EWM21288.1, cds9385 (CDS) Nannochloropsis gaditana

Overview
NameEWM21288.1
Unique Namecds9385
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:213422..215341 -

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Properties
Property NameValue
Protein idEWM21288.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101674g1.1602.mrna
GbkeyCDS
End range.
End range215341
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:213422..215341 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21288.1 vs. NCBI_GenBank
Match: gi|585101453|gb|EWM21288.1| (hypothetical protein Naga_101674g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 1194.49 bits (3089), Expect = 0.000e+0
Identity = 639/639 (100.00%), Postives = 639/639 (100.00%), Query Frame = 0 
Query:    1 CASIRPPPPPAPSFPPLDPAPRHLFPEEEEVGGGEEEVGQRKGGGHKEGSGPRTQDASLPRAWAGPQKLPEASLPSSSPIRAGRGTSRRRIRPTPLSTLASSSSSSSTSSSSFPSNSIPQPYAAALVRGRGDGDLTREPSAPPLSRPPPRTARLLPPPPSPSINSFSSPPIAPRHDTLSADKFPAPAASSSPFLTPVKAPDPVPPSHLLPPPPPPPPPPPSSSSSSSSSSLPSTLTFSLPPSCSLPGSAAGTSPSLPLALPPSLPPPSSSRLLLVASVYASLLSLRLAPSLTTELHLLFRLLTVHPALLLRPPALPPSLPPFLTSGHACNLLAAHTLALLPHLLSSLPPSLLSLLLHVPALHDHVPHALPSLTRLPHSSHRPGPTSLALLPHHRDADGKGRRWGGEVALPFVEEKDGRQLYAGSGWGQEVFNRQETARDLFLNLFREWEEVRTRELDLRAVERWVGKEMPRRAREVLTGLDTWSLGWFAGVWVALLVKVGAGGEGREGGGGGREEEVLARALGAKGGREGGGGEGGQPRGGGRGGSAATSASCSPSEVQRTVLPSSLKLHLLHRRLTAPSDTSFASFGREISHRSLPLPPSSSPSPAPRRPSPRPSLPPALPSPRPLLSGAPTSFSTIS 639
            CASIRPPPPPAPSFPPLDPAPRHLFPEEEEVGGGEEEVGQRKGGGHKEGSGPRTQDASLPRAWAGPQKLPEASLPSSSPIRAGRGTSRRRIRPTPLSTLASSSSSSSTSSSSFPSNSIPQPYAAALVRGRGDGDLTREPSAPPLSRPPPRTARLLPPPPSPSINSFSSPPIAPRHDTLSADKFPAPAASSSPFLTPVKAPDPVPPSHLLPPPPPPPPPPPSSSSSSSSSSLPSTLTFSLPPSCSLPGSAAGTSPSLPLALPPSLPPPSSSRLLLVASVYASLLSLRLAPSLTTELHLLFRLLTVHPALLLRPPALPPSLPPFLTSGHACNLLAAHTLALLPHLLSSLPPSLLSLLLHVPALHDHVPHALPSLTRLPHSSHRPGPTSLALLPHHRDADGKGRRWGGEVALPFVEEKDGRQLYAGSGWGQEVFNRQETARDLFLNLFREWEEVRTRELDLRAVERWVGKEMPRRAREVLTGLDTWSLGWFAGVWVALLVKVGAGGEGREGGGGGREEEVLARALGAKGGREGGGGEGGQPRGGGRGGSAATSASCSPSEVQRTVLPSSLKLHLLHRRLTAPSDTSFASFGREISHRSLPLPPSSSPSPAPRRPSPRPSLPPALPSPRPLLSGAPTSFSTIS
Sbjct:    1 CASIRPPPPPAPSFPPLDPAPRHLFPEEEEVGGGEEEVGQRKGGGHKEGSGPRTQDASLPRAWAGPQKLPEASLPSSSPIRAGRGTSRRRIRPTPLSTLASSSSSSSTSSSSFPSNSIPQPYAAALVRGRGDGDLTREPSAPPLSRPPPRTARLLPPPPSPSINSFSSPPIAPRHDTLSADKFPAPAASSSPFLTPVKAPDPVPPSHLLPPPPPPPPPPPSSSSSSSSSSLPSTLTFSLPPSCSLPGSAAGTSPSLPLALPPSLPPPSSSRLLLVASVYASLLSLRLAPSLTTELHLLFRLLTVHPALLLRPPALPPSLPPFLTSGHACNLLAAHTLALLPHLLSSLPPSLLSLLLHVPALHDHVPHALPSLTRLPHSSHRPGPTSLALLPHHRDADGKGRRWGGEVALPFVEEKDGRQLYAGSGWGQEVFNRQETARDLFLNLFREWEEVRTRELDLRAVERWVGKEMPRRAREVLTGLDTWSLGWFAGVWVALLVKVGAGGEGREGGGGGREEEVLARALGAKGGREGGGGEGGQPRGGGRGGSAATSASCSPSEVQRTVLPSSLKLHLLHRRLTAPSDTSFASFGREISHRSLPLPPSSSPSPAPRRPSPRPSLPPALPSPRPLLSGAPTSFSTIS 639
The following BLAST results are available for this feature:
BLAST of EWM21288.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101453|gb|EWM21288.1|0.000e+0100.00hypothetical protein Naga_101674g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9415rna9415Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications