EWM21391.1, cds9287 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21391.1 vs. NCBI_GenBank
Match: gi|585101608|gb|EWM21391.1| (transaldolase [Nannochloropsis gaditana]) HSP 1 Score: 481.871 bits (1239), Expect = 3.487e-172 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0 Query: 1 MAKLKRFLRKASFLLATSPSSSFSWPRAFFPSPSHGGPPPARTTRYFSPASKMYMKATSSSRTPSNLLAQVRCHSQVILDTADYLQLAHLPGTLEVTTNPSIVWQAAQKEEYFHLLEEACNMYLPLGIDGIPDMLEAVPPKFAREIWKRLPHAPSSSSLPLPRVYVQLDPRYAFDIDLAVRQSLALVDLCVHKHQLPLSNLVIKIPGSWEGIQAAKDLRALERVFFDYLRERPGV 235 MAKLKRFLRKASFLLATSPSSSFSWPRAFFPSPSHGGPPPARTTRYFSPASKMYMKATSSSRTPSNLLAQVRCHSQVILDTADYLQLAHLPGTLEVTTNPSIVWQAAQKEEYFHLLEEACNMYLPLGIDGIPDMLEAVPPKFAREIWKRLPHAPSSSSLPLPRVYVQLDPRYAFDIDLAVRQSLALVDLCVHKHQLPLSNLVIKIPGSWEGIQAAKDLRALERVFFDYLRERPGV Sbjct: 1 MAKLKRFLRKASFLLATSPSSSFSWPRAFFPSPSHGGPPPARTTRYFSPASKMYMKATSSSRTPSNLLAQVRCHSQVILDTADYLQLAHLPGTLEVTTNPSIVWQAAQKEEYFHLLEEACNMYLPLGIDGIPDMLEAVPPKFAREIWKRLPHAPSSSSLPLPRVYVQLDPRYAFDIDLAVRQSLALVDLCVHKHQLPLSNLVIKIPGSWEGIQAAKDLRALERVFFDYLRERPGV 235
BLAST of EWM21391.1 vs. NCBI_GenBank
Match: gi|114052613|ref|NP_001040544.1| (transaldolase [Bombyx mori] >gi|95103094|gb|ABF51488.1| transaldolase [Bombyx mori]) HSP 1 Score: 82.8037 bits (203), Expect = 4.707e-15 Identity = 52/162 (32.10%), Postives = 86/162 (53.09%), Query Frame = 0 Query: 60 SSRTPSNLLAQVRCHSQVILDTADYLQLAHLPGTLEVTTNPSIVWQAAQKEEYFHLLEEACNMYLPLGIDGIPDMLEAVPPKFAREIWKRLPHAPSSSSLPL--PRVYVQLDPRYAFDIDLAVRQSLALVDLCVHKHQLPLSNLVIKIPGSWEGIQAAKDLR 219 + RT + L Q++ HS V+ DT D+ + T + TTNPS++ AA E+Y H+L++A + G D + E V E W L L + RV V++D R +FD D ++ +++ ++L +H + ++IK+ +WEGIQAAK+L Sbjct: 7 TKRTKMSALDQLKQHSTVVADTGDFEAMKEYKPT-DATTNPSLILSAAGMEQYQHILDKA----IKYGKDNGSSIEEQVA-----ETWDMLSVLLGCEILKIIPGRVSVEVDARLSFDKDASIAKAIKFINLFA-EHGIKKERILIKLASTWEGIQAAKELE 157
BLAST of EWM21391.1 vs. NCBI_GenBank
Match: gi|1094086008|ref|WP_071077244.1| (transaldolase [Janthinobacterium lividum] >gi|1092398982|gb|OHV95789.1| transaldolase [Janthinobacterium lividum]) HSP 1 Score: 80.8777 bits (198), Expect = 2.544e-14 Identity = 52/153 (33.99%), Postives = 82/153 (53.59%), Query Frame = 0 Query: 66 NLLAQVRCHSQVILDTADYLQLAHLPGTLEVTTNPSIVWQAAQKEEYFHLLEEACNMYLPLGIDGIPDMLEAVPPKFAREIWKRLPHAPSSSSLPLPRVYVQLDPRYAFDIDLAVRQSLALVDLCVHKHQLPLSNLVIKIPGSWEGIQAAKDL 218 N L Q++ HS V+ DT D+LQLA + TTNPS++ +A + +Y LLE + +D D+++AV +F EI K +P RV ++D R +FD D V + L+ L + + ++IK+ +WEGIQAA++L Sbjct: 2 NQLQQLKQHSTVVADTGDFLQLARFAPQ-DATTNPSLILKAVLQPDYAPLLESTVAAHQSASLD---DIVDAVLVRFGLEILKVVP----------GRVSTEVDARLSFDRDATVARGRRLIAL-YEQAGIARERVLIKVAATWEGIQAAREL 139
BLAST of EWM21391.1 vs. NCBI_GenBank
Match: gi|1082796514|gb|OGB13095.1| (transaldolase [Burkholderiales bacterium RIFCSPLOWO2_02_FULL_67_64] >gi|1082823991|gb|OGB38655.1| transaldolase [Burkholderiales bacterium RIFCSPLOWO2_12_67_14] >gi|1082825824|gb|OGB40328.1| transaldolase [Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_67_38] >gi|1082872937|gb|OGB83792.1| transaldolase [Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210]) HSP 1 Score: 80.4925 bits (197), Expect = 3.042e-14 Identity = 50/154 (32.47%), Postives = 81/154 (52.60%), Query Frame = 0 Query: 66 NLLAQVRCHSQVILDTADYLQLAHLPGTLEVTTNPSIVWQAAQKEEYFHLLEEACNMYLPLGIDGIPDMLEAVPPKFAREIWKRLPHAPSSSSLPLPRVYVQLDPRYAFDIDLAVRQSLALVDLCVHKHQLPLSNLVIKIPGSWEGIQAAKDLR 219 N L ++ + V+ DT D+ Q+A + TTNPS++ +A QK EY HLL++A + Y G G+ + + + F EI K +P RV ++D R +FD + V ++ ++DL + + ++IKI +WEGIQAA L Sbjct: 2 NQLDALKQLTTVVADTGDFNQIAAFS-PRDATTNPSLILKAVQKPEYAHLLQDAVSKY---GSQGLDETMNRLLVSFGCEILKHIP----------GRVSTEVDARLSFDTEATVTRARRIIDL-YQGEGVHIDRVLIKIASTWEGIQAAARLE 140
BLAST of EWM21391.1 vs. NCBI_GenBank
Match: gi|971167744|gb|ALV05487.1| (transaldolase [Roseateles depolymerans]) HSP 1 Score: 80.4925 bits (197), Expect = 3.322e-14 Identity = 52/162 (32.10%), Postives = 83/162 (51.23%), Query Frame = 0 Query: 58 TSSSRTPSNLLAQVRCHSQVILDTADYLQLAHLPGTLEVTTNPSIVWQAAQKEEYFHLLEEACNMYLPLGIDGIPDMLEAVPPKFAREIWKRLPHAPSSSSLPLPRVYVQLDPRYAFDIDLAVRQSLALVDLCVHKHQLPLSNLVIKIPGSWEGIQAAKDLR 219 T+S R P N L Q++ + V+ DT ++ QLA + TTNPS++ +A Q +Y HLLE N D + +++ V F EI K +P RV ++D R +FD + ++ ++ L +P ++IKI +WEGIQAA++L Sbjct: 14 TASGRPPMNQLEQLKAFTTVVADTGNFKQLAQFTPQ-DATTNPSLILKAVQSPDYVHLLE---NTVAAFKTDALDLIVDQVLVAFGLEILKVVPG----------RVSTEVDARLSFDTVGTLARARRIMAL-YEAAGIPRDRVLIKIAATWEGIQAARELE 160
BLAST of EWM21391.1 vs. NCBI_GenBank
Match: gi|1134821491|gb|OMJ26002.1| (Transaldolase [Smittium culicis]) HSP 1 Score: 80.1073 bits (196), Expect = 3.864e-14 Identity = 52/159 (32.70%), Postives = 81/159 (50.94%), Query Frame = 0 Query: 65 SNLLAQVRCHSQVILDTADYLQLAHLPGTLEVTTNPSIVWQAAQKEEYFHLLEEACNMYLPLGIDGIPDMLEAVPPK----FAREIWKRLPHAPSSSSLPLPRVYVQLDPRYAFDIDLAVRQSLALVDLCVHKHQLPLSNLVIKIPGSWEGIQAAKDLR 219 S++L Q++ + V+ DT D+ +A T + TTNPS++ A+ K +Y HLL+EA Y GI +EA K F EI K +P RV ++D R +FD + ++L L+ L + ++IK+ +WEGIQAA +L Sbjct: 2 SSILDQLKTQTVVVADTGDFEAIAQYKPT-DATTNPSLILAASAKPDYAHLLDEAV-QYAKNNASGIDQQVEAATNKLITNFGVEILKHVP----------GRVSTEVDARLSFDKQATINKALELIKL-YEAQNISKDRILIKMASTWEGIQAAHELE 147
BLAST of EWM21391.1 vs. NCBI_GenBank
Match: gi|1059968317|ref|WP_069049022.1| (transaldolase [Hydrogenophaga sp. RAC07] >gi|1059491453|gb|AOF84569.1| transaldolase [Hydrogenophaga sp. RAC07]) HSP 1 Score: 79.337 bits (194), Expect = 8.581e-14 Identity = 50/153 (32.68%), Postives = 81/153 (52.94%), Query Frame = 0 Query: 66 NLLAQVRCHSQVILDTADYLQLAHLPGTLEVTTNPSIVWQAAQKEEYFHLLEEACNMYLPLGIDGIPDMLEAVPPKFAREIWKRLPHAPSSSSLPLPRVYVQLDPRYAFDIDLAVRQSLALVDLCVHKHQLPLSNLVIKIPGSWEGIQAAKDL 218 N L ++ + V+ DT D+ Q+A + TTNPS++ +A QK EY HLL++A Y G+D + + L +F EI + +P RV ++D R +FD + V ++ ++DL + + ++IKI +WEGIQAA L Sbjct: 2 NQLDALKQFTTVVADTGDFKQIAAFAPQ-DATTNPSLILKAVQKPEYAHLLKDAVATYGAQGLDEVTNRL---LVRFGCEILELIP----------GRVSTEVDARLSFDTEATVTRARRIIDL-YQGEGVHVDRVLIKIASTWEGIQAAARL 139
BLAST of EWM21391.1 vs. NCBI_GenBank
Match: gi|1056957204|ref|WP_068370241.1| (transaldolase [Kerstersia gyiorum] >gi|817528349|gb|KKO71941.1| transaldolase [Kerstersia gyiorum]) HSP 1 Score: 78.5666 bits (192), Expect = 1.463e-13 Identity = 53/155 (34.19%), Postives = 80/155 (51.61%), Query Frame = 0 Query: 66 NLLAQVRCHSQVILDTADYLQLAHLPGTLEVTTNPSIVWQAAQKEEYFHLLEEACNMYLPLGIDGIPDMLEAVPPKFAREIWKRLPHAPSSSSLPLPRVYVQLDPRYAFDIDLAVRQSLALVDLCVHKHQLPLSNLVIKIPGSWEGIQAAKDLRA 220 +LL +R H+ V+ DT D+ L L T + TTNPS++ +AAQKEEY LLE P++L+ + F REI +P RV ++D R +FD + ++ + +P S ++IKI +WEGIQAA+ L+A Sbjct: 3 SLLESLRRHTTVVADTGDFAALRTLQPT-DATTNPSLILKAAQKEEYRPLLERVVAQRPDA---STPELLDDLLVAFGREILALIPG----------RVSTEVDARLSFDTQATAERGRGIIAR-YEEAGIPRSRVLIKIASTWEGIQAARILQA 142
BLAST of EWM21391.1 vs. NCBI_GenBank
Match: gi|1134809665|gb|OMJ17892.1| (Transaldolase [Smittium culicis]) HSP 1 Score: 78.5666 bits (192), Expect = 1.537e-13 Identity = 51/159 (32.08%), Postives = 80/159 (50.31%), Query Frame = 0 Query: 65 SNLLAQVRCHSQVILDTADYLQLAHLPGTLEVTTNPSIVWQAAQKEEYFHLLEEACNMYLPLGIDGIPDMLEAVPPK----FAREIWKRLPHAPSSSSLPLPRVYVQLDPRYAFDIDLAVRQSLALVDLCVHKHQLPLSNLVIKIPGSWEGIQAAKDLR 219 S++L Q++ + V+ DT D+ +A T + TTNPS++ A+ K +Y HLL+EA Y GI +E K F EI K +P RV ++D R +FD + ++L L+ L + ++IK+ +WEGIQAA +L Sbjct: 2 SSILDQLKTQTVVVADTGDFEAIAQYKPT-DATTNPSLILAASAKPDYAHLLDEAV-QYAKNNASGIDQQVEVATNKLITNFGVEILKHVP----------GRVSTEVDARLSFDKQATINKALELIKL-YEAQNISKDRILIKMASTWEGIQAAHELE 147
BLAST of EWM21391.1 vs. NCBI_GenBank
Match: gi|1087212323|emb|SDG70656.1| (transaldolase [Janthinobacterium sp. YR213]) HSP 1 Score: 78.5666 bits (192), Expect = 1.542e-13 Identity = 51/153 (33.33%), Postives = 81/153 (52.94%), Query Frame = 0 Query: 66 NLLAQVRCHSQVILDTADYLQLAHLPGTLEVTTNPSIVWQAAQKEEYFHLLEEACNMYLPLGIDGIPDMLEAVPPKFAREIWKRLPHAPSSSSLPLPRVYVQLDPRYAFDIDLAVRQSLALVDLCVHKHQLPLSNLVIKIPGSWEGIQAAKDL 218 N L Q++ HS V+ DT D+LQLA + TTNPS++ +A + +Y LLE + +D D+++ V +F EI K +P RV ++D R +FD D V + L+ L + + ++IK+ +WEGIQAA++L Sbjct: 2 NQLQQLKQHSTVVADTGDFLQLARFAPQ-DATTNPSLILKAVLQPDYAPLLESTVAAHQSAALD---DIVDQVLVRFGLEILKVVP----------GRVSTEVDARLSFDRDATVARGRRLIAL-YEQAGISRERVLIKVAATWEGIQAAREL 139 The following BLAST results are available for this feature:
BLAST of EWM21391.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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