EWM21345.1, cds9327 (CDS) Nannochloropsis gaditana

Overview
NameEWM21345.1
Unique Namecds9327
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:52677..52784 +
Alignment locationKK037253.1:52906..53310 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21345.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100075g19.2879.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:52677..52784 +
KK037253.1supercontigKK037253.1:52906..53310 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR027961DUF4442
IPR029069HotDog_dom
Homology
BLAST of EWM21345.1 vs. NCBI_GenBank
Match: gi|585101530|gb|EWM21345.1| (hypothetical protein Naga_100075g19 [Nannochloropsis gaditana])

HSP 1 Score: 351.288 bits (900), Expect = 1.440e-122
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
Query:    1 MTCRKLNRLATQVAKLTSPLPAAYKPWGYTLAFDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPKLRKGKS 170
            MTCRKLNRLATQVAKLTSPLPAAYKPWGYTLAFDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPKLRKGKS
Sbjct:    1 MTCRKLNRLATQVAKLTSPLPAAYKPWGYTLAFDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPKLRKGKS 170          
BLAST of EWM21345.1 vs. NCBI_GenBank
Match: gi|397614298|gb|EJK62712.1| (hypothetical protein THAOC_16666 [Thalassiosira oceanica])

HSP 1 Score: 202.601 bits (514), Expect = 6.806e-64
Identity = 94/165 (56.97%), Postives = 125/165 (75.76%), Query Frame = 0
Query:    5 KLNRLATQVAKLTSPLPAAYKPWGYTLAFDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPKLRKGK 169
            KLN++A+ + ++ S LP +  P+  +  F+ MVKLAGTA + ++E+S K+A + L N RRVQNHIGG+HAC MALAAESATGI++GMNVPD+ LPL K+MKV+FVRRC+GDI+A A L++E   +I+ E+KG+V V   V D SG  PI AEM+WAWV K RK K
Sbjct:    4 KLNKMASTIQRIQSTLPESMHPFANSFLFNNMVKLAGTAGIRIDELSHKKATISLANARRVQNHIGGLHACSMALAAESATGILIGMNVPDTHLPLIKTMKVDFVRRCKGDIRAEATLSDEDYRRIHEEDKGEVWVPCTVVDESGNEPIKAEMLWAWVAKRRKSK 168          
BLAST of EWM21345.1 vs. NCBI_GenBank
Match: gi|298709352|emb|CBJ31287.1| (conserved unknown protein [Ectocarpus siliculosus] >gi|298714289|emb|CBJ27405.1| conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 184.496 bits (467), Expect = 1.583e-56
Identity = 89/135 (65.93%), Postives = 105/135 (77.78%), Query Frame = 0
Query:   33 FDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPKLRK 167
            F   VKLAGTA + VEE++  R+VV + N RRVQNHIG +HACGMALAAESATGI+VGM+VPDS LPLCKSM ++F R  +GD+ AVA L+EEQLT +  +EKG+  V V VTD SGK PI AE VWAWVPK RK
Sbjct:   44 FAFQVKLAGTAGVRVEELTPHRSVVKVANVRRVQNHIGSVHACGMALAAESATGILVGMSVPDSRLPLCKSMAIDFTRLSQGDVTAVAELSEEQLTAVRDQEKGEANVQVTVTDESGKEPIRAEFVWAWVPKRRK 178          
BLAST of EWM21345.1 vs. NCBI_GenBank
Match: gi|1173928628|gb|OQR82173.1| (hypothetical protein THRCLA_11093 [Thraustotheca clavata])

HSP 1 Score: 179.104 bits (453), Expect = 1.269e-54
Identity = 86/160 (53.75%), Postives = 118/160 (73.75%), Query Frame = 0
Query:    6 LNRLATQVAKLT-SPLPAAYKPWGYTLAFDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPK 164
            +N+L+T VAK+  S LP+  +    + AF+  VK+AG + + ++ ++D +++V LKN  RVQNHIGG+HACGMAL AESA+G+V GMNV DS LPL KSM + +V+R +GD+KA+A LT+ Q  +I S +KGDVLV V +TD  G SP+ AEM WAWVPK
Sbjct:    5 VNKLSTLVAKINGSSLPSFLRQAALSTAFNAQVKMAGVSGIHIKSLTDSQSIVKLKNTFRVQNHIGGVHACGMALLAESASGMVFGMNVKDSHLPLLKSMSMKYVKRAKGDLKAIATLTDAQRNEILSADKGDVLVNVVLTDEDGNSPVEAEMCWAWVPK 164          
BLAST of EWM21345.1 vs. NCBI_GenBank
Match: gi|698813326|ref|XP_009839692.1| (hypothetical protein H257_13746 [Aphanomyces astaci] >gi|574105505|gb|ETV71029.1| hypothetical protein H257_13746 [Aphanomyces astaci])

HSP 1 Score: 179.104 bits (453), Expect = 1.490e-54
Identity = 85/164 (51.83%), Postives = 118/164 (71.95%), Query Frame = 0
Query:    7 NRLATQVAKLT-SPLPAAYKPWGYTLAFDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPKLRKGK 169
            N+LA  VAK+  S LP+  +    +LAF+  VK+AG A + +E +++ ++V+HLKNR RVQNHIGG+HACGMAL AESA+G+V G+NV D+ LPL KSM +N+V+R  GD+KAVA LT EQ   I  ++KG+++V V +TD  G+ P+  +M WAW PK R  K
Sbjct:    5 NKLAGLVAKINQSGLPSFLRESALSLAFNSQVKMAGVAGIHIESLTESQSVLHLKNRFRVQNHIGGVHACGMALLAESASGVVFGVNVKDTHLPLLKSMSINYVKRAHGDLKAVATLTPEQREAIQRDDKGNLVVDVVLTDEKGEQPVECQMTWAWTPKKRSTK 168          
BLAST of EWM21345.1 vs. NCBI_GenBank
Match: gi|1173926766|gb|OQR80918.1| (hypothetical protein ACHHYP_17064 [Achlya hypogyna])

HSP 1 Score: 178.718 bits (452), Expect = 2.030e-54
Identity = 88/160 (55.00%), Postives = 118/160 (73.75%), Query Frame = 0
Query:    6 LNRLATQVAKLT-SPLPAAYKPWGYTLAFDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPK 164
            +N+L   VAK+  S LP+  +    + AF+  VK+AG A + VE ++++++VV LKN  RVQNHIGG+HACGMAL AESA+G+V GMNV DS LPL KSM +N+V+R +GD+KA+A LT+ Q  +I  E+KG+VLV V VTDS+G SP+  EM W WVPK
Sbjct:    5 VNKLGKIVAKINGSGLPSFLRESALSTAFNAQVKMAGVAGIHVESLTEQQSVVSLKNTFRVQNHIGGVHACGMALLAESASGMVFGMNVRDSHLPLLKSMSMNYVKRAKGDLKAIATLTDAQRNEIAKEDKGEVLVNVVVTDSAGDSPVECEMRWVWVPK 164          
BLAST of EWM21345.1 vs. NCBI_GenBank
Match: gi|1176038185|gb|OQX35543.1| (DUF4442 domain-containing protein [Oceanospirillales bacterium LUC14_002_19_P2])

HSP 1 Score: 177.948 bits (450), Expect = 4.005e-54
Identity = 83/160 (51.88%), Postives = 111/160 (69.38%), Query Frame = 0
Query:    7 NRLATQVAKLTSPLPAAYKPWGYTLAFDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPKLR 166
            NRL+  VAK T   P   + W  T  F   +K AGTA++ +  +S + + + +KNR+RVQNHIG +HAC MAL AESATG +VGMNVPD  +P+ KSM +++V+R  GD+ AVAHLT+EQ+ +I + EKG+V VAV +TD  G  PI AEM+W W PK R
Sbjct:    6 NRLSRIVAK-TQKAPPFMQSWLLTKVFGTAIKFAGTAKVDIHHLSHQESRLTIKNRKRVQNHIGSVHACAMALLAESATGYIVGMNVPDDRVPVIKSMHIDYVKRATGDLHAVAHLTDEQIQQIQTTEKGEVTVAVTITDEKGVEPIKAEMIWTWTPKRR 164          
BLAST of EWM21345.1 vs. NCBI_GenBank
Match: gi|521074338|ref|WP_020405245.1| (DUF4442 domain-containing protein [Hahella ganghwensis])

HSP 1 Score: 176.792 bits (447), Expect = 8.550e-54
Identity = 83/162 (51.23%), Postives = 114/162 (70.37%), Query Frame = 0
Query:    5 KLNRLATQVAKLTSPLPAAYKPWGYTLAFDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPKLR 166
            +LNR+ +++    + LP   +    T  F   VK  GTA   VEE+SD+R VV LKNR+RVQNHIG +HA   AL AE+ATG VVGMN+PDS++P+ K+MK+++V+R  GD++A A LTEEQ+  I ++EKG++ VAV +TD+  K P+ AEMVWAW P  R
Sbjct:    3 QLNRIVSKI----NLLPRFARSRALTTFFGKTVKFVGTANATVEELSDQRCVVTLKNRKRVQNHIGSVHAVANALIAETATGFVVGMNIPDSSVPVIKTMKLDYVKRSTGDMRAEARLTEEQVEAIRTQEKGEITVAVSITDAENKEPVLAEMVWAWTPNRR 160          
BLAST of EWM21345.1 vs. NCBI_GenBank
Match: gi|940383426|ref|WP_054978199.1| (DUF4442 domain-containing protein [Pseudoalteromonas sp. P1-9] >gi|939939053|gb|KPV98026.1| hypothetical protein AN214_00412 [Pseudoalteromonas sp. P1-9])

HSP 1 Score: 176.407 bits (446), Expect = 1.608e-53
Identity = 89/165 (53.94%), Postives = 114/165 (69.09%), Query Frame = 0
Query:    3 CRKLNRLATQVAKLTSPLPAAYKPWGYTLAFDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPKLRK 167
              KL++L  ++ KL    P +   +  T  F   VK AGTA+L V  +S+ + VV L N++RVQNHIGGIHA G ALAAESA+GIV GMNVPDS LPL KSM + + +R +GDI A A L+ E +T INS+EKGD++V V ++D SG SPI  EM WAWVPK R+
Sbjct:    2 ANKLSKLVNKIYKL----PKSTHEFLLTKLFTSQVKFAGTAKLRVLSISNDKVVVKLANKKRVQNHIGGIHAVGAALAAESASGIVFGMNVPDSHLPLLKSMTLEYNKRMQGDITATAQLSSEVITAINSDEKGDLIVPVVLSDESGNSPIHCEMRWAWVPKKRR 162          
BLAST of EWM21345.1 vs. NCBI_GenBank
Match: gi|669139510|ref|XP_008605323.1| (hypothetical protein SDRG_01568 [Saprolegnia diclina VS20] >gi|530743367|gb|EQC41609.1| hypothetical protein SDRG_01568 [Saprolegnia diclina VS20])

HSP 1 Score: 174.481 bits (441), Expect = 7.635e-53
Identity = 87/160 (54.37%), Postives = 117/160 (73.12%), Query Frame = 0
Query:    6 LNRLATQVAKL-TSPLPAAYKPWGYTLAFDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPK 164
            +N+L   VAK+ +S  PA  +    + AF+  VK+AG A + VE ++++++VV LKN  RVQNHIGG+HACGMAL AESA+G+V GMNV DS LPL KSM +++V+R +GD+KAVA LT+ Q  +I   +KG+VLV V VTDS+G SP+  EM W WVPK
Sbjct:    5 VNKLGKLVAKINSSSAPAFLREGALSTAFNAQVKMAGVAGIHVETLTEQKSVVSLKNSFRVQNHIGGVHACGMALLAESASGMVFGMNVRDSHLPLLKSMSMSYVKRAKGDLKAVATLTDAQRDEIAKSDKGEVLVNVVVTDSAGDSPVECEMRWVWVPK 164          
The following BLAST results are available for this feature:
BLAST of EWM21345.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101530|gb|EWM21345.1|1.440e-122100.00hypothetical protein Naga_100075g19 [Nannochlorops... [more]
gi|397614298|gb|EJK62712.1|6.806e-6456.97hypothetical protein THAOC_16666 [Thalassiosira oc... [more]
gi|298709352|emb|CBJ31287.1|1.583e-5665.93conserved unknown protein [Ectocarpus siliculosus]... [more]
gi|1173928628|gb|OQR82173.1|1.269e-5453.75hypothetical protein THRCLA_11093 [Thraustotheca c... [more]
gi|698813326|ref|XP_009839692.1|1.490e-5451.83hypothetical protein H257_13746 [Aphanomyces astac... [more]
gi|1173926766|gb|OQR80918.1|2.030e-5455.00hypothetical protein ACHHYP_17064 [Achlya hypogyna... [more]
gi|1176038185|gb|OQX35543.1|4.005e-5451.88DUF4442 domain-containing protein [Oceanospirillal... [more]
gi|521074338|ref|WP_020405245.1|8.550e-5451.23DUF4442 domain-containing protein [Hahella ganghwe... [more]
gi|940383426|ref|WP_054978199.1|1.608e-5353.94DUF4442 domain-containing protein [Pseudoalteromon... [more]
gi|669139510|ref|XP_008605323.1|7.635e-5354.38hypothetical protein SDRG_01568 [Saprolegnia dicli... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9357rna9357Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications