRVEEFKLK+MWRSPNGTIRNILNGTVFREPIVISN+PR++PGW KPIVVGRHAFGDQY++TDF+   PGKFE+ +T  DG +K+T+ V+DFKG GVG+AMYNTDESI GFA SC ++AL K   L+LSTKNTILKKYDGRFKDIFEE+Y+ E+KA+Y+A GI+YTHRLIDDMVAQ LKS+GG VWACKNYDGDVQSDIVAQGYGSLGLMTSVL+ PDGKTVE+EAAHGTVTRHWR+YQ+GK TSTNPIASI+AWTRGL HR KLD N  L  FSL +E AVIKTVE G MTKDLAIC+HG  V+PD YL T+ F+DKVK T++
Sbjct:   15 RGFATSQKIKVHKPIVELDGDEMTRVIWSQIKDKYIHPYLDLNIEYFDLGLPHRDATNDQVTIDAAHAIQEHNVGIKCATITPDEQRVEEFKLKKMWRSPNGTIRNILNGTVFREPIVISNVPRLVPGWKKPIVVGRHAFGDQYKSTDFIAPGPGKFEVVYTPADGGDKQTFEVYDFKGPGVGLAMYNTDESIYGFAKSCLSFALSKNQDLYLSTKNTILKKYDGRFKDIFEEVYQSEFKAKYDAAGISYTHRLIDDMVAQALKSDGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLVAPDGKTVEAEAAHGTVTRHWRQYQQGKKTSTNPIASIYAWTRGLAHRGKLDGNQELVDFSLGLEDAVIKTVEAGHMTKDLAICIHGSNVTPDHYLYTEDFMDKVKDTFD 423          
BLAST of EWM29773.1 vs. NCBI_GenBank
Match: gi|675175213|ref|XP_008896491.1| (isocitrate dehydrogenase, NADP-dependent [Phytophthora parasitica INRA-310] >gi|568104230|gb|ETN18887.1| isocitrate dehydrogenase, NADP-dependent [Phytophthora parasitica INRA-310] >gi|970665636|gb|KUG02231.1| Isocitrate dehydrogenase [Phytophthora nicotianae])

HSP 1 Score: 671.389 bits (1731), Expect = 0.000e+0
Identity = 312/409 (76.28%), Postives = 356/409 (87.04%), Query Frame = 0
Query:   37 RTAAVGAKIKVENPVVDLDGDEMTRVIWKQIKDKLILPYLDLKIEYYDLGLPNRDKTNDQVTVDAANAIKKFNVGIKCATITPDEQRVEEFKLKEMWRSPNGTIRNILNGTVFREPIVISNIPRIIPGWVKPIVVGRHAFGDQYRATDFVVDKPGKFEMTFTSTDGTEKKTWNVFDFKGAGVGMAMYNTDESIRGFAHSCFAYALMKGWPLFLSTKNTILKKYDGRFKDIFEEIYEKEYKAQYEAMGITYTHRLIDDMVAQVLKSEGGVVWACKNYDGDVQSDIVAQGYGSLGLMTSVLITPDGKTVESEAAHGTVTRHWREYQKGKPTSTNPIASIFAWTRGLQHRAKLDNNPILTKFSLDMEAAVIKTVEKGFMTKDLAICVHGWTVSPDKYLTTDAFLDKVKLTYE 445
            R  A   KIKV  P+V+LDGDEMTRVIW QIKDK I PYLDL IEY+DLGLP+RD TNDQVT+DAA+AI++ NVGIKCATITPDEQRVEEFKLK+MWRSPNGTIRNILNGTVFREPIVISN+PR++PGW KPIVVGRHAFGDQY++TDF+   PGKFE+ +T  DG +K+T+ V+DFKG GVG+AMYNTDESI GFA SC ++AL K   L+LSTKNTILKKYDGRFKDIFEE+Y+ E+KA+Y+A GI+YTHRLIDDMVAQ LKS+GG VWACKNYDGDVQSDIVAQGYGSLGLMTSVL+ PDGKTVE+EAAHGTVTRHWR+YQ+GK TSTNPIASI+AWTRGL HR KLD N  L  FSL +E AVIKTVE G MTKDLAIC+HG  V+PD YL T+ F+DKVK T++
Sbjct:   15 RGFATSQKIKVHKPIVELDGDEMTRVIWSQIKDKYIHPYLDLDIEYFDLGLPHRDATNDQVTIDAAHAIQEHNVGIKCATITPDEQRVEEFKLKKMWRSPNGTIRNILNGTVFREPIVISNVPRLVPGWKKPIVVGRHAFGDQYKSTDFIAPGPGKFEVVYTPADGGDKQTFEVYDFKGPGVGLAMYNTDESIYGFAKSCLSFALSKNQDLYLSTKNTILKKYDGRFKDIFEEVYQSEFKAKYDAAGISYTHRLIDDMVAQALKSDGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLVAPDGKTVEAEAAHGTVTRHWRQYQQGKKTSTNPIASIYAWTRGLAHRGKLDGNQELVNFSLGLEDAVIKTVEAGHMTKDLAICIHGSNVTPDHYLYTEDFMDKVKDTFD 423          
BLAST of EWM29773.1 vs. NCBI_GenBank
Match: gi|673023890|ref|XP_008865906.1| (isocitrate dehydrogenase, NADP-dependent [Aphanomyces invadans] >gi|574479134|gb|ETW06129.1| isocitrate dehydrogenase, NADP-dependent [Aphanomyces invadans])

HSP 1 Score: 671.003 bits (1730), Expect = 0.000e+0
Identity = 316/413 (76.51%), Postives = 359/413 (86.92%), Query Frame = 0
Query:   29 LMDSRSFSRTAAVGAKIKVENPVVDLDGDEMTRVIWKQIKDKLILPYLDLKIEYYDLGLPNRDKTNDQVTVDAANAIKKFNVGIKCATITPDEQRVEEFKLKEMWRSPNGTIRNILNGTVFREPIVISNIPRIIPGWVKPIVVGRHAFGDQYRATDFVVDKPGKFEMTFTSTDGTEKKTWNVFDFKGAGVGMAMYNTDESIRGFAHSCFAYALMKGWPLFLSTKNTILKKYDGRFKDIFEEIYEKEYKAQYEAMGITYTHRLIDDMVAQVLKSEGGVVWACKNYDGDVQSDIVAQGYGSLGLMTSVLITPDGKTVESEAAHGTVTRHWREYQKGKPTSTNPIASIFAWTRGLQHRAKLDNNPILTKFSLDMEAAVIKTVEKGFMTKDLAICVHGWT-VSPDKYLTTDAFLDKV 440
            L   RSFS       KI V NPVVDLDGDEMTRVIW QIK K + P LDLKIEY+DLGLP+RDKTNDQVT+DAA+AIK+FNVGIKCATITPDE+RV+EFKLK+MW+SPNGTIRNILNGTVFREPIVISN+PR++PGW KPIVVGRHAFGDQY+ TDFV   PGKF MTFT  DG + ++W V+D+KGAGVG+AMYNTDESI  FAHSC ++AL K   L+LSTKNTILKKYDGRFKDIFEE+Y+ EYK++Y+A GI+YTHRLIDDMVAQ LKS+GG VWACKNYDGDVQSDIVAQGYGSLGLMTSVL+ PDGKTVE+EAAHGTVTRHWREYQKGK TSTNPIAS++AWTRGL HR KLD N  L +F+ D EAAVI+TVE G MTKDLAICVHG + V+PD+YLTT+ F+D+V
Sbjct:    6 LAARRSFS----TAKKIAVANPVVDLDGDEMTRVIWDQIKAKFVHPNLDLKIEYFDLGLPHRDKTNDQVTIDAAHAIKEFNVGIKCATITPDEERVKEFKLKQMWKSPNGTIRNILNGTVFREPIVISNVPRLVPGWKKPIVVGRHAFGDQYKCTDFVAPGPGKFNMTFTPADGGKPQSWEVYDYKGAGVGLAMYNTDESIYAFAHSCLSFALTKNQDLYLSTKNTILKKYDGRFKDIFEEVYQNEYKSKYDAAGISYTHRLIDDMVAQALKSDGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLLAPDGKTVEAEAAHGTVTRHWREYQKGKATSTNPIASMYAWTRGLAHRGKLDGNQELVQFTHDWEAAVIETVEAGHMTKDLAICVHGTSNVTPDQYLTTEPFMDEV 414          
BLAST of EWM29773.1 vs. NCBI_GenBank
Match: gi|566012849|gb|ETI35760.1| (isocitrate dehydrogenase, NADP-dependent [Phytophthora parasitica P1569] >gi|567950264|gb|ETK75981.1| isocitrate dehydrogenase, NADP-dependent [Phytophthora parasitica] >gi|567978944|gb|ETL29429.1| isocitrate dehydrogenase, NADP-dependent [Phytophthora parasitica] >gi|568008438|gb|ETL82657.1| isocitrate dehydrogenase, NADP-dependent [Phytophthora parasitica] >gi|568038363|gb|ETM35896.1| isocitrate dehydrogenase, NADP-dependent [Phytophthora parasitica] >gi|570940298|gb|ETP05555.1| isocitrate dehydrogenase, NADP-dependent [Phytophthora parasitica CJ01A1] >gi|570970568|gb|ETP33687.1| isocitrate dehydrogenase, NADP-dependent [Phytophthora parasitica P10297])

HSP 1 Score: 671.003 bits (1730), Expect = 0.000e+0
Identity = 312/409 (76.28%), Postives = 356/409 (87.04%), Query Frame = 0
Query:   37 RTAAVGAKIKVENPVVDLDGDEMTRVIWKQIKDKLILPYLDLKIEYYDLGLPNRDKTNDQVTVDAANAIKKFNVGIKCATITPDEQRVEEFKLKEMWRSPNGTIRNILNGTVFREPIVISNIPRIIPGWVKPIVVGRHAFGDQYRATDFVVDKPGKFEMTFTSTDGTEKKTWNVFDFKGAGVGMAMYNTDESIRGFAHSCFAYALMKGWPLFLSTKNTILKKYDGRFKDIFEEIYEKEYKAQYEAMGITYTHRLIDDMVAQVLKSEGGVVWACKNYDGDVQSDIVAQGYGSLGLMTSVLITPDGKTVESEAAHGTVTRHWREYQKGKPTSTNPIASIFAWTRGLQHRAKLDNNPILTKFSLDMEAAVIKTVEKGFMTKDLAICVHGWTVSPDKYLTTDAFLDKVKLTYE 445
            R  A   KIKV  P+V+LDGDEMTRVIW QIKDK I PYLDL IEY+DLGLP+RD TNDQVT+DAA+AI++ NVGIKCATITPDEQRVEEFKLK+MWRSPNGTIRNILNGTVFREPIVISN+PR++PGW KPIVVGRHAFGDQY++TDF+   PGKFE+ +T  DG +K+T+ V+DFKG GVG+AMYNTDESI GFA SC ++AL K   L+LSTKNTILKKYDGRFKDIFEE+Y+ E+KA+Y+A GI+YTHRLIDDMVAQ LKS+GG VWACKNYDGDVQSDIVAQGYGSLGLMTSVL+ PDGKTVE+EAAHGTVTRHWR+YQ+GK TSTNPIASI+AWTRGL HR KLD N  L  FSL +E AVIKTVE G MTKDLAIC+HG  V+PD YL T+ F+DKVK T++
Sbjct:   15 RGFATSQKIKVHKPIVELDGDEMTRVIWSQIKDKYIHPYLDLDIEYFDLGLPHRDATNDQVTIDAAHAIQEHNVGIKCATITPDEQRVEEFKLKKMWRSPNGTIRNILNGTVFREPIVISNVPRLVPGWKKPIVVGRHAFGDQYKSTDFIAPGPGKFEVVYTPADGGDKQTFEVYDFKGPGVGLAMYNTDESIYGFAKSCLSFALSKNQDLYLSTKNTILKKYDGRFKDIFEEVYQSEFKAKYDAAGISYTHRLIDDMVAQALKSDGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLVAPDGKTVEAEAAHGTVTRHWRQYQQGKKTSTNPIASIYAWTRGLAHRGKLDGNQELVDFSLGLEDAVIKTVEAGHMTKDLAICIHGSNVTPDHYLYTEDFMDKVKDTFD 423          
BLAST of EWM29773.1 vs. NCBI_GenBank
Match: gi|1214705200|gb|OWZ16935.1| (Isocitrate dehydrogenase [Phytophthora megakarya])

HSP 1 Score: 670.618 bits (1729), Expect = 0.000e+0
Identity = 314/409 (76.77%), Postives = 356/409 (87.04%), Query Frame = 0
Query:   37 RTAAVGAKIKVENPVVDLDGDEMTRVIWKQIKDKLILPYLDLKIEYYDLGLPNRDKTNDQVTVDAANAIKKFNVGIKCATITPDEQRVEEFKLKEMWRSPNGTIRNILNGTVFREPIVISNIPRIIPGWVKPIVVGRHAFGDQYRATDFVVDKPGKFEMTFTSTDGTEKKTWNVFDFKGAGVGMAMYNTDESIRGFAHSCFAYALMKGWPLFLSTKNTILKKYDGRFKDIFEEIYEKEYKAQYEAMGITYTHRLIDDMVAQVLKSEGGVVWACKNYDGDVQSDIVAQGYGSLGLMTSVLITPDGKTVESEAAHGTVTRHWREYQKGKPTSTNPIASIFAWTRGLQHRAKLDNNPILTKFSLDMEAAVIKTVEKGFMTKDLAICVHGWTVSPDKYLTTDAFLDKVKLTYE 445
            R  A   KIKV  P+V+LDGDEMTRVIW QIKDK I PYLDL IEY+DLGLP+RD TNDQVTVDAA+AI++ +VGIKCATITPDEQRVEEFKLK+MWRSPNGTIRNILNGTVFREPIVISN+PR++PGW KPIVVGRHAFGDQY++TDF+   PGKFE+ +T  DG EK+T+ V+DFKG GVG+AMYNTDESI GFA SC ++AL K   L+LSTKNTILKKYDGRFKDIFEE+Y+ E+KA+Y+A GI+YTHRLIDDMVAQ LKS+GG VWACKNYDGDVQSDIVAQGYGSLGLMTSVL+ PDGKTVE+EAAHGTVTRHWR+YQKG+ TSTNPIASI+AWTRGL HR KLD N  L  FSL +E AVIKTVE G MTKDLAICVHG  V+PD YL T+ F+DKVK T++
Sbjct:   15 RGFATSQKIKVHKPIVELDGDEMTRVIWSQIKDKYIHPYLDLDIEYFDLGLPHRDATNDQVTVDAAHAIQEHHVGIKCATITPDEQRVEEFKLKKMWRSPNGTIRNILNGTVFREPIVISNVPRLVPGWKKPIVVGRHAFGDQYKSTDFIAPGPGKFEVVYTPNDGGEKQTFEVYDFKGPGVGLAMYNTDESIYGFAKSCLSFALSKNQDLYLSTKNTILKKYDGRFKDIFEEVYQSEFKAKYDAAGISYTHRLIDDMVAQALKSDGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLVAPDGKTVEAEAAHGTVTRHWRQYQKGEKTSTNPIASIYAWTRGLAHRGKLDGNQELIDFSLGLENAVIKTVEAGHMTKDLAICVHGSNVTPDHYLFTEDFMDKVKDTFD 423          
BLAST of EWM29773.1 vs. NCBI_GenBank
Match: gi|695395422|ref|XP_009521158.1| (hypothetical protein PHYSODRAFT_354100 [Phytophthora sojae] >gi|348686055|gb|EGZ25870.1| hypothetical protein PHYSODRAFT_354100 [Phytophthora sojae])

HSP 1 Score: 670.233 bits (1728), Expect = 0.000e+0
Identity = 312/409 (76.28%), Postives = 355/409 (86.80%), Query Frame = 0
Query:   37 RTAAVGAKIKVENPVVDLDGDEMTRVIWKQIKDKLILPYLDLKIEYYDLGLPNRDKTNDQVTVDAANAIKKFNVGIKCATITPDEQRVEEFKLKEMWRSPNGTIRNILNGTVFREPIVISNIPRIIPGWVKPIVVGRHAFGDQYRATDFVVDKPGKFEMTFTSTDGTEKKTWNVFDFKGAGVGMAMYNTDESIRGFAHSCFAYALMKGWPLFLSTKNTILKKYDGRFKDIFEEIYEKEYKAQYEAMGITYTHRLIDDMVAQVLKSEGGVVWACKNYDGDVQSDIVAQGYGSLGLMTSVLITPDGKTVESEAAHGTVTRHWREYQKGKPTSTNPIASIFAWTRGLQHRAKLDNNPILTKFSLDMEAAVIKTVEKGFMTKDLAICVHGWTVSPDKYLTTDAFLDKVKLTYE 445
            R  A   KIKV  P+V+LDGDEMTRVIW QIKDK I PYLDL IEY+DLGLP+RD TNDQVT+DAA+AI++ +VGIKCATITPDEQRVEEFKLK+MWRSPNGTIRNILNGTVFREPIVISN+PR++PGW KPIVVGRHAFGDQY++TDF+   PGKFE+ +T  DG+EK T  V+DFKG GVG+AMYNTDESI GFA SC ++AL K   L+LSTKNTILKKYDGRFKDIFEE+Y+ E+KA+Y+A GI+YTHRLIDDMVAQ LKS+GG VWACKNYDGDVQSDIVAQGYGSLGLMTSVL+ PDGKTVE+EAAHGTVTRHWR+YQ+GK TSTNPIASI+AWTRGL HR KLD N  L  FSL +E AVIKTVE G MTKDLAIC+HG  V+PD YL T+ F+DKVK T++
Sbjct:   15 RGFATSQKIKVHKPIVELDGDEMTRVIWSQIKDKYIHPYLDLDIEYFDLGLPHRDATNDQVTIDAAHAIQEHHVGIKCATITPDEQRVEEFKLKKMWRSPNGTIRNILNGTVFREPIVISNVPRLVPGWKKPIVVGRHAFGDQYKSTDFIAPGPGKFEVVYTPADGSEKTTLEVYDFKGPGVGLAMYNTDESIYGFAKSCLSFALSKNQDLYLSTKNTILKKYDGRFKDIFEEVYQNEFKAKYDAAGISYTHRLIDDMVAQALKSDGGFVWACKNYDGDVQSDIVAQGYGSLGLMTSVLVAPDGKTVEAEAAHGTVTRHWRQYQQGKKTSTNPIASIYAWTRGLAHRGKLDGNQELIDFSLGLEDAVIKTVEAGHMTKDLAICIHGSNVTPDHYLYTEDFMDKVKETFD 423          
The following BLAST results are available for this feature:
BLAST of EWM29773.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112353|gb|EWM29773.1|0.000e+0100.00isocitrate dehydrogenase [Nannochloropsis gaditana... [more]
gi|298712975|emb|CBJ26877.1|0.000e+073.27conserved unknown protein [Ectocarpus siliculosus][more]
gi|669153052|ref|XP_008612088.1|0.000e+076.87isocitrate dehydrogenase [NADP], mitochondrial [Sa... [more]
gi|1173947708|gb|OQR95917.1|0.000e+076.39isocitrate dehydrogenase, mitochondrial precursor ... [more]
gi|570316501|gb|ETO64449.1|0.000e+076.28isocitrate dehydrogenase, NADP-dependent [Phytopht... [more]
gi|675175213|ref|XP_008896491.1|0.000e+076.28isocitrate dehydrogenase, NADP-dependent [Phytopht... [more]
gi|673023890|ref|XP_008865906.1|0.000e+076.51isocitrate dehydrogenase, NADP-dependent [Aphanomy... [more]
gi|566012849|gb|ETI35760.1|0.000e+076.28isocitrate dehydrogenase, NADP-dependent [Phytopht... [more]
gi|1214705200|gb|OWZ16935.1|0.000e+076.77Isocitrate dehydrogenase [Phytophthora megakarya][more]
gi|695395422|ref|XP_009521158.1|0.000e+076.28hypothetical protein PHYSODRAFT_354100 [Phytophtho... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna939rna939Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications