EWM21310.1, cds9358 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21310.1 vs. NCBI_GenBank
Match: gi|585101492|gb|EWM21310.1| (atp-dependent protease la [Nannochloropsis gaditana]) HSP 1 Score: 1368.21 bits (3540), Expect = 0.000e+0 Identity = 692/692 (100.00%), Postives = 692/692 (100.00%), Query Frame = 0
Query: 1 MPRRGLRSESGDGRREQVDGLEEESHRRIRSHSRIAGASRGVRRKANRQLSEEVSASEALPGWSLPPPSCLHRSARWHLLGPTSRSAKKPKRGPGAWRHTSGSQGSGLAYSPSSSSSGALGIQVSSRPGLALEGREEEGTGNDAARGAASRTRFAFAGDGEEEEEGEQEEDSGGGGGGERGGDGICDAQAVSINSGCLGGFPIGVGCAVSGEGGLAFAVQSEATSPGTGELILTGKIGKSMAESCMVALSWVKAKKRDLCLWMSLEGEDGEGSGCLVDLHRPDLDVHVNFPSCEAEKNGPSAGATVATSLVLMMTGAQLLPNIAISGEINLKGDLLPIGNVKEKVAAAARQGITHIVLSSANVKQFRRLPARIRNAVKALKANHIVEVLKHAVLPPGGRGYQARYEHRLREVAGLGLAASLACSHVKGRVQWVECCATTGRGEWHITGNVLEGTRGSVLVARTWVRRNAAAIVARLGGKTSVQVELCALHGLGPAWRLRGKETGAVGPALAAGTPSLPLEPSRRSNGKHPLSPSPGTLASGDPALLPPPQLDLHIHMPGTDVAKDVSINGAAAAVSMIAVMTGLAVRPGKPRDLYLPPLPRDRLVSPSLPALPPSLSRRCRSGRNHPVGRVLALGAGERGGGQHGHRREHLAACPAHGKARREGGGEKRVEKWGGQTSPEEMGGGGFSEGRR 692
MPRRGLRSESGDGRREQVDGLEEESHRRIRSHSRIAGASRGVRRKANRQLSEEVSASEALPGWSLPPPSCLHRSARWHLLGPTSRSAKKPKRGPGAWRHTSGSQGSGLAYSPSSSSSGALGIQVSSRPGLALEGREEEGTGNDAARGAASRTRFAFAGDGEEEEEGEQEEDSGGGGGGERGGDGICDAQAVSINSGCLGGFPIGVGCAVSGEGGLAFAVQSEATSPGTGELILTGKIGKSMAESCMVALSWVKAKKRDLCLWMSLEGEDGEGSGCLVDLHRPDLDVHVNFPSCEAEKNGPSAGATVATSLVLMMTGAQLLPNIAISGEINLKGDLLPIGNVKEKVAAAARQGITHIVLSSANVKQFRRLPARIRNAVKALKANHIVEVLKHAVLPPGGRGYQARYEHRLREVAGLGLAASLACSHVKGRVQWVECCATTGRGEWHITGNVLEGTRGSVLVARTWVRRNAAAIVARLGGKTSVQVELCALHGLGPAWRLRGKETGAVGPALAAGTPSLPLEPSRRSNGKHPLSPSPGTLASGDPALLPPPQLDLHIHMPGTDVAKDVSINGAAAAVSMIAVMTGLAVRPGKPRDLYLPPLPRDRLVSPSLPALPPSLSRRCRSGRNHPVGRVLALGAGERGGGQHGHRREHLAACPAHGKARREGGGEKRVEKWGGQTSPEEMGGGGFSEGRR
Sbjct: 1 MPRRGLRSESGDGRREQVDGLEEESHRRIRSHSRIAGASRGVRRKANRQLSEEVSASEALPGWSLPPPSCLHRSARWHLLGPTSRSAKKPKRGPGAWRHTSGSQGSGLAYSPSSSSSGALGIQVSSRPGLALEGREEEGTGNDAARGAASRTRFAFAGDGEEEEEGEQEEDSGGGGGGERGGDGICDAQAVSINSGCLGGFPIGVGCAVSGEGGLAFAVQSEATSPGTGELILTGKIGKSMAESCMVALSWVKAKKRDLCLWMSLEGEDGEGSGCLVDLHRPDLDVHVNFPSCEAEKNGPSAGATVATSLVLMMTGAQLLPNIAISGEINLKGDLLPIGNVKEKVAAAARQGITHIVLSSANVKQFRRLPARIRNAVKALKANHIVEVLKHAVLPPGGRGYQARYEHRLREVAGLGLAASLACSHVKGRVQWVECCATTGRGEWHITGNVLEGTRGSVLVARTWVRRNAAAIVARLGGKTSVQVELCALHGLGPAWRLRGKETGAVGPALAAGTPSLPLEPSRRSNGKHPLSPSPGTLASGDPALLPPPQLDLHIHMPGTDVAKDVSINGAAAAVSMIAVMTGLAVRPGKPRDLYLPPLPRDRLVSPSLPALPPSLSRRCRSGRNHPVGRVLALGAGERGGGQHGHRREHLAACPAHGKARREGGGEKRVEKWGGQTSPEEMGGGGFSEGRR 692
BLAST of EWM21310.1 vs. NCBI_GenBank
Match: gi|1054597625|ref|WP_066365875.1| (endopeptidase La [Bacillus fumarioli]) HSP 1 Score: 129.413 bits (324), Expect = 2.060e-27 Identity = 72/197 (36.55%), Postives = 112/197 (56.85%), Query Frame = 0
Query: 203 IGVGCAVSGEGGLAFAVQSEATSPGTGELILTGKIGKSMAESCMVALSWVKAKKRDLCLWMSLEGEDGEGSGCLVDLHRPDLDVHVNFPSCEAEKNGPSAGATVATSLVLMMTGAQLLPNIAISGEINLKGDLLPIGNVKEKVAAAARQGITHIVLSSANVKQFRRLPARIRNAVKALKANHIVEVLKHAVLPPGGR 399
+ G A + GG ++ + +PG G+L+LTGK+G M ES A S+V++K ++L G D H D+H++ P K+GPSAG T+AT+LV +TG + + ++GEI L+G +LPIG +KEK +A R G+T ++L N K +P +RN ++ + +H+ EVLKHA+L G R
Sbjct: 595 VATGLAYTTVGGDTLQIEV-SIAPGKGKLVLTGKLGDVMKESAQAAFSYVRSKTKEL--------------GIEEDFHEK-YDIHIHVPEGAVPKDGPSAGITIATALVSALTGKPIRREVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKVILPKENEKDIDDIPESVRNELEFVPVSHVDEVLKHALLEGGAR 775
BLAST of EWM21310.1 vs. NCBI_GenBank
Match: gi|874574474|gb|AKQ01587.1| (anti-sigma H sporulation factor LonB, ATP-dependent Lon protease [uncultured delta proteobacterium Rifle_16ft_4_minimus_1997]) HSP 1 Score: 119.398 bits (298), Expect = 2.949e-27 Identity = 66/169 (39.05%), Postives = 102/169 (60.36%), Query Frame = 0
Query: 226 PGTGELILTGKIGKSMAESCMVALSWVKAKKRDLCLWMSLEGEDGEGSGCLVDLHRPDLDVHVNFPSCEAEKNGPSAGATVATSLVLMMTGAQLLPNIAISGEINLKGDLLPIGNVKEKVAAAARQGITHIVLSSANVKQFRRLPARIRNAVKALKANHIVEVLKHAVL 394
PG G+LI+TGK+G M ES A+S+V+++ +L G D ++ +DVH++ P K+GPSAG T+ATSLV +T + P++A++GEI L+G++LPIG +KEKV AA R GI +++ + N K +P I V+ + H+ EVLK A++
Sbjct: 2 PGKGQLIITGKLGDVMQESAQAAMSYVRSRAEEL--------------GLERDFYQ-KVDVHIHVPEGAIPKDGPSAGITMATSLVSALTRTPVRPDLAMTGEITLRGNILPIGGLKEKVLAAHRGGIKTVLIPAENEKDIEEVPQTILKTVELVMVAHMDEVLKKALV 155
BLAST of EWM21310.1 vs. NCBI_GenBank
Match: gi|922864112|gb|KOO31430.1| (ATP-dependent protease la [Chrysochromulina sp. CCMP291]) HSP 1 Score: 127.102 bits (318), Expect = 3.654e-27 Identity = 74/202 (36.63%), Postives = 118/202 (58.42%), Query Frame = 0
Query: 203 IGVGCAVSGEGGLAFAVQSEATSPGTGELILTGKIGKSMAESCMVALSWVKAKKRDLCLWMSLEGEDGEGSGCLVDLHRPDLDVHVNFPSCEAEKNGPSAGATVATSLVLMMTGAQLLPNIAISGEINLKGDLLPIGNVKEKVAAAARQGITHIVLSSANVKQFRRLPARIRNAVKALKANHIVEVLKHAVLPPGGRGYQAR 404
I G A + GG V++E + G GE++LTG++G M ES M A SW++A +L L + E G SG + D+H++FP+ K+GPSAG T+ T++V ++TG ++ P++A++GE+ L+G +LP+G +KEKV AA R G+ ++L + N K R LP + + + I EVL A+LP + A+
Sbjct: 333 IVAGLAYTSVGGDLLYVEAEQMA-GRGEIVLTGQLGDVMKESAMAARSWIRAHAHELGL---VGAEPGAVSGGPLGHFLNSTDLHIHFPAGAVPKDGPSAGVTITTAIVSLLTGRKVRPDLAMTGEVTLRGLVLPVGGIKEKVIAAHRGGMRTVILPAKNEKDLRELPQTVLRDMTFILVREIREVLDAALLPADAKDSAAQ 530
BLAST of EWM21310.1 vs. NCBI_GenBank
Match: gi|1120966842|ref|WP_073475757.1| (endopeptidase La [Desulfatibacillum alkenivorans]) HSP 1 Score: 127.872 bits (320), Expect = 8.196e-27 Identity = 76/189 (40.21%), Postives = 115/189 (60.85%), Query Frame = 0
Query: 206 GCAVSGEGGLAFAVQSEATSPGTGELILTGKIGKSMAESCMVALSWVKAKKRDLCLWMSLEGEDGEGSGCLVDLHRPDLDVHVNFPSCEAEKNGPSAGATVATSLVLMMTGAQLLPNIAISGEINLKGDLLPIGNVKEKVAAAARQGITHIVLSSANVKQFRRLPARIRNAVKALKANHIVEVLKHAVL 394
G A + GG AV++ T PG GELI+TGK+G M ES A+S+V+++ LC+ D E H+ LD+H++ P K+GPSAG T+ TS+V ++TG ++ ++A++GEI L+G +LPIG +KEK+ AA R GI I++ N K +PAR+ AVK H+ +VL+HA++
Sbjct: 611 GLAWTQVGGEILAVET-VTMPGKGELIVTGKLGDVMKESARAAVSYVRSRTPRLCI-------DPE-------FHK-KLDIHIHIPEGAIPKDGPSAGITMCTSIVSVLTGRKVRRDLAMTGEITLRGRILPIGGLKEKILAAHRAGIKAILIPEENEKDLADIPARVLKAVKVTPVGHMDQVLEHALV 783
BLAST of EWM21310.1 vs. NCBI_GenBank
Match: gi|1110486842|emb|SHJ77186.1| (ATP-dependent proteinase. Serine peptidase. MEROPS family S16 [Desulfatibacillum alkenivorans DSM 16219]) HSP 1 Score: 127.487 bits (319), Expect = 8.264e-27 Identity = 76/189 (40.21%), Postives = 115/189 (60.85%), Query Frame = 0
Query: 206 GCAVSGEGGLAFAVQSEATSPGTGELILTGKIGKSMAESCMVALSWVKAKKRDLCLWMSLEGEDGEGSGCLVDLHRPDLDVHVNFPSCEAEKNGPSAGATVATSLVLMMTGAQLLPNIAISGEINLKGDLLPIGNVKEKVAAAARQGITHIVLSSANVKQFRRLPARIRNAVKALKANHIVEVLKHAVL 394
G A + GG AV++ T PG GELI+TGK+G M ES A+S+V+++ LC+ D E H+ LD+H++ P K+GPSAG T+ TS+V ++TG ++ ++A++GEI L+G +LPIG +KEK+ AA R GI I++ N K +PAR+ AVK H+ +VL+HA++
Sbjct: 593 GLAWTQVGGEILAVET-VTMPGKGELIVTGKLGDVMKESARAAVSYVRSRTPRLCI-------DPE-------FHK-KLDIHIHIPEGAIPKDGPSAGITMCTSIVSVLTGRKVRRDLAMTGEITLRGRILPIGGLKEKILAAHRAGIKAILIPEENEKDLADIPARVLKAVKVTPVGHMDQVLEHALV 765
BLAST of EWM21310.1 vs. NCBI_GenBank
Match: gi|501641672|ref|WP_012610595.1| (endopeptidase La [Desulfatibacillum alkenivorans] >gi|218760694|gb|ACL03160.1| ATP-dependent protease La [Desulfatibacillum alkenivorans AK-01]) HSP 1 Score: 127.487 bits (319), Expect = 9.609e-27 Identity = 76/189 (40.21%), Postives = 115/189 (60.85%), Query Frame = 0
Query: 206 GCAVSGEGGLAFAVQSEATSPGTGELILTGKIGKSMAESCMVALSWVKAKKRDLCLWMSLEGEDGEGSGCLVDLHRPDLDVHVNFPSCEAEKNGPSAGATVATSLVLMMTGAQLLPNIAISGEINLKGDLLPIGNVKEKVAAAARQGITHIVLSSANVKQFRRLPARIRNAVKALKANHIVEVLKHAVL 394
G A + GG AV++ T PG GELI+TGK+G M ES A+S+V+++ LC+ D E H+ LD+H++ P K+GPSAG T+ TS+V ++TG ++ ++A++GEI L+G +LPIG +KEK+ AA R GI I++ N K +PAR+ AVK H+ +VL+HA++
Sbjct: 611 GLAWTQVGGEILAVET-VTMPGKGELIVTGKLGDVMKESARAAVSYVRSRTPRLCI-------DPE-------FHK-KLDIHIHIPEGAIPKDGPSAGITMCTSIVSVLTGRKVHRDLAMTGEITLRGRILPIGGLKEKILAAHRAGIKAILIPEENEKDLADIPARVLKAVKVTPVGHMDQVLEHALV 783
BLAST of EWM21310.1 vs. NCBI_GenBank
Match: gi|403359469|gb|EJY79397.1| (ATP-dependent protease La (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 127.102 bits (318), Expect = 1.243e-26 Identity = 78/223 (34.98%), Postives = 125/223 (56.05%), Query Frame = 0
Query: 201 FPIGVGCAVSGEGGLAFAVQSEATSPGTGELILTGKIGKSMAESCMVALSWVKAKKRDLCLWMSLEG---EDGEGSGCLV------DLHRPDLDVHVNFPSCEAEKNGPSAGATVATSLVLMMTGAQLLPNIAISGEINLKGDLLPIGNVKEKVAAAARQGITHIVLSSANVKQFRRLPARIRNAVKALKANHIVEVLKHAVLPPGGRGY-----QARYEHRL 409
+ I G A + GG A +++ A PGTG+L LTGK+G M ES ALSW+K + ++ SL+ + + LV +L D+HV+FP+ K+GPSAG T+ T+LV ++T ++ + A++GEI+L+G +LP+G +KEK AA R GI +++L N K +P +R ++ A+ I EVL+ A+ Y Q+ ++H+L
Sbjct: 565 YLIFQGLAYTEVGGRALLIET-AKYPGTGQLNLTGKLGDVMKESVNTALSWIKTNAGRIGVYKSLKKLRVDVADDPNHLVKEDRNAELIFKQFDLHVHFPAAAVPKDGPSAGVTITTALVSLLTNRRVKSDFAMTGEISLQGLVLPVGGIKEKTIAAHRNGIKNVILPFKNKKDIDEIPTDVRKDIQIHFAHRIEEVLELALEKTIDHKYLKEESQSIFKHKL 786
BLAST of EWM21310.1 vs. NCBI_GenBank
Match: gi|604297678|gb|EYU17851.1| (hypothetical protein MIMGU_mgv1a0010892mg, partial [Erythranthe guttata]) HSP 1 Score: 117.857 bits (294), Expect = 1.561e-26 Identity = 69/191 (36.13%), Postives = 111/191 (58.12%), Query Frame = 0
Query: 203 IGVGCAVSGEGGLAFAVQSEATSPGTGELILTGKIGKSMAESCMVALSWVKAKKRDLCLWMSLEGEDGEGSGCLVDLHRPDLDVHVNFPSCEAEKNGPSAGATVATSLVLMMTGAQLLPNIAISGEINLKGDLLPIGNVKEKVAAAARQGITHIVLSSANVKQFRRLPARIRNAVKALKANHIVEVLKHAV 393
+ VG + GG V++ A G GEL LTG++G + ES +AL+WV+A+ +L L ++E EG DVH++FP+ K+GPSAG T+ TSLV + + ++ + A++GE+ L+G +LP+G VK+KV AA R GI ++L N K +PA + ++++ L A + +VL+ A
Sbjct: 18 VSVGLVWTAFGGEVQFVEATAMG-GKGELHLTGQLGDVIKESAQIALTWVRARATELKLTTAVESNLLEGR-----------DVHIHFPAGAVPKDGPSAGVTLVTSLVSLFSQRRVRADTAMTGEMTLRGLVLPVGGVKDKVLAAHRYGIKRVILPERNFKDLAEVPAAVLSSLEILLAKRMEDVLEQAF 196
BLAST of EWM21310.1 vs. NCBI_GenBank
Match: gi|1130916859|ref|WP_075685959.1| (endopeptidase La [Bacillus sp. MRMR6] >gi|1129875150|gb|OLS41504.1| endopeptidase La [Bacillus sp. MRMR6]) HSP 1 Score: 126.331 bits (316), Expect = 1.789e-26 Identity = 71/195 (36.41%), Postives = 111/195 (56.92%), Query Frame = 0
Query: 203 IGVGCAVSGEGGLAFAVQSEATSPGTGELILTGKIGKSMAESCMVALSWVKAKKRDLCLWMSLEGEDGEGSGCLVDLHRPDLDVHVNFPSCEAEKNGPSAGATVATSLVLMMTGAQLLPNIAISGEINLKGDLLPIGNVKEKVAAAARQGITHIVLSSANVKQFRRLPARIRNAVKALKANHIVEVLKHAVLPPG 397
+ G A + GG ++ + SPG G+L+LTGK+G M ES A S++++K ++L G D H D+H++ P K+GPSAG T+AT+LV ++G + + ++GEI L+G +LPIG +KEK +A R G+T ++L N K +P IRN ++ + +H+ EVLKHA+L G
Sbjct: 595 VATGLAYTTVGGDTLQIEV-SLSPGKGKLVLTGKLGDVMKESAQAAFSYIRSKAKEL--------------GIDQDFHEK-YDIHIHVPEGAVPKDGPSAGITIATALVSALSGKPIRREVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKVILPKDNEKDIDDIPESIRNEMEFVLVSHVDEVLKHALLEGG 773 The following BLAST results are available for this feature:
BLAST of EWM21310.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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