EWM21286.1, cds9386 (CDS) Nannochloropsis gaditana

Overview
NameEWM21286.1
Unique Namecds9386
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:215577..216062 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21286.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100468g1.9411.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:215577..216062 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM21286.1 vs. NCBI_GenBank
Match: gi|585101450|gb|EWM21286.1| (hypothetical protein Naga_100468g1 [Nannochloropsis gaditana])

HSP 1 Score: 310.071 bits (793), Expect = 1.258e-106
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0 
Query:    1 MEHPVQGLASRRPRTPSFVRFPCPFNMPAQDTSPPAPARPSSPPTTPPSSSPSSPSSPPSTLPSFHVWRQHPTSLPRALFLDNRDKASTFAFDFLNWLRDESALLLNARAATAAAVALAASMATAASGAKDAAIDVLPSASNPPQTRSTTATTRHVLGRRK 161
            MEHPVQGLASRRPRTPSFVRFPCPFNMPAQDTSPPAPARPSSPPTTPPSSSPSSPSSPPSTLPSFHVWRQHPTSLPRALFLDNRDKASTFAFDFLNWLRDESALLLNARAATAAAVALAASMATAASGAKDAAIDVLPSASNPPQTRSTTATTRHVLGRRK
Sbjct:    1 MEHPVQGLASRRPRTPSFVRFPCPFNMPAQDTSPPAPARPSSPPTTPPSSSPSSPSSPPSTLPSFHVWRQHPTSLPRALFLDNRDKASTFAFDFLNWLRDESALLLNARAATAAAVALAASMATAASGAKDAAIDVLPSASNPPQTRSTTATTRHVLGRRK 161
The following BLAST results are available for this feature:
BLAST of EWM21286.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101450|gb|EWM21286.1|1.258e-106100.00hypothetical protein Naga_100468g1 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9416rna9416Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications