EWM21354.1, cds9341 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21354.1 vs. NCBI_GenBank
Match: gi|585101539|gb|EWM21354.1| (cysteine-rich pdz-binding protein [Nannochloropsis gaditana]) HSP 1 Score: 221.09 bits (562), Expect = 4.926e-73 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
Query: 1 MVCDACEKKLGKLCVPDKWKEGSRNVTGGKDGGRVPTSSGPSASLNKLSEKRKARLAEAGGGLGRQCRICKVRIMDVQRHYCNGCAYKKAICAMCGRKVGDTKLYKMSSK 110
MVCDACEKKLGKLCVPDKWKEGSRNVTGGKDGGRVPTSSGPSASLNKLSEKRKARLAEAGGGLGRQCRICKVRIMDVQRHYCNGCAYKKAICAMCGRKVGDTKLYKMSSK
Sbjct: 1 MVCDACEKKLGKLCVPDKWKEGSRNVTGGKDGGRVPTSSGPSASLNKLSEKRKARLAEAGGGLGRQCRICKVRIMDVQRHYCNGCAYKKAICAMCGRKVGDTKLYKMSSK 110
BLAST of EWM21354.1 vs. NCBI_GenBank
Match: gi|325184170|emb|CCA18628.1| (conserved unknown protein putative [Albugo laibachii Nc14]) HSP 1 Score: 114.005 bits (284), Expect = 2.000e-28 Identity = 59/110 (53.64%), Postives = 73/110 (66.36%), Query Frame = 0
Query: 1 MVCDACEKKLGKLCVPDKWKEGSRNVTGGKDGGRVPTSSGPSASLNKLSEKRKARLAEAGGGLGRQCRICKVRIMDVQRHYCNGCAYKKAICAMCGRKVGDTKLYKMSSK 110
MVC+ CE KL L VPDKWK+G+RNVTGGKDGGR + NKL EK+ R++ + R+CRIC+ +I HYCN CAY+K IC+MCGRK+ D Y MSSK
Sbjct: 1 MVCEKCEAKLTTLIVPDKWKDGARNVTGGKDGGR-------AVGTNKLVEKK--RISNRFSPMERRCRICRSKIGQ-NAHYCNQCAYQKGICSMCGRKMLDISQYNMSSK 100
BLAST of EWM21354.1 vs. NCBI_GenBank
Match: gi|325184169|emb|CCA18627.1| (conserved unknown protein putative [Albugo laibachii Nc14]) HSP 1 Score: 112.464 bits (280), Expect = 7.327e-28 Identity = 58/109 (53.21%), Postives = 72/109 (66.06%), Query Frame = 0
Query: 1 MVCDACEKKLGKLCVPDKWKEGSRNVTGGKDGGRVPTSSGPSASLNKLSEKRKARLAEAGGGLGRQCRICKVRIMDVQRHYCNGCAYKKAICAMCGRKVGDTKLYKMSS 109
MVC+ CE KL L VPDKWK+G+RNVTGGKDGGR + NKL EK+ R++ + R+CRIC+ +I HYCN CAY+K IC+MCGRK+ D Y MSS
Sbjct: 1 MVCEKCEAKLTTLIVPDKWKDGARNVTGGKDGGR-------AVGTNKLVEKK--RISNRFSPMERRCRICRSKIGQ-NAHYCNQCAYQKGICSMCGRKMLDISQYNMSS 99
BLAST of EWM21354.1 vs. NCBI_GenBank
Match: gi|597737600|ref|XP_007231035.1| (PREDICTED: cysteine-rich PDZ-binding protein [Astyanax mexicanus]) HSP 1 Score: 102.834 bits (255), Expect = 2.648e-26 Identity = 55/109 (50.46%), Postives = 64/109 (58.72%), Query Frame = 0
Query: 1 MVCDACEKKLGKLCVPDKWKEGSRNVTGGKDGGRVPTSSGPSASLNKLSEKRKARLAEAGGGLGRQCRICKVRIMDVQRHYCNGCAYKKAICAMCGRKVGDTKLYKMSS 109
MVCD CEKKLGK+ PD WK+G+RN T S G + NK+ +KAR G CRICK + HYC GCAYKK ICAMCG+KV DTK YK +S
Sbjct: 1 MVCDKCEKKLGKVITPDTWKDGARNTT---------ESGGRKLNENKMLTSKKARFDPYGKSGFATCRICKSSVHQAGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTS 100
BLAST of EWM21354.1 vs. NCBI_GenBank
Match: gi|669152796|ref|XP_008611960.1| (cysteine-rich PDZ-binding protein [Saprolegnia diclina VS20] >gi|813110911|ref|XP_012195039.1| cysteine-rich PDZ-binding protein [Saprolegnia parasitica CBS 223.65] >gi|530736312|gb|EQC34554.1| cysteine-rich PDZ-binding protein [Saprolegnia diclina VS20] >gi|641540461|gb|KDO34243.1| cysteine-rich PDZ-binding protein [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 101.293 bits (251), Expect = 8.586e-26 Identity = 53/108 (49.07%), Postives = 65/108 (60.19%), Query Frame = 0
Query: 1 MVCDACEKKLGKLCVPDKWKEGSRNVTGGKDGGRVPTSSGPSASLNKLSEKRKARLAEAGGGLGRQCRICKVRIMDVQRHYCNGCAYKKAICAMCGRKVGDTKLYKMS 108
MVC CE+KL KL VPDKWK+G+RN GGKDGGR ++ ++ + + R CRICK ++ HYC CAYKK ICAMCGRKV DTK+ MS
Sbjct: 1 MVCGKCEEKLSKLIVPDKWKDGARNTMGGKDGGRKLATNAALGKKHRFTP------------MSRACRICKSKVAQ-NAHYCQDCAYKKGICAMCGRKVADTKMLNMS 95
BLAST of EWM21354.1 vs. NCBI_GenBank
Match: gi|1173943177|gb|OQR92062.1| (hypothetical protein ACHHYP_04080 [Achlya hypogyna]) HSP 1 Score: 100.908 bits (250), Expect = 1.273e-25 Identity = 52/108 (48.15%), Postives = 65/108 (60.19%), Query Frame = 0
Query: 1 MVCDACEKKLGKLCVPDKWKEGSRNVTGGKDGGRVPTSSGPSASLNKLSEKRKARLAEAGGGLGRQCRICKVRIMDVQRHYCNGCAYKKAICAMCGRKVGDTKLYKMS 108
MVC CE+KL KL VPDKWK+G+RN TGGKDGGR + ++ + + R CRICK ++ HYC C+YKK ICAMCGRK+ DTK+ MS
Sbjct: 1 MVCGKCEEKLSKLIVPDKWKDGARNTTGGKDGGRKIAQNSALGKKHRFTP------------MSRACRICKSKVSQ-NAHYCQDCSYKKGICAMCGRKIADTKMLNMS 95
BLAST of EWM21354.1 vs. NCBI_GenBank
Match: gi|1143420580|ref|XP_019964370.1| (PREDICTED: cysteine-rich PDZ-binding protein [Paralichthys olivaceus]) HSP 1 Score: 100.908 bits (250), Expect = 1.523e-25 Identity = 55/109 (50.46%), Postives = 66/109 (60.55%), Query Frame = 0
Query: 1 MVCDACEKKLGKLCVPDKWKEGSRNVTGGKDGGRVPTSSGPSASLNKLSEKRKARLAEAGGGLGRQCRICKVRIMDVQRHYCNGCAYKKAICAMCGRKVGDTKLYKMSS 109
MVC+ CEKKLGK+ PD WK+G+RN T + GGR + NK+ +KAR G CRICK + HYC GCAYKK ICAMCG+KV DTK YK +S
Sbjct: 1 MVCEKCEKKLGKVITPDTWKDGARNTT--ESGGR-------KLNENKMLTSKKARFDPYSKGGFTTCRICKSSVHQSGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTS 100
BLAST of EWM21354.1 vs. NCBI_GenBank
Match: gi|229366638|gb|ACQ58299.1| (Cysteine-rich PDZ-binding protein [Anoplopoma fimbria]) HSP 1 Score: 100.523 bits (249), Expect = 2.232e-25 Identity = 56/109 (51.38%), Postives = 65/109 (59.63%), Query Frame = 0
Query: 1 MVCDACEKKLGKLCVPDKWKEGSRNVTGGKDGGRVPTSSGPSASLNKLSEKRKARLAEAGGGLGRQCRICKVRIMDVQRHYCNGCAYKKAICAMCGRKVGDTKLYKMSS 109
MVC+ CEKKLGK+ PD WK+G+RN T G GGR + NK+ +KAR CRICK + HYC GCAYKK ICAMCGRKV DTK YK +S
Sbjct: 1 MVCEKCEKKLGKVITPDTWKDGARNTTEG--GGR-------KLNENKILTSKKARFDPYSKTGFATCRICKSSVHQSGSHYCQGCAYKKGICAMCGRKVLDTKNYKQTS 100
BLAST of EWM21354.1 vs. NCBI_GenBank
Match: gi|537170883|gb|ERE74280.1| (cysteine-rich PDZ-binding protein [Cricetulus griseus]) HSP 1 Score: 100.138 bits (248), Expect = 3.194e-25 Identity = 55/110 (50.00%), Postives = 65/110 (59.09%), Query Frame = 0
Query: 1 MVCDACEKKLGKLCVPDKWKEGSRNVTGGKDGGRVPTSSGPSASLNKLSEKRKARLAEAGGGLGRQCRICKVRIMDVQRHYCNGCAYKKAICAMCGRKVGDTKLYKMSSK 110
MVC+ CEKKLG + PD WK+G+RN T + GGR + NK +KAR G CRICK + HYC GCAYKK ICAMCG+KV DTK YK +SK
Sbjct: 1 MVCEKCEKKLGTVITPDTWKDGARNTT--ESGGR-------KLNENKALTSKKARFDPYGKNKFSTCRICKSSVHQPGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTSK 101
BLAST of EWM21354.1 vs. NCBI_GenBank
Match: gi|1049209123|ref|XP_017556505.1| (PREDICTED: cysteine-rich PDZ-binding protein [Pygocentrus nattereri]) HSP 1 Score: 100.138 bits (248), Expect = 3.237e-25 Identity = 53/109 (48.62%), Postives = 64/109 (58.72%), Query Frame = 0
Query: 1 MVCDACEKKLGKLCVPDKWKEGSRNVTGGKDGGRVPTSSGPSASLNKLSEKRKARLAEAGGGLGRQCRICKVRIMDVQRHYCNGCAYKKAICAMCGRKVGDTKLYKMSS 109
MVC+ CEKKLG++ PD WK+G+RN T S G + NK+ +KAR G CRICK + HYC GCAYKK ICAMCG+KV DTK YK +S
Sbjct: 1 MVCEKCEKKLGRVITPDTWKDGARNTT---------ESGGRKLNENKMLTSKKARFDPYGKSGFATCRICKSSVHQAGSHYCQGCAYKKGICAMCGKKVLDTKNYKQTS 100 The following BLAST results are available for this feature:
BLAST of EWM21354.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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