EWM21340.1, cds9329 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21340.1 vs. NCBI_GenBank
Match: gi|585101525|gb|EWM21340.1| (endonuclease [Nannochloropsis gaditana]) HSP 1 Score: 997.653 bits (2578), Expect = 0.000e+0 Identity = 491/491 (100.00%), Postives = 491/491 (100.00%), Query Frame = 0
Query: 1 MLSALPQQNLNIPTLSQYFRKRGRRMLLQGLRQYCSRGSHACGKRRRPCVVNRAQCSSAPRDELVHLLGPASGLSSCQWSNDEPREAMLPQPQYEGDWEIQAEEEDQQERIGAKDREGEDEGEEGGVFGGGQTPHRPGAFATDHATPAASRRSGADSYKESYQDEYWERPGIVQATSRCPALVLNQDLTPLTLFPLTIAPWWSAVRSTLRGRVSVLSSYDRGVRSTHALHQLPSVVALTRQQTPGQRRQAGALEGREGEAGCKAGGGRGEGDGERRFWPAARTPRPFRRNVALRDGYVCCFCGRRLSYRTLTLDHVVPRCLGGEDSWENLASACRQCNSRKGSLLVSELGRIDMRLLRVPYAPTALQLAYAYVDLLPAAILNQWGRYLEGPLAREAAKVSALHATFSLPTPHPTPPSFSKSGAQSAPGGSHTPCSVADDGPRPRNLVDVSPLPRTEARKEQCQPRMKTEEGGEDGGYGLSAPRGPLAWSTH 491
MLSALPQQNLNIPTLSQYFRKRGRRMLLQGLRQYCSRGSHACGKRRRPCVVNRAQCSSAPRDELVHLLGPASGLSSCQWSNDEPREAMLPQPQYEGDWEIQAEEEDQQERIGAKDREGEDEGEEGGVFGGGQTPHRPGAFATDHATPAASRRSGADSYKESYQDEYWERPGIVQATSRCPALVLNQDLTPLTLFPLTIAPWWSAVRSTLRGRVSVLSSYDRGVRSTHALHQLPSVVALTRQQTPGQRRQAGALEGREGEAGCKAGGGRGEGDGERRFWPAARTPRPFRRNVALRDGYVCCFCGRRLSYRTLTLDHVVPRCLGGEDSWENLASACRQCNSRKGSLLVSELGRIDMRLLRVPYAPTALQLAYAYVDLLPAAILNQWGRYLEGPLAREAAKVSALHATFSLPTPHPTPPSFSKSGAQSAPGGSHTPCSVADDGPRPRNLVDVSPLPRTEARKEQCQPRMKTEEGGEDGGYGLSAPRGPLAWSTH
Sbjct: 1 MLSALPQQNLNIPTLSQYFRKRGRRMLLQGLRQYCSRGSHACGKRRRPCVVNRAQCSSAPRDELVHLLGPASGLSSCQWSNDEPREAMLPQPQYEGDWEIQAEEEDQQERIGAKDREGEDEGEEGGVFGGGQTPHRPGAFATDHATPAASRRSGADSYKESYQDEYWERPGIVQATSRCPALVLNQDLTPLTLFPLTIAPWWSAVRSTLRGRVSVLSSYDRGVRSTHALHQLPSVVALTRQQTPGQRRQAGALEGREGEAGCKAGGGRGEGDGERRFWPAARTPRPFRRNVALRDGYVCCFCGRRLSYRTLTLDHVVPRCLGGEDSWENLASACRQCNSRKGSLLVSELGRIDMRLLRVPYAPTALQLAYAYVDLLPAAILNQWGRYLEGPLAREAAKVSALHATFSLPTPHPTPPSFSKSGAQSAPGGSHTPCSVADDGPRPRNLVDVSPLPRTEARKEQCQPRMKTEEGGEDGGYGLSAPRGPLAWSTH 491
BLAST of EWM21340.1 vs. NCBI_GenBank
Match: gi|546323611|ref|XP_005718133.1| (unnamed protein product [Chondrus crispus] >gi|507114712|emb|CDF38248.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 140.198 bits (352), Expect = 1.993e-34 Identity = 78/211 (36.97%), Postives = 113/211 (53.55%), Query Frame = 0
Query: 179 CPALVLNQDLTPLTLFPLTIAPWWSAVRSTLRGRVSVLSSYDRGVRSTHALHQLPSVVALTRQQTPGQRRQAGALEGREGEAGCKAGGGRGEGDGERRFWPAARTPRPFRRNVALRDGYVCCFCGRRLSYRTLTLDHVVPRCLGGEDSWENLASACRQCNSRKGSLLVSELGRIDMRLLRVPYAPTALQLAYAYVDLLPAAILNQ-WGRYL 388
CPALVLN D +PL+ PL++ PW A+++ RV+V+++YD GVRS + LPSV++L + Q ++R A + R NV +RD + C +CGRR + LT DHV+PRC GG+ +W+N+ +AC CN KG L+ EL M+LLR+P+ PT QL A L P L++ W Y+
Sbjct: 94 CPALVLNADFSPLSYMPLSLWPWQDAIKAVFLDRVTVVATYDIGVRSPGMIFPLPSVISLKQYQPRARKRPAFS-----------------------------------RFNVFMRDAFSCQYCGRRFPTQELTFDHVIPRCAGGKTNWQNVVTACIGCNHSKGRYLLHELK--HMKLLRMPHEPTNGQLQ-ARARLFPPRYLHESWRDYV 266
BLAST of EWM21340.1 vs. NCBI_GenBank
Match: gi|1180179804|ref|WP_083699156.1| (HNH endonuclease [Rhodocista sp. MIMtkB3]) HSP 1 Score: 133.65 bits (335), Expect = 1.017e-32 Identity = 77/210 (36.67%), Postives = 105/210 (50.00%), Query Frame = 0
Query: 179 CPALVLNQDLTPLTLFPLTIAPWWSAVRSTLRGRVSVLSSYDRGVRSTHALHQLPSVVALTRQQTPGQRRQAGALEGREGEAGCKAGGGRGEGDGERRFWPAARTPRPFRRNVALRDGYVCCFCGRRLSYRTLTLDHVVPRCLGGEDSWENLASACRQCNSRKGSLLVSELGRIDMRLLRVPYAPTALQLAYAYVDLLPAAILNQWGRYL 388
CPALVLN D PL+ FPL++ W AV++ RV+++S YDR VRS +A +LPSV++L + + PA R P R NV LRD + C +CGR + LT DHV+PRC GG SWEN+ ++C CN KGS L ++ G M L+ P+ PTA +L P + W +L
Sbjct: 35 CPALVLNADFRPLSYFPLSLWSWQEAVKAVFLDRVNIISVYDRTVRSPNAEIRLPSVISL------------------------------------KEYIPATRKPAFTRFNVFLRDSFTCQYCGRSFPTQELTFDHVIPRCRGGRTSWENVVTSCSACNLLKGSRLPNQCG---MHPLQPPFQPTAYELQENGRSFPPNFLHESWRDFL 205
BLAST of EWM21340.1 vs. NCBI_GenBank
Match: gi|1176545111|ref|WP_082372102.1| (hypothetical protein [alpha proteobacterium AAP38]) HSP 1 Score: 131.724 bits (330), Expect = 2.218e-31 Identity = 75/210 (35.71%), Postives = 105/210 (50.00%), Query Frame = 0
Query: 179 CPALVLNQDLTPLTLFPLTIAPWWSAVRSTLRGRVSVLSSYDRGVRSTHALHQLPSVVALTRQQTPGQRRQAGALEGREGEAGCKAGGGRGEGDGERRFWPAARTPRPFRRNVALRDGYVCCFCGRRLSYRTLTLDHVVPRCLGGEDSWENLASACRQCNSRKGSLLVSELGRIDMRLLRVPYAPTALQLAYAYVDLLPAAILNQWGRYL 388
CPALVLN D PL+ FPL++ W AV++ RV+++S YDR VRS +LPSV++L + + PA R P R NV LRD + C +CGR LT DHV+PRC GG SW+N+ ++C CN KGS L ++ G M ++ P+APTA +L + P + + W +L
Sbjct: 67 CPALVLNADFRPLSYFPLSLWSWQDAVKAVFLDRVNIVSHYDRVVRSPQLAIRLPSVISL------------------------------------KEYVPATRRPAFTRFNVFLRDRFTCQYCGRWFPTHELTFDHVIPRCRGGRTSWDNVVTSCSACNLVKGSRLPNQCG---MHPMQEPFAPTAYELQENGRNFPPTFLHDSWRDFL 237
BLAST of EWM21340.1 vs. NCBI_GenBank
Match: gi|585110977|gb|EWM28559.1| (hnh endonuclease [Nannochloropsis gaditana]) HSP 1 Score: 135.576 bits (340), Expect = 2.799e-31 Identity = 84/223 (37.67%), Postives = 108/223 (48.43%), Query Frame = 0
Query: 172 IVQATSRCPALVLNQDLTPLTLFPLTIAPWWSAVRSTLRGRVSVLSSYDRGVRSTHALHQLPSVVALTRQQTPGQRRQAGALEGREGEAGCKAGGGRGEGDGERRFWPAARTPRPFRRNVALRDGYVCCFCGRRLSYRTLTLDHVVPRCLGGEDSWENLASACRQCNSRKGSLLVSELGRIDMRLLRVPYAPTALQL---AYAYVDLLPAAILNQWGRYLEGP 391
+++ T + P LVLN D PL+ PL+I W A+++ RV+VL+ YD ++ST QLPSVV L + Q GC+ R P RRN+ +RD Y C +C +RLS LTLDHV+PR GG+ SW+NL + CRQCN RKG V EL I M LL P P +L A Y W YL GP
Sbjct: 264 LLRQTGKYPVLVLNTDAQPLSYLPLSIIRWQEAIKAIFLERVTVLAYYDSYIQSTAGPWQLPSVVCLKQYQ-----------------KGCRE-----------------RPPPLNRRNIYIRDRYSCAYCSQRLSAHDLTLDHVMPRSKGGKGSWDNLVTCCRQCNRRKGKRTVKELKEIGMVLLNPPRKPKMSELQRQARLYRTAAGVFPHESWETYLGGP 452
BLAST of EWM21340.1 vs. NCBI_GenBank
Match: gi|545714109|ref|XP_005709357.1| (HNH endonuclease family protein [Galdieria sulphuraria] >gi|452825842|gb|EME32837.1| HNH endonuclease family protein [Galdieria sulphuraria]) HSP 1 Score: 130.183 bits (326), Expect = 1.556e-30 Identity = 76/212 (35.85%), Postives = 102/212 (48.11%), Query Frame = 0
Query: 180 PALVLNQDLTPLTLFPLTIAPWWSAVRSTLRGRVSVLSSYDRGVRSTHALHQLPSVVALTRQQTPGQRRQAGALEGREGEAGCKAGGGRGEGDGERRFWPAARTPRPFRRNVALRDGYVCCFCGRRLSYRTLTLDHVVPRCLGGEDSWENLASACRQCNSRKGSLLVSELGRIDMRLLRVPYAPTALQLAYAYVDLLPAAILNQWGRYLEGP 391
P LVLN D P++ +PL++ PW+ +++ L +V VL +Y++ +RS +LPSVVAL RR G R P R NV LRD + C +CG+R L+ DH+VPR GG W N+ +AC QCN +KG+ LV E DMRLLR P +PT +L L P W YL P
Sbjct: 129 PTLVLNADFQPVSYYPLSLWPWYETIKAVLLEKVVVLETYEKTIRSPSLSLKLPSVVALKEF-----RRMTG------------------------------RQPIFTRFNVFLRDDFACQYCGKRYRSVDLSFDHIVPRSKGGHSCWTNVVTACFQCNFKKGNRLVEETK--DMRLLRYPRSPTFYELQVKAQKLSPKISHTTWNAYLMLP 303
BLAST of EWM21340.1 vs. NCBI_GenBank
Match: gi|972370024|ref|WP_059024320.1| (HNH endonuclease [Acetobacter ghanensis] >gi|971146139|emb|CEF57010.1| HNH endonuclease [Acetobacter ghanensis]) HSP 1 Score: 125.561 bits (314), Expect = 4.239e-30 Identity = 79/214 (36.92%), Postives = 102/214 (47.66%), Query Frame = 0
Query: 175 ATSRCPALVLNQDLTPLTLFPLTIAPWWSAVRSTLRGRVSVLSSYDRGVRSTHALHQLPSVVALTRQQTPGQRRQAGALEGREGEAGCKAGGGRGEGDGERRFWPAARTPRPFRRNVALRDGYVCCFCGRRLSYRTLTLDHVVPRCLGGEDSWENLASACRQCNSRKGSLLVSELGRIDMRLLRVPYAPTALQLAYAYVDLLPAAILNQWGRYL 388
+T PALVLN D PL+ FPL++ PW A+++ RVSVLS YD V S + +LPSV+AL + + PAAR P R NV LRD + C +CG R + LT DHV+PRC GG SWEN+ +AC CN RKG + +G M R P PT+ +L P + W YL
Sbjct: 5 STLNYPALVLNADFRPLSYFPLSLWPWQDAIKAVCLDRVSVLSEYDMEVHSPNQAFRLPSVIAL------------------------------------KDYVPAARKPAFTRFNVFLRDNFSCQYCGERHPTQELTFDHVIPRCKGGRTSWENVVTACGCCNLRKGPHMPHHIG---MLPRRTPVRPTSWELQENGRAFPPNYLHKSWRDYL 179
BLAST of EWM21340.1 vs. NCBI_GenBank
Match: gi|889828012|ref|WP_048854330.1| (HNH endonuclease [Acetobacter syzygii] >gi|775231041|dbj|GAN71655.1| endonuclease [Acetobacter syzygii 9H-2]) HSP 1 Score: 125.176 bits (313), Expect = 5.814e-30 Identity = 78/214 (36.45%), Postives = 103/214 (48.13%), Query Frame = 0
Query: 175 ATSRCPALVLNQDLTPLTLFPLTIAPWWSAVRSTLRGRVSVLSSYDRGVRSTHALHQLPSVVALTRQQTPGQRRQAGALEGREGEAGCKAGGGRGEGDGERRFWPAARTPRPFRRNVALRDGYVCCFCGRRLSYRTLTLDHVVPRCLGGEDSWENLASACRQCNSRKGSLLVSELGRIDMRLLRVPYAPTALQLAYAYVDLLPAAILNQWGRYL 388
+T PALVLN D PL+ FPL++ PW A+++ RVSVLS YD V S + +LPSV+AL + + PAAR P R NV LRD + C +CG++ + LT DHV+PRC GG SWEN+ +AC CN RKG + +G M R P PT+ +L P + W YL
Sbjct: 5 STLNYPALVLNADFRPLSYFPLSLWPWQDAIKAVCLDRVSVLSEYDMEVHSPNQAFRLPSVIAL------------------------------------KDYIPAARKPAFTRFNVFLRDNFSCQYCGKQHPTQELTFDHVIPRCKGGRTSWENVVTACGCCNLRKGPHMPHHIG---MLPRRTPVRPTSWELQENGRAFPPNYLHKSWRDYL 179
BLAST of EWM21340.1 vs. NCBI_GenBank
Match: gi|1200409077|gb|OUV26490.1| (HNH endonuclease [Alphaproteobacteria bacterium TMED109]) HSP 1 Score: 124.79 bits (312), Expect = 8.225e-30 Identity = 62/209 (29.67%), Postives = 107/209 (51.20%), Query Frame = 0
Query: 180 PALVLNQDLTPLTLFPLTIAPWWSAVRSTLRGRVSVLSSYDRGVRSTHALHQLPSVVALTRQQTPGQRRQAGALEGREGEAGCKAGGGRGEGDGERRFWPAARTPRPFRRNVALRDGYVCCFCGRRLSYRTLTLDHVVPRCLGGEDSWENLASACRQCNSRKGSLLVSELGRIDMRLLRVPYAPTALQLAYAYVDLLPAAILNQWGRYL 388
PAL+LN D P++ FPL++ W ++++ RV++++ Y+ VRS++ ++PSV+AL +++ P ++ P R N+ LRD + C +CG + LT DHV+P+ GG+ WEN+ +AC +CN +K LL+SE ++M+L++ P+ P+ QL + P + W YL
Sbjct: 5 PALILNADYQPISYFPLSLWSWQDSIKAVFLERVNIIAEYESEVRSSNFSMKIPSVIAL------------------------------------KKYIPISKKPPFTRFNLFLRDDFSCQYCGDIFTSNDLTFDHVIPKSKGGKTKWENVVAACSKCNLKKSDLLLSE---VNMKLIKQPFTPSNQQLQVSGKKFPPNYLHKSWMDYL 174
BLAST of EWM21340.1 vs. NCBI_GenBank
Match: gi|916936239|ref|WP_051542951.1| (HNH endonuclease [Acetobacter papayae]) HSP 1 Score: 124.02 bits (310), Expect = 2.147e-29 Identity = 79/214 (36.92%), Postives = 102/214 (47.66%), Query Frame = 0
Query: 175 ATSRCPALVLNQDLTPLTLFPLTIAPWWSAVRSTLRGRVSVLSSYDRGVRSTHALHQLPSVVALTRQQTPGQRRQAGALEGREGEAGCKAGGGRGEGDGERRFWPAARTPRPFRRNVALRDGYVCCFCGRRLSYRTLTLDHVVPRCLGGEDSWENLASACRQCNSRKGSLLVSELGRIDMRLLRVPYAPTALQLAYAYVDLLPAAILNQWGRYL 388
+T PALVLN D PL+ FPL++ W A+++ RVSVL+ YD VRS +LPSV+AL + F PAAR P R NV LRD + C +CG R + LT DHV+PRC GG SWEN+ +AC CN RKG + ++G I R P PT+ +L P + W YL
Sbjct: 11 STLNFPALVLNADFRPLSYFPLSLWSWQDAIKAVCLDRVSVLNEYDVEVRSPRQTFRLPSVIAL------------------------------------KDFIPAARKPAFTRFNVFLRDNFSCQYCGERYPTQELTFDHVIPRCKGGRTSWENVVTACGCCNLRKGPHMPQKIGMIPR---RPPARPTSWELQENGRAFPPNYLHKSWCDYL 185 The following BLAST results are available for this feature:
BLAST of EWM21340.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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