EWM21309.1, cds9365 (CDS) Nannochloropsis gaditana

Overview
NameEWM21309.1
Unique Namecds9365
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:163396..164712 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21309.1
Productbeta- -galactosyltransferase 3
Orig transcript idgnl|cribi|Naga_100535g2.6006.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:163396..164712 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0016757transferase activity, transferring glycosyl groups
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
IPR027791Galactosyl_T_C
IPR027995Galactosyl_T_N
IPR003859Galactosyl_T
Homology
BLAST of EWM21309.1 vs. NCBI_GenBank
Match: gi|585101489|gb|EWM21309.1| (beta- -galactosyltransferase 3 [Nannochloropsis gaditana])

HSP 1 Score: 872.848 bits (2254), Expect = 0.000e+0
Identity = 438/438 (100.00%), Postives = 438/438 (100.00%), Query Frame = 0
Query:    1 MPAPVEPRPPCASDTDTGQNRQPQEQQPQSSLPGTFPTLSGPDATSNSIPGGGNSEGSCPGPSPSVTKDVAETALREDRGNGSERQERATSILIVPYRDLYPEQERARHLQRFLREMPALLTAFGDPARRKTGGGGGEGVGEQREGVPEGKESEGKGRGQKEEEGEGKEGSGSPGAPLYHIYIVEQSKDGRKFNRGKLLNIGFDVALKDGEGTGEGGKEGGRAAASVFIFHDVDLLPSRELVPLYLTRPSRPLHIARAWGRYSGNPRYLGGAIAFNATDFQKINGFPNTFWGWGGEDDEMRKRVEQVGLEVGAPAAEEGGRMEDMEGVSLEEKLQALRRNREWKCNVKWEALGEHAETWRQNGLKDLRYEVMGREELEGEVGGGGGRITKLTVDVRENGHWTDTVVEIEGPAGGGGKGGKRGREGERKGPGGRGRWRR 438
            MPAPVEPRPPCASDTDTGQNRQPQEQQPQSSLPGTFPTLSGPDATSNSIPGGGNSEGSCPGPSPSVTKDVAETALREDRGNGSERQERATSILIVPYRDLYPEQERARHLQRFLREMPALLTAFGDPARRKTGGGGGEGVGEQREGVPEGKESEGKGRGQKEEEGEGKEGSGSPGAPLYHIYIVEQSKDGRKFNRGKLLNIGFDVALKDGEGTGEGGKEGGRAAASVFIFHDVDLLPSRELVPLYLTRPSRPLHIARAWGRYSGNPRYLGGAIAFNATDFQKINGFPNTFWGWGGEDDEMRKRVEQVGLEVGAPAAEEGGRMEDMEGVSLEEKLQALRRNREWKCNVKWEALGEHAETWRQNGLKDLRYEVMGREELEGEVGGGGGRITKLTVDVRENGHWTDTVVEIEGPAGGGGKGGKRGREGERKGPGGRGRWRR
Sbjct:    1 MPAPVEPRPPCASDTDTGQNRQPQEQQPQSSLPGTFPTLSGPDATSNSIPGGGNSEGSCPGPSPSVTKDVAETALREDRGNGSERQERATSILIVPYRDLYPEQERARHLQRFLREMPALLTAFGDPARRKTGGGGGEGVGEQREGVPEGKESEGKGRGQKEEEGEGKEGSGSPGAPLYHIYIVEQSKDGRKFNRGKLLNIGFDVALKDGEGTGEGGKEGGRAAASVFIFHDVDLLPSRELVPLYLTRPSRPLHIARAWGRYSGNPRYLGGAIAFNATDFQKINGFPNTFWGWGGEDDEMRKRVEQVGLEVGAPAAEEGGRMEDMEGVSLEEKLQALRRNREWKCNVKWEALGEHAETWRQNGLKDLRYEVMGREELEGEVGGGGGRITKLTVDVRENGHWTDTVVEIEGPAGGGGKGGKRGREGERKGPGGRGRWRR 438          
BLAST of EWM21309.1 vs. NCBI_GenBank
Match: gi|1210517235|dbj|GAX23870.1| (beta-1,4-galactosyltransferase 4 [Fistulifera solaris])

HSP 1 Score: 273.092 bits (697), Expect = 6.453e-85
Identity = 144/335 (42.99%), Postives = 191/335 (57.01%), Query Frame = 0
Query:   76 REDRGNGSERQERATSILIVPYRDLYPEQERARHLQRFLREMPALLTAFGDPARRKTGGGGGEGVGEQREGVPEGKESEGKGRGQKEEEGEGKEGSGSPGAPLYHIYIVEQSKDGRKFNRGKLLNIGFDVALKDGEGTGEGGKEGGRAAASVFIFHDVDLLPSRELVPLYLTRPSRPLHIARAWGRYSGNPRYLGGAIAFNATDFQKINGFPNTFWGWGGEDDEMRKRVEQVGLEVGAPAAEEGGRMEDMEGVSLEEKLQALRRNREWKCNVKWEALGEHAETWRQNGLKDLRYEVMGREELEGEVGGGGGRITKLTVDVRENG-HWTDTVVEIE 409
            R +  N  E  E ++  +IVP+RDL+  Q+RA HLQ+F+  M   L +                         +GK S                         YHIYI+EQS D RKFNRGKLLNIGFDVA K      +           VFIFHDVDLLP   L   Y   P RP+HIAR W RYS NP+Y GGA++F+++D+++ING+PN +WGWGGEDDEM++R+E++G+   AP     G ++D+E ++L EKL  LR N+ WK NVKWE   EH +TW+ NGL DL+Y V+   ELE    GG    +K+TVDV+ NG HWT+  V ++
Sbjct:   80 RSESDNILEDLEASSVAIIVPFRDLHAAQKRAAHLQQFIPHMVQFLGSL----------------------TKDGKISN------------------------YHIYIIEQSDDQRKFNRGKLLNIGFDVARKAAARNHD-----------VFIFHDVDLLPDAALGDWYAKFPKRPIHIARVWKRYSNNPKYFGGAVSFSSSDYKRINGYPNNYWGWGGEDDEMQRRLERLGITFEAPTR---GSLKDLEDMTLTEKLDFLRSNKAWKNNVKWELNDEHEKTWKTNGLADLKYSVLKTTELE----GGNNHASKITVDVKLNGSHWTNDKVSVD 350          
BLAST of EWM21309.1 vs. NCBI_GenBank
Match: gi|397610975|gb|EJK61110.1| (hypothetical protein THAOC_18453 [Thalassiosira oceanica])

HSP 1 Score: 271.552 bits (693), Expect = 2.069e-84
Identity = 148/346 (42.77%), Postives = 200/346 (57.80%), Query Frame = 0
Query:   62 PSPSVTKDVAETALREDRGNGSERQERATSI-LIVPYRDLYPEQERARHLQRFLREMPALLTAFGDPARRKTGGGGGEGVGEQREGVPEGKESEGKGRGQKEEEGEGKEGSGSPGAPLYHIYIVEQSKDGRKFNRGKLLNIGFDVALKDGEGTGEGGKEGGRAAASVFIFHDVDLLPSRELVPLYLTRPSRPLHIARAWGRYSGN-PRYLGGAIAFNATDFQKINGFPNTFWGWGGEDDEMRKRVEQVGLEVGAPAAEEGGRMEDMEGVSLEEKLQALRRNREWKCNVKWEALGEHAETWRQNGLKDLRYEVMGREEL-EGEVGGGGGRITKLTVDVRENG-HWTD 403
            P+P   KD   T  R      ++RQ+   S+ +IVPYRDL+P Q RARHLQ+F+  M   L+                      E V     S+                        YHIYI+EQS DGRKFNRGKLLNIGFD ++K  E      K   R   ++FIFHDVDLLP  +L   Y   P++P HIAR W RY+ N  +Y GG ++F+  D ++ING+PNTFWGWGGEDDEM+KR+E +G+   AP +   G + D+E + ++ K++ LR N++WKC VKWEAL EH  TW+ NGL DL+Y++ G ++L + +V G G ++T L VDV  NG HW +
Sbjct:   41 PTPQEAKDPHGTKERLRNEQHAKRQKMLNSVAIIVPYRDLHPTQNRARHLQQFVPHMKRFLS----------------------ELVSNNAISD------------------------YHIYIIEQSDDGRKFNRGKLLNIGFDYSVKRSE------KHPPRH--NIFIFHDVDLLPQNDLAEWYGKYPTKPTHIARVWSRYAANNSKYFGGVVSFSEEDMKRINGYPNTFWGWGGEDDEMQKRLETLGITWVAPPS---GTIVDLEQMDIDTKMKFLRENKQWKCMVKWEALEEHESTWQSNGLSDLKYDIKGVKKLDQDDVDGAGSKVTLLNVDVMLNGSHWAN 329          
BLAST of EWM21309.1 vs. NCBI_GenBank
Match: gi|1210529525|dbj|GAX11867.1| (beta-1,4-galactosyltransferase 4 [Fistulifera solaris])

HSP 1 Score: 269.626 bits (688), Expect = 1.595e-83
Identity = 138/330 (41.82%), Postives = 192/330 (58.18%), Query Frame = 0
Query:   81 NGSERQERATSILIVPYRDLYPEQERARHLQRFLREMPALLTAFGDPARRKTGGGGGEGVGEQREGVPEGKESEGKGRGQKEEEGEGKEGSGSPGAPLYHIYIVEQSKDGRKFNRGKLLNIGFDVALKDGEGTGEGGKEGGRAAASVFIFHDVDLLPSRELVPLYLTRPSRPLHIARAWGRYSGNPRYLGGAIAFNATDFQKINGFPNTFWGWGGEDDEMRKRVEQVGLEVGAPAAEEGGRMEDMEGVSLEEKLQALRRNREWKCNVKWEALGEHAETWRQNGLKDLRYEVMGREELEGEVGGGGGRITKLTVDVRENG-HWTDTVVEIE 409
            N  E  + ++  +IVP+RDL+  Q+RA HLQ+F+  M   L                                     G  +++G+            YHIYI+EQS+D RKFNRGKLLNIGFDVA           ++       VF+FHDVDLLP  +L   Y   P RP+HIAR W RYS NP+Y GGA++F+++D+++ING+PN +WGWGGEDDEM++R+E++G+   AP     G ++D+E ++L EKL  LR N+ WK NVKWE   EH +TW+ NGL DL+Y V+   EL+    GG    +K+TVDV+ NG HWT+  V ++
Sbjct:   90 NLLEDLDTSSVAIIVPFRDLHAAQKRAAHLQQFIPHMVQFL-------------------------------------GNLKKDGKISN---------YHIYIIEQSEDQRKFNRGKLLNIGFDVA-----------RKAAARKHDVFVFHDVDLLPDADLGDWYAKFPKRPIHIARVWKRYSNNPKYFGGAVSFSSSDYKRINGYPNNYWGWGGEDDEMQRRLERLGITFEAPTR---GSLKDLEDMTLTEKLDFLRSNKAWKNNVKWELNDEHEKTWKTNGLADLKYSVLKTTELD----GGNNHASKITVDVKLNGNHWTNDKVSVD 355          
BLAST of EWM21309.1 vs. NCBI_GenBank
Match: gi|219119328|ref|XP_002180427.1| (galactosyl transferase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407900|gb|EEC47835.1| galactosyl transferase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 268.47 bits (685), Expect = 5.300e-83
Identity = 141/326 (43.25%), Postives = 191/326 (58.59%), Query Frame = 0
Query:   89 ATSI-LIVPYRDLYPEQERARHLQRFLREMPALLTAFGDPARRKTGGGGGEGVGEQREGVPEGKESEGKGRGQKEEEGEGKEGSGSPGAPLYHIYIVEQSKDGRKFNRGKLLNIGFDVALKDGEGTGEGGKEGGRAAASVFIFHDVDLLPSRELVPLYLTRPSRPLHIARAWGRYSGNPRYLGGAIAFNATDFQKINGFPNTFWGWGGEDDEMRKRVEQVGLEVGAPAAEEGGRMEDMEGVSLEEKLQALRRNREWKCNVKWEALGEHAETWRQNGLKDLRYEVMGREELEGEVGGGGGRITKLTVDVRENG-HWTD--TVVEIEG 410
            +TS+ +IVPYRD++  Q+RA HL +F+  M                             +  GK S+                        YH YI+EQS DGRKFNRGKLLNIGFD+A K             + +  VFIFHDVDLLP  +L   Y   P  P+HIAR WGRYS NP+Y GG ++F+++D+++ING+PNTFWGWGGEDDEM+KR+E++G+   +P     G + D+E ++L EKL  LR NREWKC VKWEAL EH +TW+ NG+ DL+Y+V+ +  L+       GR TK TVDV+ NG HW +  + ++ +G
Sbjct:  102 STSVAVIVPYRDIHSAQQRAAHLAKFVPHMQRFFNRL----------------------LKSGKVSD------------------------YHFYIIEQSDDGRKFNRGKLLNIGFDLARK------------SKRSHDVFIFHDVDLLPQDDLGSWYAKFPKSPIHIARVWGRYSNNPKYFGGVVSFSSSDYKRINGYPNTFWGWGGEDDEMQKRLERLGIRFESPPK---GTLVDLENMTLPEKLNFLRANREWKCMVKWEALEEHEKTWKINGMADLKYKVLEQTSLD-----ETGRATKATVDVQLNGDHWANEKSAIDFQG 361          
BLAST of EWM21309.1 vs. NCBI_GenBank
Match: gi|299117539|emb|CBN75383.1| (Beta-1,4-galactosyltransferase, family GT7 [Ectocarpus siliculosus])

HSP 1 Score: 266.544 bits (680), Expect = 1.809e-82
Identity = 146/315 (46.35%), Postives = 178/315 (56.51%), Query Frame = 0
Query:   93 LIVPYRDLYPEQERARHLQRFLREMPALLTAFGDPARRKTGGGGGEGVGEQREGVPEGKESEGKGRGQKEEEGEGKEGSGSPGAPLYHIYIVEQSKD-GRKFNRGKLLNIGFDVALKDGEGTGEGGKEGGRAAASVFIFHDVDLLPSRELVPLYLTRPSRPLHIARAWGRYSGNPRYLGGAIAFNATDFQKINGFPNTFWGWGGEDDEMRKRVEQVGLEVGAPAAEEGGRMEDMEGVSLEEKLQALRRNREWKCNVKWEALGEHAETWRQNGLKDLRYEVMGREELEGEVGGGGGRITKLTVDVRENGHWTDTVV 406
            ++VPYRDL P Q R+ HL++F+  M   L        R  GG GGE                                        + +Y+VEQS D G KFNRGKLLNIGFD+A K+G              A VF+ HDVDLLPS EL   Y T P RP+H+AR W +YS NP+Y GG +AFN  DF+ INGFPNTFWGWGGEDDEM  R+ +  LE   P   E G  +D+EG+ L  KL  LR+N +WKC VK EAL EH+ TWRQNGL DL+Y+V+GR  L       G    K+TV+V  NGHWTDT+ 
Sbjct:   88 VVVPYRDLDPAQRRSAHLEQFVPYMEDFL-------ERAVGGAGGE----------------------------------------FRVYVVEQSTDDGLKFNRGKLLNIGFDLARKEG--------------AQVFLLHDVDLLPSNELARWYATVPERPVHVARVWKQYSNNPKYFGGVVAFNRKDFEAINGFPNTFWGWGGEDDEMYSRIVEARLE---PQKAEVGEFKDLEGLDLPTKLNLLRQNEQWKCQVKKEALEEHSNTWRQNGLADLKYKVLGRTSL-------GKGTEKITVEVGLNGHWTDTIT 331          
BLAST of EWM21309.1 vs. NCBI_GenBank
Match: gi|566013173|gb|ETI36084.1| (hypothetical protein, variant 1 [Phytophthora parasitica P1569] >gi|568008761|gb|ETL82976.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568038681|gb|ETM36202.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|570316857|gb|ETO64805.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976] >gi|570970896|gb|ETP34015.1| hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 226.483 bits (576), Expect = 7.275e-67
Identity = 133/365 (36.44%), Postives = 183/365 (50.14%), Query Frame = 0
Query:   57 GSCPGPS-PSVTKDVAETALRE------DRGNGSERQERATSILIVPYRDLYPEQERARHLQRFLREMPALLTAFGDPARRKTGGGGGEGVGEQREGVPEGKESEGKGRGQKEEEGEGKEGSGSPGAPLYHIYIVEQSKDGRKFNRGKLLNIGFDVALKDGEGTGEGGKEGGRAAASVFIFHDVDLLPSRELVPLYLTRPSR-PLHIARAWGRYSGNPRYLGGAIAFNATDFQKINGFPNTFWGWGGEDDEMRKRVEQVGLEVGAPAAEEGGRMEDMEGVSLEEKLQALRRNREWKCNVKWEALGEHAETWRQNGLKDLRYEVMGREELEGEVGGGGGRITKLTVDVRENGHWTDTVVEIEGPAG 413
             +CPG S P  T+    TA  E      D+ + S  Q+     ++VP+RD +P Q+R   L  F+  M   L       +R                                                +HI+I++QS DGRKFNRGKLLN GFD+A  D +               ++IFHDVDLLP  +L  LY T P+  P+HIAR W RY+ +  Y GG +AF    F K+NGFPN FWGWGGED+E+  RV +    + APA+   G + D+EG++LEEKL  LR ++  KC VK++ L EH  TW++NGLK+L YE +  E +           TK+TV +  NGHW+D+   +E P  
Sbjct:   25 AACPGQSEPFKTQCAITTAPEETEAPPQDKRSSSAMQDTTRVAVLVPFRDNHPAQKRQAQLDEFVPYMTEFL-------KRHCALKSAS----------------------------------------FHIFIIDQSLDGRKFNRGKLLNAGFDMARNDYD---------------LYIFHDVDLLPGDDLGELYTTIPTLGPMHIARVWDRYNESSTYFGGIVAFTFQQFIKVNGFPNNFWGWGGEDNELYSRVVRKKFSIQAPAS---GTIRDLEGLNLEEKLAVLRTSKV-KCTVKYDLLKEHHRTWKKNGLKNLHYEYVNAEAI-------NENCTKITVKLGPNGHWSDSRSSLELPTA 316          
BLAST of EWM21309.1 vs. NCBI_GenBank
Match: gi|675174653|ref|XP_008896211.1| (hypothetical protein PPTG_04136 [Phytophthora parasitica INRA-310] >gi|567950598|gb|ETK76307.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567979267|gb|ETL29749.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568103906|gb|ETN18563.1| hypothetical protein PPTG_04136 [Phytophthora parasitica INRA-310] >gi|570940638|gb|ETP05895.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 226.483 bits (576), Expect = 8.361e-67
Identity = 133/365 (36.44%), Postives = 183/365 (50.14%), Query Frame = 0
Query:   57 GSCPGPS-PSVTKDVAETALRE------DRGNGSERQERATSILIVPYRDLYPEQERARHLQRFLREMPALLTAFGDPARRKTGGGGGEGVGEQREGVPEGKESEGKGRGQKEEEGEGKEGSGSPGAPLYHIYIVEQSKDGRKFNRGKLLNIGFDVALKDGEGTGEGGKEGGRAAASVFIFHDVDLLPSRELVPLYLTRPSR-PLHIARAWGRYSGNPRYLGGAIAFNATDFQKINGFPNTFWGWGGEDDEMRKRVEQVGLEVGAPAAEEGGRMEDMEGVSLEEKLQALRRNREWKCNVKWEALGEHAETWRQNGLKDLRYEVMGREELEGEVGGGGGRITKLTVDVRENGHWTDTVVEIEGPAG 413
             +CPG S P  T+    TA  E      D+ + S  Q+     ++VP+RD +P Q+R   L  F+  M   L       +R                                                +HI+I++QS DGRKFNRGKLLN GFD+A  D +               ++IFHDVDLLP  +L  LY T P+  P+HIAR W RY+ +  Y GG +AF    F K+NGFPN FWGWGGED+E+  RV +    + APA+   G + D+EG++LEEKL  LR ++  KC VK++ L EH  TW++NGLK+L YE +  E +           TK+TV +  NGHW+D+   +E P  
Sbjct:   25 AACPGQSEPFKTQCAITTAPEETEAPPQDKRSSSAMQDTTRVAVLVPFRDNHPAQKRQAQLDEFVPYMTEFL-------KRHCALKSAS----------------------------------------FHIFIIDQSLDGRKFNRGKLLNAGFDMARNDYD---------------LYIFHDVDLLPGDDLGELYTTIPTLGPMHIARVWDRYNESSTYFGGIVAFTFQQFIKVNGFPNNFWGWGGEDNELYSRVVRKKFSIQAPAS---GTIRDLEGLNLEEKLAVLRTSKV-KCTVKYDLLKEHHRTWKKNGLKNLHYEYVNAEAI-------NENCTKITVKLGPNGHWSDSRSSLELPTA 316          
BLAST of EWM21309.1 vs. NCBI_GenBank
Match: gi|301112326|ref|XP_002905242.1| (Putative beta-1,4-galactosyltransferase [Phytophthora infestans T30-4] >gi|262095572|gb|EEY53624.1| Putative beta-1,4-galactosyltransferase [Phytophthora infestans T30-4])

HSP 1 Score: 218.779 bits (556), Expect = 1.335e-64
Identity = 126/329 (38.30%), Postives = 167/329 (50.76%), Query Frame = 0
Query:   86 QERATSILIVPYRDLYPEQERARHLQRFLREMPALLTAFGDPARRKTGGGGGEGVGEQREGVPEGKESEGKGRGQKEEEGEGKEGSGSPGAPLYHIYIVEQSKDGRKFNRGKLLNIGFDVALKDGEGTGEGGKEGGRAAASVFIFHDVDLLPSRELVPLYLTRPSR-PLHIARAWGRYSGNPRYLGGAIAFNATDFQKINGFPNTFWGWGGEDDEMRKRVEQVGLEVGAPAAEEGGRMEDMEGVSLEEKLQALRRNREWKCNVKWEALGEHAETWRQNGLKDLRYEVMGREELEGEVGGGGGRITKLTVDVRENGHWTDTVVEIEGPAG 413
            Q+     ++VP+RD +P Q+R  HL  F+  M   L       +R   G                                            +HI+I+EQS DGRKFNRGKLLN GFD+A  D +               V+IFHDVDLLP  +L  LY T PS  P+HIAR W RY+ +  Y GG +AF    F K+NGFPN FWGWGGED+E+  RV +  L + AP +   G + D+E ++LEEKL  LR ++  KC VK + L EH  TW++NGLK L YE +  E +           TK+TV +  NGHW+D+   +E P  
Sbjct:    2 QDSTRVAVLVPFRDSHPAQKRHAHLDEFVPFMTEFL-------KRNCAGKSAS----------------------------------------FHIFIIEQSLDGRKFNRGKLLNAGFDMARNDYD---------------VYIFHDVDLLPGDDLGELYTTVPSLGPMHIARLWDRYNESSTYFGGIVAFTRQQFIKVNGFPNNFWGWGGEDNELYSRVVRKKLAIQAPTS---GTIRDLEDLNLEEKLTVLRTSKV-KCTVKRDLLKEHHRTWKKNGLKSLCYEYVNAEAI-------NENCTKITVKLGPNGHWSDSRSSLEHPIA 257          
BLAST of EWM21309.1 vs. NCBI_GenBank
Match: gi|970660157|gb|KUF97732.1| (putative short-chain type dehydrogenase/reductase y4lA [Phytophthora nicotianae])

HSP 1 Score: 217.624 bits (553), Expect = 2.236e-64
Identity = 109/236 (46.19%), Postives = 147/236 (62.29%), Query Frame = 0
Query:  179 YHIYIVEQSKDGRKFNRGKLLNIGFDVALKDGEGTGEGGKEGGRAAASVFIFHDVDLLPSRELVPLYLTRPSR-PLHIARAWGRYSGNPRYLGGAIAFNATDFQKINGFPNTFWGWGGEDDEMRKRVEQVGLEVGAPAAEEGGRMEDMEGVSLEEKLQALRRNREWKCNVKWEALGEHAETWRQNGLKDLRYEVMGREELEGEVGGGGGRITKLTVDVRENGHWTDTVVEIEGPAG 413
            +HI+I++QS DGRKFNRGKLLN GFD+A  D +               ++IFHDVDLLP  +L  LY T P+  P+HIAR W RY+ +  Y GG +AF    F K+NGFPN FWGWGGED+E+  RV +    + APA+   G + D+EG++LEEKL  LR ++  KC VK++ L EH  TW++NGLK+L YE +  E +           TK+TV +  NGHW+D+   +E P  
Sbjct:   31 FHIFIIDQSLDGRKFNRGKLLNAGFDMARNDYD---------------LYIFHDVDLLPGDDLGELYTTIPTLGPMHIARVWDRYNESSTYFGGIVAFTFQQFIKVNGFPNNFWGWGGEDNELYSRVVRKKFSIQAPAS---GTIRDLEGLNLEEKLAVLRTSKV-KCTVKYDLLKEHHRTWKKNGLKNLHYEYVNAEAI-------NENCTKITVKLGPNGHWSDSRSSLELPTA 240          
The following BLAST results are available for this feature:
BLAST of EWM21309.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101489|gb|EWM21309.1|0.000e+0100.00beta- -galactosyltransferase 3 [Nannochloropsis ga... [more]
gi|1210517235|dbj|GAX23870.1|6.453e-8542.99beta-1,4-galactosyltransferase 4 [Fistulifera sola... [more]
gi|397610975|gb|EJK61110.1|2.069e-8442.77hypothetical protein THAOC_18453 [Thalassiosira oc... [more]
gi|1210529525|dbj|GAX11867.1|1.595e-8341.82beta-1,4-galactosyltransferase 4 [Fistulifera sola... [more]
gi|219119328|ref|XP_002180427.1|5.300e-8343.25galactosyl transferase [Phaeodactylum tricornutum ... [more]
gi|299117539|emb|CBN75383.1|1.809e-8246.35Beta-1,4-galactosyltransferase, family GT7 [Ectoca... [more]
gi|566013173|gb|ETI36084.1|7.275e-6736.44hypothetical protein, variant 1 [Phytophthora para... [more]
gi|675174653|ref|XP_008896211.1|8.361e-6736.44hypothetical protein PPTG_04136 [Phytophthora para... [more]
gi|301112326|ref|XP_002905242.1|1.335e-6438.30Putative beta-1,4-galactosyltransferase [Phytophth... [more]
gi|970660157|gb|KUF97732.1|2.236e-6446.19putative short-chain type dehydrogenase/reductase ... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9395rna9395Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications