EWM21391.1, cds9287 (CDS) Nannochloropsis gaditana

Overview
NameEWM21391.1
Unique Namecds9287
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:370439..370801 -
Alignment locationKK037252.1:369926..370210 -
Alignment locationKK037252.1:368968..369027 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21391.1
Producttransaldolase
Orig transcript idgnl|cribi|Naga_100215g12.1633.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:370439..370801 -
KK037252.1supercontigKK037252.1:369926..370210 -
KK037252.1supercontigKK037252.1:368968..369027 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006091generation of precursor metabolites and energy
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR018225Transaldolase_AS
IPR001585Transaldolase
IPR013785Aldolase_TIM
Homology
BLAST of EWM21391.1 vs. NCBI_GenBank
Match: gi|585101608|gb|EWM21391.1| (transaldolase [Nannochloropsis gaditana])

HSP 1 Score: 481.871 bits (1239), Expect = 3.487e-172
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
Query:    1 MAKLKRFLRKASFLLATSPSSSFSWPRAFFPSPSHGGPPPARTTRYFSPASKMYMKATSSSRTPSNLLAQVRCHSQVILDTADYLQLAHLPGTLEVTTNPSIVWQAAQKEEYFHLLEEACNMYLPLGIDGIPDMLEAVPPKFAREIWKRLPHAPSSSSLPLPRVYVQLDPRYAFDIDLAVRQSLALVDLCVHKHQLPLSNLVIKIPGSWEGIQAAKDLRALERVFFDYLRERPGV 235
            MAKLKRFLRKASFLLATSPSSSFSWPRAFFPSPSHGGPPPARTTRYFSPASKMYMKATSSSRTPSNLLAQVRCHSQVILDTADYLQLAHLPGTLEVTTNPSIVWQAAQKEEYFHLLEEACNMYLPLGIDGIPDMLEAVPPKFAREIWKRLPHAPSSSSLPLPRVYVQLDPRYAFDIDLAVRQSLALVDLCVHKHQLPLSNLVIKIPGSWEGIQAAKDLRALERVFFDYLRERPGV
Sbjct:    1 MAKLKRFLRKASFLLATSPSSSFSWPRAFFPSPSHGGPPPARTTRYFSPASKMYMKATSSSRTPSNLLAQVRCHSQVILDTADYLQLAHLPGTLEVTTNPSIVWQAAQKEEYFHLLEEACNMYLPLGIDGIPDMLEAVPPKFAREIWKRLPHAPSSSSLPLPRVYVQLDPRYAFDIDLAVRQSLALVDLCVHKHQLPLSNLVIKIPGSWEGIQAAKDLRALERVFFDYLRERPGV 235          
BLAST of EWM21391.1 vs. NCBI_GenBank
Match: gi|114052613|ref|NP_001040544.1| (transaldolase [Bombyx mori] >gi|95103094|gb|ABF51488.1| transaldolase [Bombyx mori])

HSP 1 Score: 82.8037 bits (203), Expect = 4.707e-15
Identity = 52/162 (32.10%), Postives = 86/162 (53.09%), Query Frame = 0
Query:   60 SSRTPSNLLAQVRCHSQVILDTADYLQLAHLPGTLEVTTNPSIVWQAAQKEEYFHLLEEACNMYLPLGIDGIPDMLEAVPPKFAREIWKRLPHAPSSSSLPL--PRVYVQLDPRYAFDIDLAVRQSLALVDLCVHKHQLPLSNLVIKIPGSWEGIQAAKDLR 219
            + RT  + L Q++ HS V+ DT D+  +     T + TTNPS++  AA  E+Y H+L++A    +  G D    + E V      E W  L        L +   RV V++D R +FD D ++ +++  ++L   +H +    ++IK+  +WEGIQAAK+L 
Sbjct:    7 TKRTKMSALDQLKQHSTVVADTGDFEAMKEYKPT-DATTNPSLILSAAGMEQYQHILDKA----IKYGKDNGSSIEEQVA-----ETWDMLSVLLGCEILKIIPGRVSVEVDARLSFDKDASIAKAIKFINLFA-EHGIKKERILIKLASTWEGIQAAKELE 157          
BLAST of EWM21391.1 vs. NCBI_GenBank
Match: gi|1094086008|ref|WP_071077244.1| (transaldolase [Janthinobacterium lividum] >gi|1092398982|gb|OHV95789.1| transaldolase [Janthinobacterium lividum])

HSP 1 Score: 80.8777 bits (198), Expect = 2.544e-14
Identity = 52/153 (33.99%), Postives = 82/153 (53.59%), Query Frame = 0
Query:   66 NLLAQVRCHSQVILDTADYLQLAHLPGTLEVTTNPSIVWQAAQKEEYFHLLEEACNMYLPLGIDGIPDMLEAVPPKFAREIWKRLPHAPSSSSLPLPRVYVQLDPRYAFDIDLAVRQSLALVDLCVHKHQLPLSNLVIKIPGSWEGIQAAKDL 218
            N L Q++ HS V+ DT D+LQLA      + TTNPS++ +A  + +Y  LLE     +    +D   D+++AV  +F  EI K +P           RV  ++D R +FD D  V +   L+ L   +  +    ++IK+  +WEGIQAA++L
Sbjct:    2 NQLQQLKQHSTVVADTGDFLQLARFAPQ-DATTNPSLILKAVLQPDYAPLLESTVAAHQSASLD---DIVDAVLVRFGLEILKVVP----------GRVSTEVDARLSFDRDATVARGRRLIAL-YEQAGIARERVLIKVAATWEGIQAAREL 139          
BLAST of EWM21391.1 vs. NCBI_GenBank
Match: gi|1082796514|gb|OGB13095.1| (transaldolase [Burkholderiales bacterium RIFCSPLOWO2_02_FULL_67_64] >gi|1082823991|gb|OGB38655.1| transaldolase [Burkholderiales bacterium RIFCSPLOWO2_12_67_14] >gi|1082825824|gb|OGB40328.1| transaldolase [Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_67_38] >gi|1082872937|gb|OGB83792.1| transaldolase [Burkholderiales bacterium RIFCSPLOWO2_12_FULL_67_210])

HSP 1 Score: 80.4925 bits (197), Expect = 3.042e-14
Identity = 50/154 (32.47%), Postives = 81/154 (52.60%), Query Frame = 0
Query:   66 NLLAQVRCHSQVILDTADYLQLAHLPGTLEVTTNPSIVWQAAQKEEYFHLLEEACNMYLPLGIDGIPDMLEAVPPKFAREIWKRLPHAPSSSSLPLPRVYVQLDPRYAFDIDLAVRQSLALVDLCVHKHQLPLSNLVIKIPGSWEGIQAAKDLR 219
            N L  ++  + V+ DT D+ Q+A      + TTNPS++ +A QK EY HLL++A + Y   G  G+ + +  +   F  EI K +P           RV  ++D R +FD +  V ++  ++DL      + +  ++IKI  +WEGIQAA  L 
Sbjct:    2 NQLDALKQLTTVVADTGDFNQIAAFS-PRDATTNPSLILKAVQKPEYAHLLQDAVSKY---GSQGLDETMNRLLVSFGCEILKHIP----------GRVSTEVDARLSFDTEATVTRARRIIDL-YQGEGVHIDRVLIKIASTWEGIQAAARLE 140          
BLAST of EWM21391.1 vs. NCBI_GenBank
Match: gi|971167744|gb|ALV05487.1| (transaldolase [Roseateles depolymerans])

HSP 1 Score: 80.4925 bits (197), Expect = 3.322e-14
Identity = 52/162 (32.10%), Postives = 83/162 (51.23%), Query Frame = 0
Query:   58 TSSSRTPSNLLAQVRCHSQVILDTADYLQLAHLPGTLEVTTNPSIVWQAAQKEEYFHLLEEACNMYLPLGIDGIPDMLEAVPPKFAREIWKRLPHAPSSSSLPLPRVYVQLDPRYAFDIDLAVRQSLALVDLCVHKHQLPLSNLVIKIPGSWEGIQAAKDLR 219
            T+S R P N L Q++  + V+ DT ++ QLA      + TTNPS++ +A Q  +Y HLLE   N       D +  +++ V   F  EI K +P           RV  ++D R +FD    + ++  ++ L      +P   ++IKI  +WEGIQAA++L 
Sbjct:   14 TASGRPPMNQLEQLKAFTTVVADTGNFKQLAQFTPQ-DATTNPSLILKAVQSPDYVHLLE---NTVAAFKTDALDLIVDQVLVAFGLEILKVVPG----------RVSTEVDARLSFDTVGTLARARRIMAL-YEAAGIPRDRVLIKIAATWEGIQAARELE 160          
BLAST of EWM21391.1 vs. NCBI_GenBank
Match: gi|1134821491|gb|OMJ26002.1| (Transaldolase [Smittium culicis])

HSP 1 Score: 80.1073 bits (196), Expect = 3.864e-14
Identity = 52/159 (32.70%), Postives = 81/159 (50.94%), Query Frame = 0
Query:   65 SNLLAQVRCHSQVILDTADYLQLAHLPGTLEVTTNPSIVWQAAQKEEYFHLLEEACNMYLPLGIDGIPDMLEAVPPK----FAREIWKRLPHAPSSSSLPLPRVYVQLDPRYAFDIDLAVRQSLALVDLCVHKHQLPLSNLVIKIPGSWEGIQAAKDLR 219
            S++L Q++  + V+ DT D+  +A    T + TTNPS++  A+ K +Y HLL+EA   Y      GI   +EA   K    F  EI K +P           RV  ++D R +FD    + ++L L+ L      +    ++IK+  +WEGIQAA +L 
Sbjct:    2 SSILDQLKTQTVVVADTGDFEAIAQYKPT-DATTNPSLILAASAKPDYAHLLDEAV-QYAKNNASGIDQQVEAATNKLITNFGVEILKHVP----------GRVSTEVDARLSFDKQATINKALELIKL-YEAQNISKDRILIKMASTWEGIQAAHELE 147          
BLAST of EWM21391.1 vs. NCBI_GenBank
Match: gi|1059968317|ref|WP_069049022.1| (transaldolase [Hydrogenophaga sp. RAC07] >gi|1059491453|gb|AOF84569.1| transaldolase [Hydrogenophaga sp. RAC07])

HSP 1 Score: 79.337 bits (194), Expect = 8.581e-14
Identity = 50/153 (32.68%), Postives = 81/153 (52.94%), Query Frame = 0
Query:   66 NLLAQVRCHSQVILDTADYLQLAHLPGTLEVTTNPSIVWQAAQKEEYFHLLEEACNMYLPLGIDGIPDMLEAVPPKFAREIWKRLPHAPSSSSLPLPRVYVQLDPRYAFDIDLAVRQSLALVDLCVHKHQLPLSNLVIKIPGSWEGIQAAKDL 218
            N L  ++  + V+ DT D+ Q+A      + TTNPS++ +A QK EY HLL++A   Y   G+D + + L     +F  EI + +P           RV  ++D R +FD +  V ++  ++DL      + +  ++IKI  +WEGIQAA  L
Sbjct:    2 NQLDALKQFTTVVADTGDFKQIAAFAPQ-DATTNPSLILKAVQKPEYAHLLKDAVATYGAQGLDEVTNRL---LVRFGCEILELIP----------GRVSTEVDARLSFDTEATVTRARRIIDL-YQGEGVHVDRVLIKIASTWEGIQAAARL 139          
BLAST of EWM21391.1 vs. NCBI_GenBank
Match: gi|1056957204|ref|WP_068370241.1| (transaldolase [Kerstersia gyiorum] >gi|817528349|gb|KKO71941.1| transaldolase [Kerstersia gyiorum])

HSP 1 Score: 78.5666 bits (192), Expect = 1.463e-13
Identity = 53/155 (34.19%), Postives = 80/155 (51.61%), Query Frame = 0
Query:   66 NLLAQVRCHSQVILDTADYLQLAHLPGTLEVTTNPSIVWQAAQKEEYFHLLEEACNMYLPLGIDGIPDMLEAVPPKFAREIWKRLPHAPSSSSLPLPRVYVQLDPRYAFDIDLAVRQSLALVDLCVHKHQLPLSNLVIKIPGSWEGIQAAKDLRA 220
            +LL  +R H+ V+ DT D+  L  L  T + TTNPS++ +AAQKEEY  LLE              P++L+ +   F REI   +P           RV  ++D R +FD      +   ++     +  +P S ++IKI  +WEGIQAA+ L+A
Sbjct:    3 SLLESLRRHTTVVADTGDFAALRTLQPT-DATTNPSLILKAAQKEEYRPLLERVVAQRPDA---STPELLDDLLVAFGREILALIPG----------RVSTEVDARLSFDTQATAERGRGIIAR-YEEAGIPRSRVLIKIASTWEGIQAARILQA 142          
BLAST of EWM21391.1 vs. NCBI_GenBank
Match: gi|1134809665|gb|OMJ17892.1| (Transaldolase [Smittium culicis])

HSP 1 Score: 78.5666 bits (192), Expect = 1.537e-13
Identity = 51/159 (32.08%), Postives = 80/159 (50.31%), Query Frame = 0
Query:   65 SNLLAQVRCHSQVILDTADYLQLAHLPGTLEVTTNPSIVWQAAQKEEYFHLLEEACNMYLPLGIDGIPDMLEAVPPK----FAREIWKRLPHAPSSSSLPLPRVYVQLDPRYAFDIDLAVRQSLALVDLCVHKHQLPLSNLVIKIPGSWEGIQAAKDLR 219
            S++L Q++  + V+ DT D+  +A    T + TTNPS++  A+ K +Y HLL+EA   Y      GI   +E    K    F  EI K +P           RV  ++D R +FD    + ++L L+ L      +    ++IK+  +WEGIQAA +L 
Sbjct:    2 SSILDQLKTQTVVVADTGDFEAIAQYKPT-DATTNPSLILAASAKPDYAHLLDEAV-QYAKNNASGIDQQVEVATNKLITNFGVEILKHVP----------GRVSTEVDARLSFDKQATINKALELIKL-YEAQNISKDRILIKMASTWEGIQAAHELE 147          
BLAST of EWM21391.1 vs. NCBI_GenBank
Match: gi|1087212323|emb|SDG70656.1| (transaldolase [Janthinobacterium sp. YR213])

HSP 1 Score: 78.5666 bits (192), Expect = 1.542e-13
Identity = 51/153 (33.33%), Postives = 81/153 (52.94%), Query Frame = 0
Query:   66 NLLAQVRCHSQVILDTADYLQLAHLPGTLEVTTNPSIVWQAAQKEEYFHLLEEACNMYLPLGIDGIPDMLEAVPPKFAREIWKRLPHAPSSSSLPLPRVYVQLDPRYAFDIDLAVRQSLALVDLCVHKHQLPLSNLVIKIPGSWEGIQAAKDL 218
            N L Q++ HS V+ DT D+LQLA      + TTNPS++ +A  + +Y  LLE     +    +D   D+++ V  +F  EI K +P           RV  ++D R +FD D  V +   L+ L   +  +    ++IK+  +WEGIQAA++L
Sbjct:    2 NQLQQLKQHSTVVADTGDFLQLARFAPQ-DATTNPSLILKAVLQPDYAPLLESTVAAHQSAALD---DIVDQVLVRFGLEILKVVP----------GRVSTEVDARLSFDRDATVARGRRLIAL-YEQAGISRERVLIKVAATWEGIQAAREL 139          
The following BLAST results are available for this feature:
BLAST of EWM21391.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101608|gb|EWM21391.1|3.487e-172100.00transaldolase [Nannochloropsis gaditana][more]
gi|114052613|ref|NP_001040544.1|4.707e-1532.10transaldolase [Bombyx mori] >gi|95103094|gb|ABF514... [more]
gi|1094086008|ref|WP_071077244.1|2.544e-1433.99transaldolase [Janthinobacterium lividum] >gi|1092... [more]
gi|1082796514|gb|OGB13095.1|3.042e-1432.47transaldolase [Burkholderiales bacterium RIFCSPLOW... [more]
gi|971167744|gb|ALV05487.1|3.322e-1432.10transaldolase [Roseateles depolymerans][more]
gi|1134821491|gb|OMJ26002.1|3.864e-1432.70Transaldolase [Smittium culicis][more]
gi|1059968317|ref|WP_069049022.1|8.581e-1432.68transaldolase [Hydrogenophaga sp. RAC07] >gi|10594... [more]
gi|1056957204|ref|WP_068370241.1|1.463e-1334.19transaldolase [Kerstersia gyiorum] >gi|817528349|g... [more]
gi|1134809665|gb|OMJ17892.1|1.537e-1332.08Transaldolase [Smittium culicis][more]
gi|1087212323|emb|SDG70656.1|1.542e-1333.33transaldolase [Janthinobacterium sp. YR213][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9317rna9317Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications