EWM21372.1, cds9302 (CDS) Nannochloropsis gaditana

Overview
NameEWM21372.1
Unique Namecds9302
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:415942..416041 -
Alignment locationKK037252.1:415591..415745 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21372.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100630g2.4289.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:415942..416041 -
KK037252.1supercontigKK037252.1:415591..415745 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21372.1 vs. NCBI_GenBank
Match: gi|585101571|gb|EWM21372.1| (hypothetical protein Naga_100630g2 [Nannochloropsis gaditana])

HSP 1 Score: 177.178 bits (448), Expect = 1.837e-56
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 
Query:    1 MCKQNNNTIDPAGPKLIYEARYCALGLFEKEKSYRADDFHVFFSVLYCLPGGLTARRGTRAGRASFIVSEVFHFAVICDKQVLP 84
            MCKQNNNTIDPAGPKLIYEARYCALGLFEKEKSYRADDFHVFFSVLYCLPGGLTARRGTRAGRASFIVSEVFHFAVICDKQVLP
Sbjct:    1 MCKQNNNTIDPAGPKLIYEARYCALGLFEKEKSYRADDFHVFFSVLYCLPGGLTARRGTRAGRASFIVSEVFHFAVICDKQVLP 84
The following BLAST results are available for this feature:
BLAST of EWM21372.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101571|gb|EWM21372.1|1.837e-56100.00hypothetical protein Naga_100630g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9332rna9332Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications