EWM21349.1, cds9334 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21349.1 vs. NCBI_GenBank
Match: gi|585101534|gb|EWM21349.1| (DNA-binding SAP [Nannochloropsis gaditana]) HSP 1 Score: 1050.81 bits (2716), Expect = 0.000e+0 Identity = 533/533 (100.00%), Postives = 533/533 (100.00%), Query Frame = 0
Query: 1 MALPTLETIKGMKVAELKKELEKLDLSVKGLKADLMQRLMQHVEKAAAAEEGGSDDVDGLNDKPEPQDETLKPSVKAIVEEELVGTASKGPSGSSREKEQEGEVMAEAAPSAVHPSPSPAPANPSELEHNPDRGIEKEKPSHLTSPAEASAAPQAAEPSEIGSSLRQVADALPSSPSSATVPSESAQSSDMAAAVTQKGHASPAPIDAEVKKGTGPSETALLAREESLSGADAPEPAAALVPAPKNPRSATIRVDGFIRPFRLVAAKEMLEERGGGPLVGEDGMWMDVIKTHCYATFQSEECAARARIALHKYQWPERGGVLTADFSPKTAAQVTEEDKLLKKARAASRLQEGGDKTGGARPGEPLAATPRTTALAAASAETQRVSNSLVPPPAPFEAPPHLGGAESGGSVRRKRELGPSPERIVRARRDAEGAKEAVKEEEDEKPAMPTLEELFRSTSTPPKLYWTPVPEDQVARKRERLKELKAEAKLEAKKREAAGGVRQPAADRRWAGRDGGGGGGYRSRNRSPPRRRW 533
MALPTLETIKGMKVAELKKELEKLDLSVKGLKADLMQRLMQHVEKAAAAEEGGSDDVDGLNDKPEPQDETLKPSVKAIVEEELVGTASKGPSGSSREKEQEGEVMAEAAPSAVHPSPSPAPANPSELEHNPDRGIEKEKPSHLTSPAEASAAPQAAEPSEIGSSLRQVADALPSSPSSATVPSESAQSSDMAAAVTQKGHASPAPIDAEVKKGTGPSETALLAREESLSGADAPEPAAALVPAPKNPRSATIRVDGFIRPFRLVAAKEMLEERGGGPLVGEDGMWMDVIKTHCYATFQSEECAARARIALHKYQWPERGGVLTADFSPKTAAQVTEEDKLLKKARAASRLQEGGDKTGGARPGEPLAATPRTTALAAASAETQRVSNSLVPPPAPFEAPPHLGGAESGGSVRRKRELGPSPERIVRARRDAEGAKEAVKEEEDEKPAMPTLEELFRSTSTPPKLYWTPVPEDQVARKRERLKELKAEAKLEAKKREAAGGVRQPAADRRWAGRDGGGGGGYRSRNRSPPRRRW
Sbjct: 1 MALPTLETIKGMKVAELKKELEKLDLSVKGLKADLMQRLMQHVEKAAAAEEGGSDDVDGLNDKPEPQDETLKPSVKAIVEEELVGTASKGPSGSSREKEQEGEVMAEAAPSAVHPSPSPAPANPSELEHNPDRGIEKEKPSHLTSPAEASAAPQAAEPSEIGSSLRQVADALPSSPSSATVPSESAQSSDMAAAVTQKGHASPAPIDAEVKKGTGPSETALLAREESLSGADAPEPAAALVPAPKNPRSATIRVDGFIRPFRLVAAKEMLEERGGGPLVGEDGMWMDVIKTHCYATFQSEECAARARIALHKYQWPERGGVLTADFSPKTAAQVTEEDKLLKKARAASRLQEGGDKTGGARPGEPLAATPRTTALAAASAETQRVSNSLVPPPAPFEAPPHLGGAESGGSVRRKRELGPSPERIVRARRDAEGAKEAVKEEEDEKPAMPTLEELFRSTSTPPKLYWTPVPEDQVARKRERLKELKAEAKLEAKKREAAGGVRQPAADRRWAGRDGGGGGGYRSRNRSPPRRRW 533
BLAST of EWM21349.1 vs. NCBI_GenBank
Match: gi|553181676|ref|XP_005853605.1| (apoptotic chromatin condensation inducer in the nucleus, partial [Nannochloropsis gaditana CCMP526] >gi|422295454|gb|EKU22753.1| apoptotic chromatin condensation inducer in the nucleus, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 724.161 bits (1868), Expect = 0.000e+0 Identity = 368/370 (99.46%), Postives = 368/370 (99.46%), Query Frame = 0
Query: 1 MALPTLETIKGMKVAELKKELEKLDLSVKGLKADLMQRLMQHVEKAAAAEEGGSDDVDGLNDKPEPQDETLKPSVKAIVEEELVGTASKGPSGSSREKEQEGEVMAEAAPSAVHPSPSPAPANPSELEHNPDRGIEKEKPSHLTSPAEASAAPQAAEPSEIGSSLRQVADALPSSPSSATVPSESAQSSDMAAAVTQKGHASPAPIDAEVKKGTGPSETALLAREESLSGADAPEPAAALVPAPKNPRSATIRVDGFIRPFRLVAAKEMLEERGGGPLVGEDGMWMDVIKTHCYATFQSEECAARARIALHKYQWPERGGVLTADFSPKTAAQVTEEDKLLKKARAASRLQEGGDKTGGARPGEPLAATP 370
MALPTLETIKGMKVAELKKELEKLDL VKGLKADLMQRLMQHVEKAAAAEEGGSDDVDGLNDKPEPQDETLKPSVKAIVEEELVGTASKGPSGSSREKEQEGEVMAEAAPSAVHPSPSPAPANPSELEHNPDRGIEKEKPSHLTSPAEASAAPQAAEPSEIGSSLRQVADALPSSPSSATVPSESAQSSDMAAAVTQKG ASPAPIDAEVKKGTGPSETALLAREESLSGADAPEPAAALVPAPKNPRSATIRVDGFIRPFRLVAAKEMLEERGGGPLVGEDGMWMDVIKTHCYATFQSEECAARARIALHKYQWPERGGVLTADFSPKTAAQVTEEDKLLKKARAASRLQEGGDKTGGARPGEPLAATP
Sbjct: 1 MALPTLETIKGMKVAELKKELEKLDLPVKGLKADLMQRLMQHVEKAAAAEEGGSDDVDGLNDKPEPQDETLKPSVKAIVEEELVGTASKGPSGSSREKEQEGEVMAEAAPSAVHPSPSPAPANPSELEHNPDRGIEKEKPSHLTSPAEASAAPQAAEPSEIGSSLRQVADALPSSPSSATVPSESAQSSDMAAAVTQKGRASPAPIDAEVKKGTGPSETALLAREESLSGADAPEPAAALVPAPKNPRSATIRVDGFIRPFRLVAAKEMLEERGGGPLVGEDGMWMDVIKTHCYATFQSEECAARARIALHKYQWPERGGVLTADFSPKTAAQVTEEDKLLKKARAASRLQEGGDKTGGARPGEPLAATP 370
BLAST of EWM21349.1 vs. NCBI_GenBank
Match: gi|298710395|emb|CBJ25459.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 99.3673 bits (246), Expect = 2.991e-18 Identity = 82/257 (31.91%), Postives = 122/257 (47.47%), Query Frame = 0
Query: 251 TIRVDGFIRPFRLVAAKEMLEERGGGPLVGEDGMWMDVIKTHCYATFQSEECAARARIALHKYQWPERGGV-LTADFSPKTAAQVTEEDKLLKKARAASRLQEGGDK--------------------TGGARPGEPLAATPRTTALAAASAETQRVSNSLVPPPAPFEAPPHLGGAESGGSVRRKRELGPSPE-RIVRARRDAEGAKEAVKE--EEDEKPAMPTLEELFRSTSTPPKLYWTPVPEDQVARKRERLKE 483
TIRVD F+RPF AK++LEE+ P++ E G WMD IKTHCYATF +E A RA AL QWP + L A +A EE + ++ ++R G D+ GG G AT ++A+A S R S+ P G A S G V L + E + R+R G + ++ EE+ +P + L+++FR T P LYW P+ E++V ++++++E
Sbjct: 366 TIRVDNFVRPFTAQQAKKLLEEKAEAPVM-EGGFWMDGIKTHCYATFDGKEAAERAMAALQGLQWPAQSFKRLEATLGDMSA----EEARARDGSKRSNRPFPGMDRPARVLGPRVTPTAEAKSSPEGGGQANGSGAHATDESSAVAGGSTARVRGRGSVQAP----------GVAGSRGGV-----LAANVEAEVGRSRGQDRGGLQQPQQGPEEEAEPII--LDDMFRKTDAKPSLYWLPLSEEEVGLRKKKMEE 600
BLAST of EWM21349.1 vs. NCBI_GenBank
Match: gi|1201314987|gb|OVA14662.1| (SAP domain [Macleaya cordata]) HSP 1 Score: 96.2857 bits (238), Expect = 2.872e-17 Identity = 78/255 (30.59%), Postives = 113/255 (44.31%), Query Frame = 0
Query: 229 SGADAPEPAAALVPAPKNPRSATIRVDGFIRPFRLVAAKEMLEERGGGPLVGEDGMWMDVIKTHCYATFQSEECAARARIALHKYQWPERGG-VLTADFSPKTAAQVTEEDKLLKKARAASRLQEGGDKTGGARPGEPLAATPRTTALAAASAETQRVSNSLVPPPAPFEAPP----HLGGAESGGSVRRKRELGPSPERIVRARRDAEGAKEAVKEEEDEKPAMPTLEELFRSTSTPPKLYWTPVPEDQVARKR 478
SGADAP+ +VP P + ++R+D F+RPF L A +E+L + G WMD IKTHCY T+ S E A R AL+ QWP GG +L A+F D K RA E ++ ARP P++A+P T + P+PF++ P H+ + S R R + + TL++LF+ T P++Y+ P+ E+QVA KR
Sbjct: 516 SGADAPK--ERVVPPSSKPPTNSLRIDRFLRPFTLKAVQELLAKTGTVS-----SFWMDHIKTHCYVTYSSVEEAKETRNALYNLQWPANGGRLLVAEFV----------DPQEVKMRA-----EAPPQSPAARP--PVSASPTTPS-----------------APSPFQSKPSPRQHVLREQLPPPPPLPPPPPLSNPPPARERLPLPPPPPLPSK---PDLPILTLDDLFKKTKAIPRIYYLPLSEEQVAAKR 726
BLAST of EWM21349.1 vs. NCBI_GenBank
Match: gi|1179554947|ref|XP_020697677.1| (actin cytoskeleton-regulatory complex protein PAN1 [Dendrobium catenatum]) HSP 1 Score: 95.1301 bits (235), Expect = 6.769e-17 Identity = 56/153 (36.60%), Postives = 81/153 (52.94%), Query Frame = 0
Query: 175 SPSSATVPSESAQSSDMAAAVTQKGHASPAPIDAEVKKGTGPSETALLAREESLSGADAPEPAAALVPAPKNPRSATIRVDGFIRPFRLVAAKEMLEERGGGPLVGEDGMWMDVIKTHCYATFQSEECAARARIALHKYQWPERGG-VLTADF 326
+P + VP + Q + A+T K +A P P ++ G S + L AD+P+ +VP PK P + ++R+D F+RPF L A +E+L + G WMD IKTHCY T+ S E AA R A++ QWP GG +L A+F
Sbjct: 590 NPETIKVPEQ--QIPHLNIAMTPKNNAQPTP-----RRTFGRSNSTL--------SADSPK--ERVVPTPKKPATTSLRIDNFLRPFTLKAVQELLAQTGNVC-----DFWMDHIKTHCYVTYSSVEEAAETRKAVYNIQWPPNGGRLLAAEF 720
BLAST of EWM21349.1 vs. NCBI_GenBank
Match: gi|743892142|ref|XP_011039562.1| (PREDICTED: apoptotic chromatin condensation inducer in the nucleus-like [Populus euphratica]) HSP 1 Score: 94.7449 bits (234), Expect = 8.851e-17 Identity = 90/308 (29.22%), Postives = 135/308 (43.83%), Query Frame = 0
Query: 178 SATVPSESAQSSDMAAAVTQKGHASPAPIDAEVKKGTGPSETALLAREESLSGADAPEPAAALVPAPKNPRSATIRVDGFIRPFRLVAAKEMLEERGGGPLVGEDGMWMDVIKTHCYATFQSEECAARARIALHKYQWPERGG-VLTADF-SPKTAAQVTEEDKLLKKARAASRLQEGGDKTGGARPGEPLAATPRTTALAAASAETQRVSNSLVPPPAPFEAPPHLGGAESGGSVRRKRELGPSPERIVRARRDAEGAKEAV------KEEEDEKPAMPTLEELFRSTSTPPKLYWTPVPEDQVARK 477
S VP + QSS++ T K PAP+ +R +S G +AP+ +VP + P + ++R+D F+RPF L A +E+L + G WMD IKTHCY + S E A R ++ QWP GG +L A+F P+ K R + P + LAA P T ++AA + L P P+P + V R++ P+ + A + A+E V E P + TL++LFR T T P++Y+ P+ E+QVA K
Sbjct: 437 SIKVPEQ--QSSNLTPTTTPKDGFQPAPLRRN------------FSRSDSSVGEEAPK--ERIVPPSQKPPTNSLRIDRFLRPFTLKAVQELLGKTGSVT-----SFWMDHIKTHCYVMYSSVEEAVETRNTIYNLQWPPNGGRLLVAEFVDPQEV-----------KIRVDA-------------PPQSLAA-PVTPSMAAPAPAPAPAPPMLQPQPSPRQ------------QVSRQQLPPPTSLPLPPALSNPPHARERVDLPPPPPLPEKHDPPIVTLDDLFRKTKTAPRIYYLPLSEEQVAAK 686
BLAST of EWM21349.1 vs. NCBI_GenBank
Match: gi|326526753|dbj|BAK00765.1| (predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 91.2781 bits (225), Expect = 1.108e-15 Identity = 76/263 (28.90%), Postives = 115/263 (43.73%), Query Frame = 0
Query: 222 LAREESLSGADAPEPAAALVPAPKNPRSATIRVDGFIRPFRLVAAKEMLEERGGGPLVGEDGMWMDVIKTHCYATFQSEECAARARIALHKYQW-PERGGVLTADFSPKTAAQVTEEDKLLKKARAASRL------QEGGDKTGGARPGEPL--AATPRTTALAAASAETQRVSNSLVPPPAPFEAPPHLGGAESGGSVRRKRELGPSPERIVRARRDAEGAKEAVKEEEDEKPAMPTLEELFRSTSTPPKLYWTPVPEDQVA 475
L R +S + D+P+ +VP + P + ++R+D F+RPF L A +E+L + G WMD IKTHCY TF S E A R A++ QW P G L A+F ++ E AA + +E + G A P AATPR A S+ PA GS R K L P+P++ +P + TL++LFR T + P++Y+ P+ +++V+
Sbjct: 516 LGRADSTASGDSPK--ERIVPPSQKPATTSLRIDRFVRPFTLRAVQELLGKTGSVC-----SFWMDHIKTHCYVTFSSVEEATATRDAVYNLQWPPNNGNYLLAEFVDPQEVKLKLEPPAPAATAAAVPISPATTPREAPFQQGQANQSVPCQAAATPREQLPPPAPLVKPPTSD-----PA--------------GSAREK--LPPTPKKA--------------------EPPVVTLDDLFRKTQSSPRIYYLPLSDEEVS 730
BLAST of EWM21349.1 vs. NCBI_GenBank
Match: gi|734400274|gb|KHN31348.1| (Apoptotic chromatin condensation inducer in the nucleus [Glycine soja]) HSP 1 Score: 90.5077 bits (223), Expect = 1.749e-15 Identity = 82/275 (29.82%), Postives = 114/275 (41.45%), Query Frame = 0
Query: 222 LAREESLSGADAPEPAAALVPAPKNPRSATIRVDGFIRPFRLVAAKEMLEERGGGPLVGEDGMWMDVIKTHCYATFQSEECAARARIALHKYQWPERGGVLTADFSPKTAAQVTEEDKLLKKARAASRLQEGGDKTGGARPGEPLAATPRTTALAAASAETQRVSNSLVPPPAPFEAP---PHLGGAESGGSVRRK------------RELGPS----PERIVRARRDAEGAKEAVKEEEDEKPAMPTLEELFRSTSTPPKLYWTPVPEDQVARK 477
+R +S + D P+ +VP P+ + ++R+D F+RPF L A +E+L + G WMD IKTHCY T+ S + A R A++ QWP GG L A V E+ +K EP P T AAS T R VPP PF P PHL + V RE PS PE++ P + TL++LFR T+ P++Y+ P+ E+QVA K
Sbjct: 489 FSRSDSSATDDTPK--ERIVPPPQRSPTNSLRIDRFLRPFTLKAVQELLGKTGNVS-----SFWMDQIKTHCYVTYSSVDEAIETRNAVYNLQWPPNGGRLLV------AEYVDPEEVKMKL--------------------EP----PPT---QAASDSTDRA----VPPAPPFSQPEPSPHLHREQHPVPVILPPPPPLSKPPPVARERLPSPPPLPEKV--------------------DPPIVTLDDLFRKTTATPRIYYLPLSEEQVASK 699
BLAST of EWM21349.1 vs. NCBI_GenBank
Match: gi|586668990|ref|XP_006836186.1| (apoptotic chromatin condensation inducer in the nucleus [Amborella trichopoda] >gi|548838686|gb|ERM99039.1| hypothetical protein AMTR_s00101p00067890 [Amborella trichopoda]) HSP 1 Score: 89.7373 bits (221), Expect = 3.106e-15 Identity = 46/107 (42.99%), Postives = 63/107 (58.88%), Query Frame = 0
Query: 221 LLAREESLSGADAPEPAAALVPAPKNPRSATIRVDGFIRPFRLVAAKEMLEERGGGPLVGEDGMWMDVIKTHCYATFQSEECAARARIALHKYQWPERGG-VLTADF 326
LL+R +S DAP+ +VP P+ + ++R+D F+RPF L A +E+L + G WMD IKTHCY T+ S E A R AL+ QWP GG +LTA+F
Sbjct: 465 LLSRSDSSVSEDAPK--ERVVPPPQRSPTTSLRIDRFLRPFTLKAVQELLAKTGTFC-----SFWMDHIKTHCYVTYSSVEEAVETRNALYNLQWPPNGGRLLTAEF 564
BLAST of EWM21349.1 vs. NCBI_GenBank
Match: gi|1002849632|ref|XP_015690989.1| (PREDICTED: fibrous sheath CABYR-binding protein-like isoform X1 [Oryza brachyantha] >gi|1002849634|ref|XP_015690990.1| PREDICTED: fibrous sheath CABYR-binding protein-like isoform X1 [Oryza brachyantha] >gi|1002849636|ref|XP_015690991.1| PREDICTED: fibrous sheath CABYR-binding protein-like isoform X1 [Oryza brachyantha]) HSP 1 Score: 87.4261 bits (215), Expect = 1.919e-14 Identity = 42/106 (39.62%), Postives = 60/106 (56.60%), Query Frame = 0
Query: 222 LAREESLSGADAPEPAAALVPAPKNPRSATIRVDGFIRPFRLVAAKEMLEERGGGPLVGEDGMWMDVIKTHCYATFQSEECAARARIALHKYQW-PERGGVLTADF 326
R +S + D+P+ +VP P+NP + ++R+D F+RPF L A +E+L + G WMD IKTHCY T+ S E A R A++ QW P G L A+F
Sbjct: 484 FGRSDSTASEDSPK--ERVVPPPQNPATTSLRIDRFVRPFTLKAVQELLGKTGSVC-----SFWMDHIKTHCYVTYSSLEEAVATRDAVYNLQWPPNNGNRLVAEF 582 The following BLAST results are available for this feature:
BLAST of EWM21349.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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