EWM21386.1, cds9286 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21386.1 vs. NCBI_GenBank
Match: gi|585101603|gb|EWM21386.1| (hypothetical protein Naga_100215g11 [Nannochloropsis gaditana]) HSP 1 Score: 907.131 bits (2343), Expect = 0.000e+0 Identity = 462/462 (100.00%), Postives = 462/462 (100.00%), Query Frame = 0 Query: 1 MAPLPSSLRQPPPSARSDSASTLTPRGQAPNTNGPTILNPSTSHLSRASPLKPWEQSARRVMTANTAGHAGGNERPQGNGLSHTPREAVNYRTTNPNPARNVGSISHTTGSSSTRSLAGGVKGQGNGEEDFQDRSSAQLSELGHPQDAPTQAASSAPYTNHAANGGPYAPPTSRYGQLGTSSNGGMYGYPGTTYGGAGAYGRYNSGSMYGSSSLYGSGYGAGSMYGTPSMYGGMGGMYGGGYGYGGRGGMYGSMHGGGMGGEGSIGWLQNVFHLVSSLGQMTELLGMNTEALGYLFGTLMGFAETAGNVLGQLTARPARLLEAGQEGVTEEEAAVRAKQEKIVRVVRWAVGLALSYLAWRVLRKVGRWVKAGDTRRDVALAAAAGAMVGAGGRGGRGQLQPYLPPSPPPQAWSARRPMPGEGGERRWGGGGRGEEHVEGLPNAALEQAFHSSSGGGVRPGEI 462 MAPLPSSLRQPPPSARSDSASTLTPRGQAPNTNGPTILNPSTSHLSRASPLKPWEQSARRVMTANTAGHAGGNERPQGNGLSHTPREAVNYRTTNPNPARNVGSISHTTGSSSTRSLAGGVKGQGNGEEDFQDRSSAQLSELGHPQDAPTQAASSAPYTNHAANGGPYAPPTSRYGQLGTSSNGGMYGYPGTTYGGAGAYGRYNSGSMYGSSSLYGSGYGAGSMYGTPSMYGGMGGMYGGGYGYGGRGGMYGSMHGGGMGGEGSIGWLQNVFHLVSSLGQMTELLGMNTEALGYLFGTLMGFAETAGNVLGQLTARPARLLEAGQEGVTEEEAAVRAKQEKIVRVVRWAVGLALSYLAWRVLRKVGRWVKAGDTRRDVALAAAAGAMVGAGGRGGRGQLQPYLPPSPPPQAWSARRPMPGEGGERRWGGGGRGEEHVEGLPNAALEQAFHSSSGGGVRPGEI Sbjct: 1 MAPLPSSLRQPPPSARSDSASTLTPRGQAPNTNGPTILNPSTSHLSRASPLKPWEQSARRVMTANTAGHAGGNERPQGNGLSHTPREAVNYRTTNPNPARNVGSISHTTGSSSTRSLAGGVKGQGNGEEDFQDRSSAQLSELGHPQDAPTQAASSAPYTNHAANGGPYAPPTSRYGQLGTSSNGGMYGYPGTTYGGAGAYGRYNSGSMYGSSSLYGSGYGAGSMYGTPSMYGGMGGMYGGGYGYGGRGGMYGSMHGGGMGGEGSIGWLQNVFHLVSSLGQMTELLGMNTEALGYLFGTLMGFAETAGNVLGQLTARPARLLEAGQEGVTEEEAAVRAKQEKIVRVVRWAVGLALSYLAWRVLRKVGRWVKAGDTRRDVALAAAAGAMVGAGGRGGRGQLQPYLPPSPPPQAWSARRPMPGEGGERRWGGGGRGEEHVEGLPNAALEQAFHSSSGGGVRPGEI 462
BLAST of EWM21386.1 vs. NCBI_GenBank
Match: gi|635364329|emb|CCI47219.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 67.3958 bits (163), Expect = 3.567e-8 Identity = 80/262 (30.53%), Postives = 111/262 (42.37%), Query Frame = 0 Query: 122 KGQGNGEEDFQDRSSAQLSELGHPQDAPTQAASSAP----YTNHAANGGPYAPPTSRYGQLGTSSNGGMYGYPGT-----TYGGAGAYGRYNSGSMYGSSSLYGSGY---GAGSMYGTPSMYGGMGGMYGGGYGYGGRGGMYGSMHGGGMGGEGSIGWLQNVFHLVSSLGQMTELLGMNTEALGYLFGTLMGFAETAGN----VLGQLTARPARLLEAGQEGVTEEEAAVRAKQEKIVRVVRWAVGLALSY--LAWRVLRKV 365 + Q + E + ++ S+ LS L +A + ++ P ++ + A + Y ++N G YGY G TYGG YGSGY GAG+ G S Y G M+ G GYG G G G WL H VS++GQ+TELLGMN EAL + G+ + F E G +L L R L+ Q EE R ++ K VR V LAL Y WR ++K+ Sbjct: 28 RAQNDHENNARNVSTTSLSYLNSSTNASERLNTTNPPPPIFSQYGATFPSTITQPNIYESSTCNANVGPYGYSGMGSYNPTYGG------------------YGSGYSTYGAGNP-GFHSAYPRYGSMFSGNGGYGASFGRSGPEPGFPFK------WLTTFNHTVSAIGQVTELLGMNAEALQFCIGSFVHFIERIGFMSSGMLKLLAPRTDLPLDHPQYA---EEEGKRLRRVKTVRTVIGITILALVYKFYRWRSVKKL 261
BLAST of EWM21386.1 vs. NCBI_GenBank
Match: gi|325189976|emb|CCA24459.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 65.0846 bits (157), Expect = 5.149e-8 Identity = 87/280 (31.07%), Postives = 126/280 (45.00%), Query Frame = 0 Query: 122 KGQGNGEEDFQDRSSAQLSELGHPQDAPTQAASSAPYTNHAANGGPYA-PPTSRYG-QLGTSSNGGMYGYPGTTYGGAGAYGRYNSGSMYGSSSLYGSGYGA--GSMYGTPSMYGGMGGMYGGGYGYGGRGGMYGSMHGGGMGGE-------GSIGWLQNVFHLVSSLGQMTELLGMNTEALGYLFGTLMGFAETAG----NVLGQLTARPARLLEAGQEGVTEEEAAVRAKQEKIVRVVRWAVGLALSYLAWRVLR-KVGRWVKAGDTRRDVALAAAAG 385 + Q + + ++ SA +S + ++S +H+ P A P S YG ++N G YGY G G YNS YG+ YGSG+ A + G S Y G M+ G GG G MY G G G GWL H VS++GQ+TELLGMN EAL + G+ + F E G +L L R L+ Q EE K+ + VR VR +G+ L L +++ R + G+ +K TR ++++A G Sbjct: 17 RAQNDRDASARNAPSASISLPNQSTSTSERLSNSTATLSHSGAAIPTAFPQPSVYGPNAFDTTNLGPYGYSGM--------GSYNS--TYGA---YGSGFSAPASNNPGYNSAYPRYGSMFSGN---GGYGSMYSGAGGYGAGLGRPGPEPGFPFGWLSTFNHTVSAIGQVTELLGMNAEALQFCIGSFVHFIERIGLMSSGMLKLLAPRTDVPLDHPQYAEEEE------KRLRRVRTVRTVIGITLLALIYKLCRWRSGKQLKV--TRPEISVADLDG 272
BLAST of EWM21386.1 vs. NCBI_GenBank
Match: gi|1173928050|gb|OQR81765.1| (hypothetical protein THRCLA_11426 [Thraustotheca clavata]) HSP 1 Score: 63.929 bits (154), Expect = 8.834e-8 Identity = 39/114 (34.21%), Postives = 62/114 (54.39%), Query Frame = 0 Query: 259 MGGEGSIGWLQNVFHLVSSLGQMTELLGMNTEALGYLFGTLMGFAE----TAGNVLGQLTARPAR---LLEAGQEGVTEEEAAVRAKQEKIVRVVRWAVGLALSYLAWRVLRKV 365 M GS+GWL + V ++GQ+T+LLGMN EAL + FG + F E A + + L+ +P G+ TEEEA R ++ VRVV++ V + Y+ + ++K+ Sbjct: 140 MDPNGSLGWLASFNQTVGAIGQITQLLGMNAEALNFCFGNFVHFMERMAFMATSAVAMLSPKPVFPPGHPRYGEPPETEEEAKSRLRR---VRVVKFLVSVLTIYILHKSIQKL 250
BLAST of EWM21386.1 vs. NCBI_GenBank
Match: gi|970640790|gb|KUF83193.1| (Anoctamin-6 [Phytophthora nicotianae]) HSP 1 Score: 65.855 bits (159), Expect = 1.176e-7 Identity = 49/136 (36.03%), Postives = 67/136 (49.26%), Query Frame = 0 Query: 263 GSIGWLQNVFHLVSSLGQMTELLGMNTEALGYLFGTLMGFAETAGNVLGQLTAR-------PARLLEAGQEGVTEEEAAVRAKQEKIVRVVRWAVGLALSYLAWRVLRKVGRWVKAGDTRRDVALAAAAGAMVGAG 391 G +GWL + +VSS+GQ+TELLGMN EAL + G+ + F E G + + A P G+ VTEEE R ++ VR+ ++ V +A A VL K RWV +R L A VG G Sbjct: 171 GGLGWLNSFNQIVSSIGQITELLGMNAEALNFCIGSFVHFLERIGAMCAGIAAMLAPRPTFPPGHPRHGEPPVTEEEEKSRLRR---VRIFQFMVSMA----ALTVLYKGLRWVMRLRSRTTQKLLVAP-PTVGMG 298
BLAST of EWM21386.1 vs. NCBI_GenBank
Match: gi|675181715|ref|XP_008899742.1| (hypothetical protein PPTG_07326 [Phytophthora parasitica INRA-310] >gi|566031802|gb|ETI54713.1| hypothetical protein F443_02515 [Phytophthora parasitica P1569] >gi|567969491|gb|ETK94578.1| hypothetical protein L915_02390 [Phytophthora parasitica] >gi|568027096|gb|ETM01063.1| hypothetical protein L917_02287 [Phytophthora parasitica] >gi|568057579|gb|ETM54240.1| hypothetical protein L914_02388 [Phytophthora parasitica] >gi|568100442|gb|ETN15141.1| hypothetical protein PPTG_07326 [Phytophthora parasitica INRA-310] >gi|570335526|gb|ETO83474.1| hypothetical protein F444_02505 [Phytophthora parasitica P1976] >gi|570959584|gb|ETP24563.1| hypothetical protein F441_02455 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 63.5438 bits (153), Expect = 1.614e-7 Identity = 47/128 (36.72%), Postives = 64/128 (50.00%), Query Frame = 0 Query: 263 GSIGWLQNVFHLVSSLGQMTELLGMNTEALGYLFGTLMGFAETAGN----VLGQLTARPAR---LLEAGQEGVTEEEAAVRAKQEKIVRVVRWAVGLALSYLAWRVLRKVGRWVKAGDTRRDVALAAA 383 G +GWL + +VSS+GQ+TELLGMN EAL + G+ + F E G + L RP G+ VTEEE R ++ VR+ ++ V +A A VL K RWV +R L A Sbjct: 171 GGLGWLNSFNQIVSSIGQITELLGMNAEALNFCIGSFVHFLERIGAMCAGIAAMLAPRPTFPPGHPRHGEPPVTEEEEKSRLRR---VRIFQFMVSMA----ALTVLYKGLRWVMRLRSRTTQKLLVA 291
BLAST of EWM21386.1 vs. NCBI_GenBank
Match: gi|673025268|ref|XP_008866595.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|673025270|ref|XP_008866596.1| hypothetical protein H310_04163 [Aphanomyces invadans] >gi|574478161|gb|ETW05157.1| hypothetical protein H310_04163 [Aphanomyces invadans] >gi|574478162|gb|ETW05158.1| hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 63.1586 bits (152), Expect = 1.862e-7 Identity = 38/112 (33.93%), Postives = 58/112 (51.79%), Query Frame = 0 Query: 259 MGGEGSIGWLQNVFHLVSSLGQMTELLGMNTEALGYLFGTLMGFAE----TAGNVLGQLTARPAR---LLEAGQEGVTEEEAAVRAKQEKIVRVVRWAVGLALSYLAWRVLR 363 M G +GWL + VS++GQ+T++LGMN E+L + FG+ + F E N + L+ +P G+ TE+E R ++ VRVV++ L Y A RV R Sbjct: 135 MDPNGHMGWLVSFNQTVSAIGQITQVLGMNAESLNFCFGSFVHFMERMAFLTTNAVAMLSPKPVFPPGHPRYGEPPETEDEIKSRLRR---VRVVKFLFSLVAIYAASRVAR 243 The following BLAST results are available for this feature:
BLAST of EWM21386.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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