EWM29730.1, cds938 (CDS) Nannochloropsis gaditana

Overview
NameEWM29730.1
Unique Namecds938
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:774025..774399 -

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Properties
Property NameValue
Protein idEWM29730.1
ProductProtein of unknown function DUF1168
Orig transcript idgnl|cribi|Naga_100022g52.829.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:774025..774399 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009548DUF1168
Homology
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BLAST of EWM29730.1 vs. NCBI_GenBank
Match: gi|585112310|gb|EWM29730.1| (Protein of unknown function DUF1168 [Nannochloropsis gaditana])

HSP 1 Score: 247.669 bits (631), Expect = 4.418e-83
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0 
Query:    1 MARLAEMEEKATAEEEQKIYEESMERKRKESEERTRKLAEKRRRRRLAKKQRRGHGEVFSSNGRDEDGSMDEEDKDLSETTGKKQCVSENTLCMPIVQIKDDGNFMQMMLALEKDRRGGQTRNT 124
            MARLAEMEEKATAEEEQKIYEESMERKRKESEERTRKLAEKRRRRRLAKKQRRGHGEVFSSNGRDEDGSMDEEDKDLSETTGKKQCVSENTLCMPIVQIKDDGNFMQMMLALEKDRRGGQTRNT
Sbjct:    1 MARLAEMEEKATAEEEQKIYEESMERKRKESEERTRKLAEKRRRRRLAKKQRRGHGEVFSSNGRDEDGSMDEEDKDLSETTGKKQCVSENTLCMPIVQIKDDGNFMQMMLALEKDRRGGQTRNT 124
The following BLAST results are available for this feature:
BLAST of EWM29730.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112310|gb|EWM29730.1|4.418e-83100.00Protein of unknown function DUF1168 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna938rna938Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications