EWM21345.1, cds9327 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21345.1 vs. NCBI_GenBank
Match: gi|585101530|gb|EWM21345.1| (hypothetical protein Naga_100075g19 [Nannochloropsis gaditana]) HSP 1 Score: 351.288 bits (900), Expect = 1.440e-122 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
Query: 1 MTCRKLNRLATQVAKLTSPLPAAYKPWGYTLAFDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPKLRKGKS 170
MTCRKLNRLATQVAKLTSPLPAAYKPWGYTLAFDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPKLRKGKS
Sbjct: 1 MTCRKLNRLATQVAKLTSPLPAAYKPWGYTLAFDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPKLRKGKS 170
BLAST of EWM21345.1 vs. NCBI_GenBank
Match: gi|397614298|gb|EJK62712.1| (hypothetical protein THAOC_16666 [Thalassiosira oceanica]) HSP 1 Score: 202.601 bits (514), Expect = 6.806e-64 Identity = 94/165 (56.97%), Postives = 125/165 (75.76%), Query Frame = 0
Query: 5 KLNRLATQVAKLTSPLPAAYKPWGYTLAFDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPKLRKGK 169
KLN++A+ + ++ S LP + P+ + F+ MVKLAGTA + ++E+S K+A + L N RRVQNHIGG+HAC MALAAESATGI++GMNVPD+ LPL K+MKV+FVRRC+GDI+A A L++E +I+ E+KG+V V V D SG PI AEM+WAWV K RK K
Sbjct: 4 KLNKMASTIQRIQSTLPESMHPFANSFLFNNMVKLAGTAGIRIDELSHKKATISLANARRVQNHIGGLHACSMALAAESATGILIGMNVPDTHLPLIKTMKVDFVRRCKGDIRAEATLSDEDYRRIHEEDKGEVWVPCTVVDESGNEPIKAEMLWAWVAKRRKSK 168
BLAST of EWM21345.1 vs. NCBI_GenBank
Match: gi|298709352|emb|CBJ31287.1| (conserved unknown protein [Ectocarpus siliculosus] >gi|298714289|emb|CBJ27405.1| conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 184.496 bits (467), Expect = 1.583e-56 Identity = 89/135 (65.93%), Postives = 105/135 (77.78%), Query Frame = 0
Query: 33 FDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPKLRK 167
F VKLAGTA + VEE++ R+VV + N RRVQNHIG +HACGMALAAESATGI+VGM+VPDS LPLCKSM ++F R +GD+ AVA L+EEQLT + +EKG+ V V VTD SGK PI AE VWAWVPK RK
Sbjct: 44 FAFQVKLAGTAGVRVEELTPHRSVVKVANVRRVQNHIGSVHACGMALAAESATGILVGMSVPDSRLPLCKSMAIDFTRLSQGDVTAVAELSEEQLTAVRDQEKGEANVQVTVTDESGKEPIRAEFVWAWVPKRRK 178
BLAST of EWM21345.1 vs. NCBI_GenBank
Match: gi|1173928628|gb|OQR82173.1| (hypothetical protein THRCLA_11093 [Thraustotheca clavata]) HSP 1 Score: 179.104 bits (453), Expect = 1.269e-54 Identity = 86/160 (53.75%), Postives = 118/160 (73.75%), Query Frame = 0
Query: 6 LNRLATQVAKLT-SPLPAAYKPWGYTLAFDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPK 164
+N+L+T VAK+ S LP+ + + AF+ VK+AG + + ++ ++D +++V LKN RVQNHIGG+HACGMAL AESA+G+V GMNV DS LPL KSM + +V+R +GD+KA+A LT+ Q +I S +KGDVLV V +TD G SP+ AEM WAWVPK
Sbjct: 5 VNKLSTLVAKINGSSLPSFLRQAALSTAFNAQVKMAGVSGIHIKSLTDSQSIVKLKNTFRVQNHIGGVHACGMALLAESASGMVFGMNVKDSHLPLLKSMSMKYVKRAKGDLKAIATLTDAQRNEILSADKGDVLVNVVLTDEDGNSPVEAEMCWAWVPK 164
BLAST of EWM21345.1 vs. NCBI_GenBank
Match: gi|698813326|ref|XP_009839692.1| (hypothetical protein H257_13746 [Aphanomyces astaci] >gi|574105505|gb|ETV71029.1| hypothetical protein H257_13746 [Aphanomyces astaci]) HSP 1 Score: 179.104 bits (453), Expect = 1.490e-54 Identity = 85/164 (51.83%), Postives = 118/164 (71.95%), Query Frame = 0
Query: 7 NRLATQVAKLT-SPLPAAYKPWGYTLAFDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPKLRKGK 169
N+LA VAK+ S LP+ + +LAF+ VK+AG A + +E +++ ++V+HLKNR RVQNHIGG+HACGMAL AESA+G+V G+NV D+ LPL KSM +N+V+R GD+KAVA LT EQ I ++KG+++V V +TD G+ P+ +M WAW PK R K
Sbjct: 5 NKLAGLVAKINQSGLPSFLRESALSLAFNSQVKMAGVAGIHIESLTESQSVLHLKNRFRVQNHIGGVHACGMALLAESASGVVFGVNVKDTHLPLLKSMSINYVKRAHGDLKAVATLTPEQREAIQRDDKGNLVVDVVLTDEKGEQPVECQMTWAWTPKKRSTK 168
BLAST of EWM21345.1 vs. NCBI_GenBank
Match: gi|1173926766|gb|OQR80918.1| (hypothetical protein ACHHYP_17064 [Achlya hypogyna]) HSP 1 Score: 178.718 bits (452), Expect = 2.030e-54 Identity = 88/160 (55.00%), Postives = 118/160 (73.75%), Query Frame = 0
Query: 6 LNRLATQVAKLT-SPLPAAYKPWGYTLAFDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPK 164
+N+L VAK+ S LP+ + + AF+ VK+AG A + VE ++++++VV LKN RVQNHIGG+HACGMAL AESA+G+V GMNV DS LPL KSM +N+V+R +GD+KA+A LT+ Q +I E+KG+VLV V VTDS+G SP+ EM W WVPK
Sbjct: 5 VNKLGKIVAKINGSGLPSFLRESALSTAFNAQVKMAGVAGIHVESLTEQQSVVSLKNTFRVQNHIGGVHACGMALLAESASGMVFGMNVRDSHLPLLKSMSMNYVKRAKGDLKAIATLTDAQRNEIAKEDKGEVLVNVVVTDSAGDSPVECEMRWVWVPK 164
BLAST of EWM21345.1 vs. NCBI_GenBank
Match: gi|1176038185|gb|OQX35543.1| (DUF4442 domain-containing protein [Oceanospirillales bacterium LUC14_002_19_P2]) HSP 1 Score: 177.948 bits (450), Expect = 4.005e-54 Identity = 83/160 (51.88%), Postives = 111/160 (69.38%), Query Frame = 0
Query: 7 NRLATQVAKLTSPLPAAYKPWGYTLAFDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPKLR 166
NRL+ VAK T P + W T F +K AGTA++ + +S + + + +KNR+RVQNHIG +HAC MAL AESATG +VGMNVPD +P+ KSM +++V+R GD+ AVAHLT+EQ+ +I + EKG+V VAV +TD G PI AEM+W W PK R
Sbjct: 6 NRLSRIVAK-TQKAPPFMQSWLLTKVFGTAIKFAGTAKVDIHHLSHQESRLTIKNRKRVQNHIGSVHACAMALLAESATGYIVGMNVPDDRVPVIKSMHIDYVKRATGDLHAVAHLTDEQIQQIQTTEKGEVTVAVTITDEKGVEPIKAEMIWTWTPKRR 164
BLAST of EWM21345.1 vs. NCBI_GenBank
Match: gi|521074338|ref|WP_020405245.1| (DUF4442 domain-containing protein [Hahella ganghwensis]) HSP 1 Score: 176.792 bits (447), Expect = 8.550e-54 Identity = 83/162 (51.23%), Postives = 114/162 (70.37%), Query Frame = 0
Query: 5 KLNRLATQVAKLTSPLPAAYKPWGYTLAFDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPKLR 166
+LNR+ +++ + LP + T F VK GTA VEE+SD+R VV LKNR+RVQNHIG +HA AL AE+ATG VVGMN+PDS++P+ K+MK+++V+R GD++A A LTEEQ+ I ++EKG++ VAV +TD+ K P+ AEMVWAW P R
Sbjct: 3 QLNRIVSKI----NLLPRFARSRALTTFFGKTVKFVGTANATVEELSDQRCVVTLKNRKRVQNHIGSVHAVANALIAETATGFVVGMNIPDSSVPVIKTMKLDYVKRSTGDMRAEARLTEEQVEAIRTQEKGEITVAVSITDAENKEPVLAEMVWAWTPNRR 160
BLAST of EWM21345.1 vs. NCBI_GenBank
Match: gi|940383426|ref|WP_054978199.1| (DUF4442 domain-containing protein [Pseudoalteromonas sp. P1-9] >gi|939939053|gb|KPV98026.1| hypothetical protein AN214_00412 [Pseudoalteromonas sp. P1-9]) HSP 1 Score: 176.407 bits (446), Expect = 1.608e-53 Identity = 89/165 (53.94%), Postives = 114/165 (69.09%), Query Frame = 0
Query: 3 CRKLNRLATQVAKLTSPLPAAYKPWGYTLAFDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPKLRK 167
KL++L ++ KL P + + T F VK AGTA+L V +S+ + VV L N++RVQNHIGGIHA G ALAAESA+GIV GMNVPDS LPL KSM + + +R +GDI A A L+ E +T INS+EKGD++V V ++D SG SPI EM WAWVPK R+
Sbjct: 2 ANKLSKLVNKIYKL----PKSTHEFLLTKLFTSQVKFAGTAKLRVLSISNDKVVVKLANKKRVQNHIGGIHAVGAALAAESASGIVFGMNVPDSHLPLLKSMTLEYNKRMQGDITATAQLSSEVITAINSDEKGDLIVPVVLSDESGNSPIHCEMRWAWVPKKRR 162
BLAST of EWM21345.1 vs. NCBI_GenBank
Match: gi|669139510|ref|XP_008605323.1| (hypothetical protein SDRG_01568 [Saprolegnia diclina VS20] >gi|530743367|gb|EQC41609.1| hypothetical protein SDRG_01568 [Saprolegnia diclina VS20]) HSP 1 Score: 174.481 bits (441), Expect = 7.635e-53 Identity = 87/160 (54.37%), Postives = 117/160 (73.12%), Query Frame = 0
Query: 6 LNRLATQVAKL-TSPLPAAYKPWGYTLAFDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPK 164
+N+L VAK+ +S PA + + AF+ VK+AG A + VE ++++++VV LKN RVQNHIGG+HACGMAL AESA+G+V GMNV DS LPL KSM +++V+R +GD+KAVA LT+ Q +I +KG+VLV V VTDS+G SP+ EM W WVPK
Sbjct: 5 VNKLGKLVAKINSSSAPAFLREGALSTAFNAQVKMAGVAGIHVETLTEQKSVVSLKNSFRVQNHIGGVHACGMALLAESASGMVFGMNVRDSHLPLLKSMSMSYVKRAKGDLKAVATLTDAQRDEIAKSDKGEVLVNVVVTDSAGDSPVECEMRWVWVPK 164 The following BLAST results are available for this feature:
BLAST of EWM21345.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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