EWM21328.1, cds9345 (CDS) Nannochloropsis gaditana

Overview
NameEWM21328.1
Unique Namecds9345
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:103155..104490 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21328.1
Productanaphase-promoting complex subunit 2
Partialtrue
Orig transcript idgnl|cribi|Naga_100374g1.8589.mrna
GbkeyCDS
End range.
End range104490
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:103155..104490 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM21328.1 vs. NCBI_GenBank
Match: gi|585101512|gb|EWM21328.1| (anaphase-promoting complex subunit 2, partial [Nannochloropsis gaditana])

HSP 1 Score: 909.057 bits (2348), Expect = 0.000e+0
Identity = 445/445 (100.00%), Postives = 445/445 (100.00%), Query Frame = 0
Query:    1 MAPAAFLSSCSPMHDDEAGMEAVKDAWVEVYEALDRHLLFPSKGQCHNDNVQLEGSSAKAWMESVVPRHALRLLQKAGLGSLAVEYVADCMDHELARVVKPAFWEHFDDVGAGREEAENITEMQEHRRVSPHWVIGYMGAALSYADQALRERRAKLAMVAELVVPAEAGRLEDMLRTRLAAFIFNTAPDEFYDWWAAFFETSLRAWHWQWRRQRRQRREGRDGEEGSEEGDIMMSAEEADDAGYEEDEGAWEDWGVHAEEVETALKALRRLHWLPLVQSTITSVVKRETENYIERTCAGVYDEPCLRRVEAWRDAVLMPWLAGLLGEEEEVGGEQTGRGPWTPSAPALGTPHAPPLTSSFHEWRLRHSFVMQECFVRVRMLEMFDIVRDYPDTVAAARDLRAALEVTQQHRQLAACLCESMRQRLLHVGANTMQVLDVYIATIQV 445
            MAPAAFLSSCSPMHDDEAGMEAVKDAWVEVYEALDRHLLFPSKGQCHNDNVQLEGSSAKAWMESVVPRHALRLLQKAGLGSLAVEYVADCMDHELARVVKPAFWEHFDDVGAGREEAENITEMQEHRRVSPHWVIGYMGAALSYADQALRERRAKLAMVAELVVPAEAGRLEDMLRTRLAAFIFNTAPDEFYDWWAAFFETSLRAWHWQWRRQRRQRREGRDGEEGSEEGDIMMSAEEADDAGYEEDEGAWEDWGVHAEEVETALKALRRLHWLPLVQSTITSVVKRETENYIERTCAGVYDEPCLRRVEAWRDAVLMPWLAGLLGEEEEVGGEQTGRGPWTPSAPALGTPHAPPLTSSFHEWRLRHSFVMQECFVRVRMLEMFDIVRDYPDTVAAARDLRAALEVTQQHRQLAACLCESMRQRLLHVGANTMQVLDVYIATIQV
Sbjct:    1 MAPAAFLSSCSPMHDDEAGMEAVKDAWVEVYEALDRHLLFPSKGQCHNDNVQLEGSSAKAWMESVVPRHALRLLQKAGLGSLAVEYVADCMDHELARVVKPAFWEHFDDVGAGREEAENITEMQEHRRVSPHWVIGYMGAALSYADQALRERRAKLAMVAELVVPAEAGRLEDMLRTRLAAFIFNTAPDEFYDWWAAFFETSLRAWHWQWRRQRRQRREGRDGEEGSEEGDIMMSAEEADDAGYEEDEGAWEDWGVHAEEVETALKALRRLHWLPLVQSTITSVVKRETENYIERTCAGVYDEPCLRRVEAWRDAVLMPWLAGLLGEEEEVGGEQTGRGPWTPSAPALGTPHAPPLTSSFHEWRLRHSFVMQECFVRVRMLEMFDIVRDYPDTVAAARDLRAALEVTQQHRQLAACLCESMRQRLLHVGANTMQVLDVYIATIQV 445          
BLAST of EWM21328.1 vs. NCBI_GenBank
Match: gi|632964421|ref|XP_007898391.1| (PREDICTED: anaphase-promoting complex subunit 2 [Callorhinchus milii])

HSP 1 Score: 117.087 bits (292), Expect = 1.805e-24
Identity = 99/395 (25.06%), Postives = 176/395 (44.56%), Query Frame = 0
Query:   68 RHALRLLQKAGLGSLAVEYVADCMDHELARVVKPAFWEHFDDVGAGREEAENITEMQEHRRVSPHWVIGYMGAALSYADQALRERRAKLAMV-----AELVVPAEAGRLEDMLRTRLAAFIFNTAPDEFYDWWAAFFETSLRAWHWQWRRQRRQRREGRDGEEGSEEGDIMMSAEEADDAGYEEDE-------GAWED--WGVHAEEVETALKALRRLHWLPLVQ----STITSVVKRETENYIERTCAGVYDEPCLRRVEAWRDAVLMPWLAGLLGEEEEVGGEQTGRGPWTPSAPALGTPHAPPLTSSFHEWRLRHSFVMQECFVRVRMLEMFDIVRDYPDTVAAARDLRAALEVTQQHRQLAACLCESMRQRLLHVGANTMQVLDVYIATIQ 444
            R AL +LQ+  L  + VE+  + +  +L R + P FW+          + EN+   Q+  ++        +  A    D+ L      L  +     A L+     G L+D +     A +F +    F +    F+    RA+     R +  R            GD M  +EE D++  ++ E        + +D  W V A E  T +  +  LH L L++      IT+++ +  E ++ R C G Y+   L ++E W ++ ++ WL+ +  ++              PS  A     A P +++   WR+   F + + +  +R+ E+F I+RD+P++ AA +DL+  LE T Q +QL   L  ++  RLLH G NT  V+ +YI+ I+
Sbjct:   58 RAALEVLQRYNLHLVVVEWFMEVLQIDLQRKIAPEFWDFL-------TQRENMVTEQQRSKL--------LYDAFCMVDKRLASYLCSLKHLEIWEEAGLINSVGPGTLKDKVYNMFKAVLFFSTTQSFQEIIYEFYT---RAFSIYVHRDKNLR-----------SGDSM--SEEEDESAVDDTEVLHCMGCNSEKDQCWCVTAVEQFTQVNNV--LHSLNLLERISADAITTILHKMIEEHVGRLCRGEYENSFLSQLEEWLESKVICWLSMVFLQK--------------PSKAA-----ASPTSNTLQRWRIHLQFFLYQVYANMRIDELFSIIRDFPESKAALQDLKICLERTNQRQQLLTSLKTALETRLLHPGVNTSDVITLYISAIK 400          
BLAST of EWM21328.1 vs. NCBI_GenBank
Match: gi|678197581|gb|KFV64563.1| (Anaphase-promoting complex subunit 2, partial [Picoides pubescens])

HSP 1 Score: 114.005 bits (284), Expect = 2.005e-23
Identity = 99/392 (25.26%), Postives = 172/392 (43.88%), Query Frame = 0
Query:   68 RHALRLLQKAGLGSLAVEYVADCMDHELARVVKPAFWEHFDDVGAGREEAENITEMQEHRRVSPHWVIGYMGAALSYADQALRERRAKLAMVAELVVPAEAGRLEDMLRTRLAAFIFNTAPDEFYDWWAAFFETSLRAWHWQWRRQRRQRREGRDGEEGSEEGDIMMSAEEADDAGYEEDEGAWED-------------WGVHA-EEVETALKALRRLHWLPLVQS-TITSVVKRETENYIERTCAGVYDEPCLRRVEAWRDAVLMPWLAGLLGEEEEVGGEQTGRGPWTPSAPALGTPHAPPLTSSFHEWRLRHSFVMQECFVRVRMLEMFDIVRDYPDTVAAARDLRAALEVTQQHRQLAACLCESMRQRLLHVGANTMQVLDVYIATIQ 444
            R AL +L+   L S+  E+  + +  +L   + P FW   +      EEA+  + + +   +    +  Y+ +        L ER  K    A L++   A  L++ + T   A +F +    F +    F+  + + +  QWR+          GE+GS E +  MS  E +    + +EGA E              W   A ++ +     LR+LH L  V +  +T+++ R  E  +E+ C G Y+   L   + W + V+  WL+ +  ++          GPW  S P          +S+   WR          +  +R+ E+F I+RD+PD+  A  DL+  LE T Q +QL + L  ++  RLLH G NT  ++ +YI+ I+
Sbjct:   17 RAALEVLRCYDLHSVVEEWFIEVLQTDLQVNIGPEFWNSINQYENTAEEAQCSSLLLDAFCLLKCRLDPYLNSL------ELLERWTK----AGLLLGTGAQMLQEKVYTMFKAILFFSTTKSFQEMIQQFYSRTFKIYMRQWRK----------GEDGSNECESSMSEAEPES---DSEEGAGEGLLCAGCSSKREQCWCPTAMQQFQQLNDILRQLHLLERVSADAVTTILHRMIEERMEQRCRGEYEHSFLDEFQEWIEKVI-GWLSRVFLQD----------GPWARSVPEA--------SSTLRRWRCHVQRFFYRIYASMRIEELFSIIRDFPDSKPAVEDLKFCLERTNQRQQLLSSLKSALEMRLLHPGVNTSDIITLYISAIK 366          
BLAST of EWM21328.1 vs. NCBI_GenBank
Match: gi|699645231|ref|XP_009895143.1| (PREDICTED: anaphase-promoting complex subunit 2 [Picoides pubescens])

HSP 1 Score: 114.005 bits (284), Expect = 2.123e-23
Identity = 99/392 (25.26%), Postives = 172/392 (43.88%), Query Frame = 0
Query:   68 RHALRLLQKAGLGSLAVEYVADCMDHELARVVKPAFWEHFDDVGAGREEAENITEMQEHRRVSPHWVIGYMGAALSYADQALRERRAKLAMVAELVVPAEAGRLEDMLRTRLAAFIFNTAPDEFYDWWAAFFETSLRAWHWQWRRQRRQRREGRDGEEGSEEGDIMMSAEEADDAGYEEDEGAWED-------------WGVHA-EEVETALKALRRLHWLPLVQS-TITSVVKRETENYIERTCAGVYDEPCLRRVEAWRDAVLMPWLAGLLGEEEEVGGEQTGRGPWTPSAPALGTPHAPPLTSSFHEWRLRHSFVMQECFVRVRMLEMFDIVRDYPDTVAAARDLRAALEVTQQHRQLAACLCESMRQRLLHVGANTMQVLDVYIATIQ 444
            R AL +L+   L S+  E+  + +  +L   + P FW   +      EEA+  + + +   +    +  Y+ +        L ER  K    A L++   A  L++ + T   A +F +    F +    F+  + + +  QWR+          GE+GS E +  MS  E +    + +EGA E              W   A ++ +     LR+LH L  V +  +T+++ R  E  +E+ C G Y+   L   + W + V+  WL+ +  ++          GPW  S P          +S+   WR          +  +R+ E+F I+RD+PD+  A  DL+  LE T Q +QL + L  ++  RLLH G NT  ++ +YI+ I+
Sbjct:   19 RAALEVLRCYDLHSVVEEWFIEVLQTDLQVNIGPEFWNSINQYENTAEEAQCSSLLLDAFCLLKCRLDPYLNSL------ELLERWTK----AGLLLGTGAQMLQEKVYTMFKAILFFSTTKSFQEMIQQFYSRTFKIYMRQWRK----------GEDGSNECESSMSEAEPES---DSEEGAGEGLLCAGCSSKREQCWCPTAMQQFQQLNDILRQLHLLERVSADAVTTILHRMIEERMEQRCRGEYEHSFLDEFQEWIEKVI-GWLSRVFLQD----------GPWARSVPEA--------SSTLRRWRCHVQRFFYRIYASMRIEELFSIIRDFPDSKPAVEDLKFCLERTNQRQQLLSSLKSALEMRLLHPGVNTSDIITLYISAIK 368          
BLAST of EWM21328.1 vs. NCBI_GenBank
Match: gi|676395711|ref|XP_009041133.1| (hypothetical protein AURANDRAFT_39152 [Aureococcus anophagefferens] >gi|323448246|gb|EGB04147.1| hypothetical protein AURANDRAFT_39152 [Aureococcus anophagefferens])

HSP 1 Score: 108.612 bits (270), Expect = 1.172e-21
Identity = 76/267 (28.46%), Postives = 118/267 (44.19%), Query Frame = 0
Query:  179 LAAFIFNTAPDEFYDWWAAFFETSLRAWHWQWRRQRRQRREGRDGEEGSEEGDIMMSAEEADDAGYEEDEGAWEDWGVHAEEVETALKALRRLHWLPLVQSTITSVVKRETENYIERTCAGVYDEPCLRRVEAWRDAVLMPWLAGLLGEEEEVGGEQTGRGPWTPSAPALGTPHAPPLTSSFHEWRLRHSFVMQECFVRVRMLEMFDIVRDYPDTVAAARDLRAALEVTQQHRQLAACLCESMRQRLLHVGANTMQVLDVYIATIQV 445
             AA IF  AP+EF        E SL   H  +            G++ S+ G  M          +         W            +++ L W      T+  V  R  E  +   C+  YD P    ++ W++ VL+PWL  + G   E G  +  +G    S   L                   + V+ E +VR R+ E++DI+ D+P+++ A  +LRA L  TQQH+ LA  L  ++++RLLH GAN+ Q++DVYI+TI+V
Sbjct:   66 FAALIFAHAPNEFIICIEDMIEDSLTEVHDSFF----------SGDDLSDLGSAMQPISSKVFVSF---------WN-----------SIQELQWCHFFDETVHKVFYRGIERCVFGLCSAKYDSPMTEILDRWKELVLLPWLRVIEGRRLE-GQCKCAKGRGIESLTGLV------------------NLVIDENYVRARINELYDIIADFPESMCAVNELRATLSRTQQHQLLARSLRSTLQRRLLHSGANSSQIIDVYISTIKV 283          
BLAST of EWM21328.1 vs. NCBI_GenBank
Match: gi|168011101|ref|XP_001758242.1| (predicted protein [Physcomitrella patens] >gi|162690698|gb|EDQ77064.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 108.227 bits (269), Expect = 1.860e-21
Identity = 89/337 (26.41%), Postives = 148/337 (43.92%), Query Frame = 0
Query:  133 WVIGYMGAALSYADQALRERRAKLAMVAELVVPAEAGRLEDMLR------TRLAAFIFNTAPDEFYDWWAAFFETSLRAWHWQWRRQRRQRREGRDGEEGSEEGDIMMSAEEADDAGYEEDEG---------AWEDWGVHAEEVETALKALRRLHWLPLVQSTITSVVKRETENYIERTCAGVYDEPCLRRVEAWRDAVLMPWLAGLLGEEEEVGGEQTGRGPWTPSAPALGTPHAP---PLTSS-------FHEWRLRHSFVMQECFVRVRMLEMFDIVRDYPDTVAAARDLRAALEVTQQHRQLAACLCESMRQRLLHVGANTMQVLDVYIATIQ 444
            WV       LS    A   +   L ++ +L+    +G   ++ R      T ++A +  +AP +F +    +F+  L  +    R+  R  +    G EGS++ D+   +EE++    E+DE          A E+W      + T ++ LRR+ +  L +    S +    +  I       YD+P L  + +W +AV + +L  +L          +G  P   S     +P A    P T +          WRLR  F   E    +R+ E+FDI+ DYP+++ A  DLR  L  T+ H +L      S+RQRLL  GA T  +L  Y++TI+
Sbjct:    6 WVQSTFPKVLSEVSSAKLAQEESLRLLTQLIFHGTSGHSTEVERYLSHYHTAISALLLTSAPQQFPEILNLYFKARLEEFSKAMRQHNRSTQSC--GSEGSDDDDV---SEESEVIKGEDDEMESIRSIAVVAGEEW---VTGLGTVIRNLRRIGFAALSEEGYASSIYSLLKVKIHAITNKRYDKPVLESIRSWIEAVPLRFLFVILA--------SSGAPPSKTSLATFPSPLASLSIPTTGADEAVKEGVVRWRLRLHFFAYETLGDLRITELFDIIVDYPESLPAIEDLRQCLTNTRHHSKLIDSFRTSLRQRLLTAGAATTDILLQYVSTIK 326          
BLAST of EWM21328.1 vs. NCBI_GenBank
Match: gi|1210017926|ref|XP_021403337.1| (anaphase-promoting complex subunit 2 [Lonchura striata domestica] >gi|1208023631|gb|OWK50475.1| Anaphase-promoting complex subunit 2 [Lonchura striata domestica])

HSP 1 Score: 107.842 bits (268), Expect = 2.138e-21
Identity = 96/388 (24.74%), Postives = 166/388 (42.78%), Query Frame = 0
Query:   68 RHALRLLQKAGLGSLAVEYVADCMDHELARVVKPAFWEHFDDVGAGREEAENITEMQEHRRVSPHWVIGYMGAALSYADQALRERRAKLAMVAELVVPAEAGRLEDMLRTRLAAFIFNTAPDEFYDWWAAFFETSLRAWHWQWRRQRRQRREGRDGEEGSEEGDIMMSAEEADDAGYEEDEGAW---------EDWGVHA-EEVETALKALRRLHWLPLVQS-TITSVVKRETENYIERTCAGVYDEPCLRRVEAWRDAVLMPWLAGLLGEEEEVGGEQTGRGPWTPSAPALGTPHAPPLTSSFHEWRLRHSFVMQECFVRVRMLEMFDIVRDYPDTVAAARDLRAALEVTQQHRQLAACLCESMRQRLLHVGANTMQVLDVYIATIQ 444
            R AL +LQ   L S+  E+  + +  +L   + P FW          EE +    + +   +    +  Y+ +        L E+  K    A L++   A  L++ + T   A +F +    F D    F+  + R +  QW++          GE+G  E +  MS  E +    E  EG           + W   A E+ +     LRRL+ L  V +  +T+++ R  E  +E+ C G Y+   L   + W + V+  WL+ +  ++          GP   S+P          +S+   WR          +  +R+ E+F I+RD+P++  A  DL+  LE T Q +QL + L  ++  RLLH G NT  ++ +YI+ I+
Sbjct:   39 RAALDVLQCYDLHSIVEEWFIEVLQTDLQANIGPEFWNCIGQYENTAEEPQCAALLLDAFSLLKCHLEPYLNSL------ELLEQWTK----AGLLLGTGAQTLQEKVYTMFKAILFFSTTKSFQDMIQQFYSRTFRIYMQQWKK----------GEDGMNECESSMSETEQESDPEEGGEGQLCAGCSSKREQCWCPEAMEKFQQLNDILRRLNLLERVSADAVTTILHRMIEERMEQRCRGEYEHSFLNEFQEWIEKVI-GWLSRVFLQD----------GPSAQSSPEA--------SSTLKRWRCHVQRFFYRIYASMRIEELFSIIRDFPESKPAVEDLKFCLERTNQRQQLLSSLKSALEMRLLHPGVNTSDIITLYISAIK 387          
BLAST of EWM21328.1 vs. NCBI_GenBank
Match: gi|699601072|ref|XP_009870019.1| (PREDICTED: anaphase-promoting complex subunit 2, partial [Apaloderma vittatum] >gi|677307627|gb|KFP90055.1| Anaphase-promoting complex subunit 2, partial [Apaloderma vittatum])

HSP 1 Score: 107.457 bits (267), Expect = 3.022e-21
Identity = 99/394 (25.13%), Postives = 171/394 (43.40%), Query Frame = 0
Query:   68 RHALRLLQKAGLGSLAVEYVADCMDHELARVVKPAFWEHFDDVGAGREEAENITEMQE-----HRRVSPHWVIGYMGAALSYADQALRERRAKLAMVAELVVPAEAGRLEDMLRTRLAAFIFNTAPDEFYDWWAAFFETSLRAWHWQWRRQRRQRREGRDGEEGSEEGDIMMSAEE----ADDAGYEE------DEGAWEDWGVHA-EEVETALKALRRLHWLPLVQS-TITSVVKRETENYIERTCAGVYDEPCLRRVEAWRDAVLMPWLAGLLGEEEEVGGEQTGRGPWTPSAPALGTPHAPPLTSSFHEWRLRHSFVMQECFVRVRMLEMFDIVRDYPDTVAAARDLRAALEVTQQHRQLAACLCESMRQRLLHVGANTMQVLDVYIATIQ 444
            R AL +L+   L S+  E+  + +  +L   + P FW   D      EE +  + + +      RR+ P     Y+ +        L E   K    A L++   A  L++ + T   A +F +    F +    F+  + R +  QW++          GE+G+ E +  MS  E     ++ G E       D    E W   A E+ +     LRRL+ L  V +  +T+++ R  E  +E+ C G Y+   L   + W + V+  WL+ +  ++          GP   S+P          +S+   WR          +  +R+ E+F I+RD+P++  A  DL+  LE T Q +QL + L  ++  RLLH G NT  ++ +YI+ I+
Sbjct:   17 RAALDVLRCYDLHSVVEEWFIEVLQTDLQANIAPEFWNCIDQCENTAEELQCSSLLLDAFCLLKRRLDP-----YLNSL------ELLEGWTK----AGLLLGTGAQMLQEKVYTMFKAILFFSTTKSFQEMIQQFYSRTFRIYMRQWKK----------GEDGTNECESSMSETEQESDTEEGGGESPFCAGCDSKREECWCTKAMEQFQQLNDILRRLNLLERVSADAVTTILHRMIEERMEQRCWGEYEHSFLNEFQEWIEKVI-GWLSRVFLQD----------GPLARSSPEA--------SSTLKRWRCHVQRFFYRIYASMRIEELFSIIRDFPESKPAVEDLKFCLERTNQRQQLLSSLKSALEMRLLHPGVNTSDIITLYISAIK 366          
BLAST of EWM21328.1 vs. NCBI_GenBank
Match: gi|701327933|ref|XP_009976279.1| (PREDICTED: anaphase-promoting complex subunit 2, partial [Tauraco erythrolophus] >gi|678130385|gb|KFU99571.1| Anaphase-promoting complex subunit 2, partial [Tauraco erythrolophus])

HSP 1 Score: 107.457 bits (267), Expect = 3.341e-21
Identity = 98/397 (24.69%), Postives = 171/397 (43.07%), Query Frame = 0
Query:   68 RHALRLLQKAGLGSLAVEYVADCMDHELARVVKPAFWEHFDDVGAGREEAENITEMQE-----HRRVSPHWVIGYMGAALSYADQALRERRAKLAMVAELVVPAEAGRLEDMLRTRLAAFIFNTAPDEFYDWWAAFFETSLRAWHWQWRRQRRQRREGRDGEEGSEEGDIMMSAEEADDAGYEEDEGAWED-------------WGVHA-EEVETALKALRRLHWLPLVQS-TITSVVKRETENYIERTCAGVYDEPCLRRVEAWRDAVLMPWLAGLLGEEEEVGGEQTGRGPWTPSAPALGTPHAPPLTSSFHEWRLRHSFVMQECFVRVRMLEMFDIVRDYPDTVAAARDLRAALEVTQQHRQLAACLCESMRQRLLHVGANTMQVLDVYIATIQ 444
            R AL +L+   L S+  E+  + +  +L   + P FW          EE +  + + +      RR+ P     Y+ +        L ER  K    A L++   A  L++ + T   A +F +    F +    F+  + R +  QW++          GE+G+ E +  MS  E +    + +EG  E              W   A E+ +     LRRL+ L  V +  +T+++ R  E  +E+ C G Y+   L   + W + V+  WL+ +  ++          GP   S+P          +S+   WR          +  +R+ E+F I+RD+P++  A  DL+  LE T Q +QL + L  ++  RLLH G NT  ++ +YI+ I+
Sbjct:   17 RAALDVLRCYDLHSVVEEWFIEVLQTDLQANIAPEFWNCISQYENTAEEPQCSSLLLDAFSLLKRRLDP-----YLNSL------ELLERWTK----AGLLLGTGAQMLQEKVYTMFKAILFFSTTKSFQEMIQQFYSRTFRIYMRQWKK----------GEDGTNECESSMSETEQES---DTEEGGGESPLCAGCSSKREQCWCPKAMEQFQQLNDILRRLNLLERVSADAVTTILHRMIEERMEQRCRGEYEHSFLNEFQEWIEKVI-GWLSKVFLQD----------GPLAHSSPEA--------SSTLKRWRCHVQRFFYRIYASMRIEELFSIIRDFPESKPAVEDLKFCLERTNQRQQLLSSLKSALEMRLLHPGVNTSDIITLYISAIK 366          
BLAST of EWM21328.1 vs. NCBI_GenBank
Match: gi|677527442|gb|KFQ90742.1| (Anaphase-promoting complex subunit 2, partial [Nipponia nippon])

HSP 1 Score: 107.457 bits (267), Expect = 3.465e-21
Identity = 96/392 (24.49%), Postives = 169/392 (43.11%), Query Frame = 0
Query:   68 RHALRLLQKAGLGSLAVEYVADCMDHELARVVKPAFWEHFDDVGAGREEAENITEMQEHRRVSPHWVIGYMGAALSYADQALRERRAKLAMVAELVVPAEAGRLEDMLRTRLAAFIFNTAPDEFYDWWAAFFETSLRAWHWQWRRQRRQRREGRDGEEGSEEGDIMMSAEEADDAGYEEDEGAWED-------------WGVHA-EEVETALKALRRLHWLPLVQS-TITSVVKRETENYIERTCAGVYDEPCLRRVEAWRDAVLMPWLAGLLGEEEEVGGEQTGRGPWTPSAPALGTPHAPPLTSSFHEWRLRHSFVMQECFVRVRMLEMFDIVRDYPDTVAAARDLRAALEVTQQHRQLAACLCESMRQRLLHVGANTMQVLDVYIATIQ 444
            R AL +L+   L S+  E+  + +  +L   + P FW          EE +  + + +   +    +  Y+ +        L ER  K    A L++   A  L++ + T   A +F +    F +    F+  + R +  QW++          GE+G+ E +  MS  E +    + +EG  E              W   A E+ +     LRRLH L  V +  +T+++ R  E  +E+ C G Y+   L   + W + V+  WL+ +  ++          GP   S+P          +S+   WR          +  +R+ E+F I+RD+P++  A  DL+  LE T Q +QL + L  ++  RLLH G NT  ++ +YI+ I+
Sbjct:   17 RAALDVLRCYDLHSIVEEWFIEVLQTDLQANIAPEFWNCIGQYENTAEEPQCSSLLLDAFCLLKCRLDPYLNSL------ELLERWTK----AGLLLGTGAQMLQEKVYTMFKAILFFSTTKSFQEMIQQFYSRTFRIYMRQWKK----------GEDGTNECESSMSETEQES---DTEEGGGESPLCAGCSSKREQCWCPKAMEQFQQLNDILRRLHLLERVSADAVTTILHRMIEERMEQRCRGEYEHSFLNEFQEWIEKVI-GWLSRVFLQD----------GPLARSSPEA--------SSTLKRWRCHVQRFFYRIYASMRIEELFSIIRDFPESKPAVEDLKFCLERTNQRQQLLSSLKSALEMRLLHPGVNTSDIITLYISAIK 366          
The following BLAST results are available for this feature:
BLAST of EWM21328.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101512|gb|EWM21328.1|0.000e+0100.00anaphase-promoting complex subunit 2, partial [Nan... [more]
gi|632964421|ref|XP_007898391.1|1.805e-2425.06PREDICTED: anaphase-promoting complex subunit 2 [C... [more]
gi|678197581|gb|KFV64563.1|2.005e-2325.26Anaphase-promoting complex subunit 2, partial [Pic... [more]
gi|699645231|ref|XP_009895143.1|2.123e-2325.26PREDICTED: anaphase-promoting complex subunit 2 [P... [more]
gi|676395711|ref|XP_009041133.1|1.172e-2128.46hypothetical protein AURANDRAFT_39152 [Aureococcus... [more]
gi|168011101|ref|XP_001758242.1|1.860e-2126.41predicted protein [Physcomitrella patens] >gi|1626... [more]
gi|1210017926|ref|XP_021403337.1|2.138e-2124.74anaphase-promoting complex subunit 2 [Lonchura str... [more]
gi|699601072|ref|XP_009870019.1|3.022e-2125.13PREDICTED: anaphase-promoting complex subunit 2, p... [more]
gi|701327933|ref|XP_009976279.1|3.341e-2124.69PREDICTED: anaphase-promoting complex subunit 2, p... [more]
gi|677527442|gb|KFQ90742.1|3.465e-2124.49Anaphase-promoting complex subunit 2, partial [Nip... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9375rna9375Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications