EWM21392.1, cds9283 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21392.1 vs. NCBI_GenBank
Match: gi|585101609|gb|EWM21392.1| (Adaptin ear-binding coat-associated protein 1 NECAP-1 [Nannochloropsis gaditana]) HSP 1 Score: 770.385 bits (1988), Expect = 0.000e+0 Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0
Query: 1 MSDAADSLSSSPLGPTLPPNATSPPSRASSPPSITDDTAPPVEQLRLHLREVFVYAVPRLVSSTGYRAEDLNLPNPLLTGYLKAFQRGDTDLFLRIFQPDHTLFAECPIHVLPGKKDPLGSFFIPVVDSSRYFVVKAVDRRRHAFIAIGFRERSDAFDLKALLEDLVTYNARAELARRRTQALDSRAGRPDDGSGREETGDVVGTEDGKEGKDGANGSFLPVFQDLSLKEGETLKLNLVHALEKKEGEGERKEVGRRKHRAGSSELYPGENVRPPSLLPLPPKAMPRRPTDLSVPATQVPVEVPEEEWGDFVGRAEGEGGVKRNRRCDAKRRRGTIHGHTFAAPGARKVGTRFFSATVRAFSVILSLFKKKMLYMLDLSCPRG 383
MSDAADSLSSSPLGPTLPPNATSPPSRASSPPSITDDTAPPVEQLRLHLREVFVYAVPRLVSSTGYRAEDLNLPNPLLTGYLKAFQRGDTDLFLRIFQPDHTLFAECPIHVLPGKKDPLGSFFIPVVDSSRYFVVKAVDRRRHAFIAIGFRERSDAFDLKALLEDLVTYNARAELARRRTQALDSRAGRPDDGSGREETGDVVGTEDGKEGKDGANGSFLPVFQDLSLKEGETLKLNLVHALEKKEGEGERKEVGRRKHRAGSSELYPGENVRPPSLLPLPPKAMPRRPTDLSVPATQVPVEVPEEEWGDFVGRAEGEGGVKRNRRCDAKRRRGTIHGHTFAAPGARKVGTRFFSATVRAFSVILSLFKKKMLYMLDLSCPRG
Sbjct: 1 MSDAADSLSSSPLGPTLPPNATSPPSRASSPPSITDDTAPPVEQLRLHLREVFVYAVPRLVSSTGYRAEDLNLPNPLLTGYLKAFQRGDTDLFLRIFQPDHTLFAECPIHVLPGKKDPLGSFFIPVVDSSRYFVVKAVDRRRHAFIAIGFRERSDAFDLKALLEDLVTYNARAELARRRTQALDSRAGRPDDGSGREETGDVVGTEDGKEGKDGANGSFLPVFQDLSLKEGETLKLNLVHALEKKEGEGERKEVGRRKHRAGSSELYPGENVRPPSLLPLPPKAMPRRPTDLSVPATQVPVEVPEEEWGDFVGRAEGEGGVKRNRRCDAKRRRGTIHGHTFAAPGARKVGTRFFSATVRAFSVILSLFKKKMLYMLDLSCPRG 383
BLAST of EWM21392.1 vs. NCBI_GenBank
Match: gi|299115520|emb|CBN75724.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 109.768 bits (273), Expect = 8.674e-24 Identity = 63/145 (43.45%), Postives = 90/145 (62.07%), Query Frame = 0
Query: 42 VEQLRLHLREVFVYAVPRLVSSTGYRAEDLNLPNPLLTGYLKAFQRGDTDLFLRIFQP--------DHTLFAECPIHVLPGKKDPLGSFFIPVVDSSRYFVVKAVDRR--RHAFIAIGFRERSDAFDLKALLEDLVTYNARAELA 176
+EQ L ++EVFVY VP L +S+G+RAE+ L NP+ TG LK Q G+ LR+F+P LFA+C + + G+ L + V+DSSRYFV++ D+ RHA++ +GFRERS AFD KA+L+D V + R + A
Sbjct: 55 IEQPLLTIKEVFVYRVPPLRASSGHRAEEWGLANPVFTGVLKIAQVGNA-CCLRLFKPPPEGELGATPELFAQCEVRLDGGRT--LQVYVESVIDSSRYFVLRCEDKASGRHAYVGVGFRERSSAFDFKAVLDDFVRFLDRQKRA 196
BLAST of EWM21392.1 vs. NCBI_GenBank
Match: gi|1209687424|gb|OWR43171.1| (Adaptin ear-binding coat-associated protein 1 [Danaus plexippus plexippus]) HSP 1 Score: 103.219 bits (256), Expect = 6.143e-22 Identity = 92/273 (33.70%), Postives = 121/273 (44.32%), Query Frame = 0
Query: 43 EQLRLHLREVFVYAVPRLVSSTGYRAEDLNLPNPLLTGYLKAFQRGDTDLFLRIFQPDHT---LFAECPIHVLPGKKDPLGSFFIPVVDSSRYFVVKAVDRR-RHAFIAIGFRERSDAFDLKALLEDLVTYNARAELARRRTQALDSRAGRPDDGSGREETGDVVGTEDGKEGKDGANGSFLPVFQDLSLKEGETLKLNLVHALEKKEGEGERKEVGRRKHRAGSSELYPGENVRPPSLLPLPPKAMPRRPTDLSVPATQVPVEVPEEEWGDF 311
E + L EVFV+ +P S+ GYRA D NL P TG ++ +GD DL +++ D T LFA+CPI PG V DSSRYFVVK D R A+I +GF +RSD+FDL L+D + +E+ G+ GT D ++ D S KEGET+K+N+ + KK+G R RAG G NV P +P P+ VP VP EWGDF
Sbjct: 5 ESVLLVKNEVFVFKIPPRTSNRGYRAADWNLQEPQWTGRMRLVAKGD-DLIMKL--EDKTSGELFAKCPIDKYPGVA------LEAVTDSSRYFVVKIQDDNGRSAYIGLGFGDRSDSFDLNVALQDHFKW------------------------LRKEQEGE--GTADQQQ-------------MDFSFKEGETIKINM--KITKKDG-----SEASRPRRAG------GANVGGLLPPPPGGSKLPPPPSPQHVPTPAGTPAVPNTEWGDF 216
BLAST of EWM21392.1 vs. NCBI_GenBank
Match: gi|225710570|gb|ACO11131.1| (NECAP-like protein CG9132 [Caligus rogercresseyi]) HSP 1 Score: 102.449 bits (254), Expect = 1.496e-21 Identity = 87/274 (31.75%), Postives = 125/274 (45.62%), Query Frame = 0
Query: 42 VEQLRLHLREVFVYAVPRLVSSTGYRAEDLNLPNPLLTGYLKAFQRGDTDLFLRIFQPDH-TLFAECPIHVLPGKKDPLGSFFIPVVDSSRYFVVKAVDRRRHAFIAIGFRERSDAFDLKALLEDLVTYNARAELARRRTQALDSRAGRPDDGSGREETGDVVGTEDGKEGKDGANGSFLPVFQDLSLKEGETLKLNLVHALEKKEGEGERKEVGRRKHRAGSSELYPGENVR-PPSLLPLPPKAMPRRPTDLSVPATQVPVEVPEEEWGDFVG 313
+E+ L EV VY +P ++ GYRA + +L P TG L+A RG + LR+ + LFA CP+ PG + V+DSSRYFV+ D+ R A+I IGF +R+D+FDL +L D + R E + + DS EDG K DLSLKEG+T +N + KK+G + V + G L P + P + P P + PTD SV + + +E+WG+F G
Sbjct: 4 IERCMLVKNEVHVYKIPPRSTARGYRAANWSLATPDWTGRLRAMARGKS-FELRLEDKNSGELFAACPVEQYPG------TSVEAVLDSSRYFVLCIQDKDRRAYIGIGFADRADSFDLNVVLHDHFKWIKRQEEEKAAVASGDS--------------------EDGTSSKPSL---------DLSLKEGQTFHIN----IPKKDG---VRSVSKNNKPGGGFILPPPSSSSGAPRIAPPPGETPVTSPTDPSVISRNLLDAEEDEDWGEFKG 234
BLAST of EWM21392.1 vs. NCBI_GenBank
Match: gi|225710250|gb|ACO10971.1| (NECAP-like protein CG9132 [Caligus rogercresseyi]) HSP 1 Score: 102.064 bits (253), Expect = 1.888e-21 Identity = 87/274 (31.75%), Postives = 125/274 (45.62%), Query Frame = 0
Query: 42 VEQLRLHLREVFVYAVPRLVSSTGYRAEDLNLPNPLLTGYLKAFQRGDTDLFLRIFQPDH-TLFAECPIHVLPGKKDPLGSFFIPVVDSSRYFVVKAVDRRRHAFIAIGFRERSDAFDLKALLEDLVTYNARAELARRRTQALDSRAGRPDDGSGREETGDVVGTEDGKEGKDGANGSFLPVFQDLSLKEGETLKLNLVHALEKKEGEGERKEVGRRKHRAGSSELYPGENVR-PPSLLPLPPKAMPRRPTDLSVPATQVPVEVPEEEWGDFVG 313
+E+ L EV VY +P ++ GYRA + +L P TG L+A RG + LR+ + LFA CP+ PG + V+DSSRYFV+ D+ R A+I IGF +R+D+FDL +L D + R E + + DS EDG K DLSLKEG+T +N + KK+G + V + G L P + P + P P + PTD SV + + +E+WG+F G
Sbjct: 4 IERCMLVKNEVHVYKIPPRSTARGYRAANWSLATPDWTGRLRAMARGKS-FELRLEDKNSGELFAACPVEQYPG------TSVEAVLDSSRYFVLCIQDKDRRAYIGIGFADRADSFDLNVVLHDHFKWIKRQEEEKAAIASGDS--------------------EDGTSSKPSL---------DLSLKEGQTFHIN----IPKKDG---VRSVSKNNKPGGGFILPPPSSSSGAPRIAPPPGETPVTSPTDPSVISRNLLDAEEDEDWGEFKG 234
BLAST of EWM21392.1 vs. NCBI_GenBank
Match: gi|514689546|ref|XP_004992348.1| (hypothetical protein PTSG_06947 [Salpingoeca rosetta] >gi|326429725|gb|EGD75295.1| hypothetical protein PTSG_06947 [Salpingoeca rosetta]) HSP 1 Score: 102.064 bits (253), Expect = 2.799e-21 Identity = 60/136 (44.12%), Postives = 81/136 (59.56%), Query Frame = 0
Query: 34 ITDDTAPPVEQLRLHLREVFVYAVPRLVSSTGYRAEDLNLPNPLLTGYLKAFQRGDTDLFLRIFQPDHT--LFAECPIHVLPGKKDPLGSFFIPVVDSSRYFVVKAVDRRRHAFIAIGFRERSDAFDLKALLEDLV 167
+ DDT +EQ++L LR+ FVY +P S+ GYRA D L P+ TG +K +G L Q + T LFAE PI + D + PVVDSSRYFVV+ ++ RHAF+ +GF+ERS+AFD L+D V
Sbjct: 1 MADDT---LEQVQLVLRQCFVYRLPPRPSTKGYRAADWGLDKPMWTGRVKVTTKGK--LCTITLQDNATGKLFAEAPI-----RGDEVAKVVEPVVDSSRYFVVRVENQGRHAFLGMGFQERSEAFDFNVALQDFV 126
BLAST of EWM21392.1 vs. NCBI_GenBank
Match: gi|925669266|gb|KOX67522.1| (hypothetical protein WN51_08954 [Melipona quadrifasciata]) HSP 1 Score: 96.6709 bits (239), Expect = 1.781e-19 Identity = 85/273 (31.14%), Postives = 122/273 (44.69%), Query Frame = 0
Query: 43 EQLRLHLREVFVYAVPRLVSSTGYRAEDLNLPNPLLTGYLKAFQRGDTDLFLRIFQPDHTLFAECPIHVLPGKKDPLGSFFIPVVDSSRYFVVKAVDRR-RHAFIAIGFRERSDAFDLKALLEDLVTYNARAELARRRTQALDSRAGRPDDGSGREETGDVVGTEDGKEGKDGANGSFLPVFQDLSLKEGETLKLNLVHALEKKEGEGERKEVGRRKHRAGSSELYPGENVRPPSLLPLPPKAMPRRPTDLSVPATQVPVE---VPEEEWGDF 311
E + L EVFV+ +P ++ GYRA D NL P TG ++ +GD+ + LFA+CPI PG PV DSSRYFV++ D R AFI +GF +RSD+FDL L+D + R + ++ P ++E DL KEGET+K+N+ + KK+G + + K RA ++ P PP + + P P T S PA + PV+ P EWG+F
Sbjct: 5 ESVLLVKSEVFVFKIPPRSTNRGYRAADWNLQEPTWTGRMRLVSQGDSITIKLEDKITGELFAKCPIEQYPGIA------VEPVTDSSRYFVLRIQDDNGRSAFIGVGFLDRSDSFDLNVALQDHFKW-------LRNQEQIEKEKDTP-----KQEL-------------------------DLRFKEGETIKINM--KITKKDGS---EVAAKTKQRANTNLGLPP----PPGGVKIAP---PPAKTPTSSPAHK-PVQNQNQPSSEWGEF 221
BLAST of EWM21392.1 vs. NCBI_GenBank
Match: gi|1059216041|ref|XP_017754825.1| (PREDICTED: NECAP-like protein CG9132 [Eufriesea mexicana] >gi|1026571134|gb|OAD58653.1| hypothetical protein WN48_10537 [Eufriesea mexicana]) HSP 1 Score: 96.2857 bits (238), Expect = 1.988e-19 Identity = 83/280 (29.64%), Postives = 120/280 (42.86%), Query Frame = 0
Query: 43 EQLRLHLREVFVYAVPRLVSSTGYRAEDLNLPNPLLTGYLKAFQRGDTDLFLRIFQPDHTLFAECPIHVLPGKKDPLGSFFIPVVDSSRYFVVKAVDRR-RHAFIAIGFRERSDAFDLKALLEDLVTYNARAELARRRTQALDSRAGRPDDGSGREETGDVVGTEDGKEGKDGANGSFLPVFQDLSLKEGETLKLNLVHALEKKEGEGERKEV-GRRKHRAGSSELYP----GENVRPPSLLPLPPKAMPRRPTDLSVPATQVPVEVPEEEWGDFVGRAE 316
E + L EVFV+ +P ++ GYRA D NL P TG ++ +GD+ + LFA+CPI PG PV DSSRYFV++ D R AFI +GF +RSD+FDL L+D + R + ++ +P ++E DL KEGET+K+N+ + KK+G EV + K RA ++ P G + PP P K P +P EWG+F ++
Sbjct: 5 ESVLLVKSEVFVFKIPPRSTNRGYRAADWNLQEPTWTGCMRLVSQGDSITIKLEDKVTRELFAKCPIEQYPGIA------VEPVTDSSRYFVLRIQDDNGRSAFIGVGFLDRSDSFDLNVALQDHFKW-------LRNQEQIEKEKDKP-----KQEL-------------------------DLRFKEGETIKINM--KITKKDGS----EVSAKTKQRANTNLGLPPPPGGVKIAPP-----PAKTPTSSPAHKPIPNQ----NQTSSEWGEFASASQ 226
BLAST of EWM21392.1 vs. NCBI_GenBank
Match: gi|695427210|ref|XP_009529625.1| (hypothetical protein PHYSODRAFT_316058 [Phytophthora sojae] >gi|348676058|gb|EGZ15876.1| hypothetical protein PHYSODRAFT_316058 [Phytophthora sojae]) HSP 1 Score: 96.6709 bits (239), Expect = 2.356e-19 Identity = 83/289 (28.72%), Postives = 131/289 (45.33%), Query Frame = 0
Query: 42 VEQLRLHLREVFVYAVP-RLVSSTGYRAEDLNLPNPLLTGYLKAFQRGDTDLFLRIFQP------------DHTLFAECPIHVLPGKKDPLGSFFIPVVDSSRYFVVKAVDRR--RHAFIAIGFRERSDAFDLKALLEDLVTYNARAELARRRTQALDSRAGRPDDGSGREETGDVVGTEDGKEGKDGANGSFLPVFQDLSLKEGETLKLNLVHALEKKEG--EGERKEVGRRKHRAGSSELYPGEN-VRPPSLLPLPPKAMPRRPTDLSVPATQVPVEVPEEEWGDFV 312
+E+ + V+ Y VP V+S RA+ + +P LTG ++ QRGD F+++F+P TLFA+CP+ + ++ L + VDSSRYF+++ D + R AF+ IGF +R+ AF+ KA L+D Y R +L + +A E + G+ GS P DLSL +G T+++NL K G +GER R+ +G + P + + PP P A+ + V +E+WGDF
Sbjct: 10 LERALFSEKGVWFYQVPANQVTSLAPRADAWDPEHPFLTGSVRVVQRGDA-CFVQLFEPVAAEQDEAETAATPTLFAQCPLQIT--RELALDVYVHDCVDSSRYFMLRVEDEQSDRRAFVGIGFPDRTAAFNFKATLQDYAKYALR-QLEVEQVEA--------------------------AEQQTGSGGSSSPKKPDLSLPQGTTIRINL-----KTNGAEDGERAATRPRRSSSGGGAVSPAKVPLIPPPPGDSPSTAVKVPAIAPPPAVAEPTTAVDDEDWGDFT 263
BLAST of EWM21392.1 vs. NCBI_GenBank
Match: gi|1173917420|gb|OQR77638.1| (NECAP-like protein [Tropilaelaps mercedesae]) HSP 1 Score: 96.2857 bits (238), Expect = 2.740e-19 Identity = 81/243 (33.33%), Postives = 110/243 (45.27%), Query Frame = 0
Query: 43 EQLRLHLREVFVYAVPRLVSSTGYRAEDLNLPNPLLTGYLKAFQRGDTDLFLRIFQPDH-TLFAECPIHVLPGKKDPLGSFFIPVVDSSRYFVVKAVDRR-RHAFIAIGFRERSDAFDLKALLEDLVTYNARAELARRRTQALDSRAGRPDDGSGREETGDVVGTEDGKEGKDGANGSFLPVFQDLSLKEGETLKLNLVHALEKKEGEGERKEVGRRKHRAGSSE-LYPGENVRPPSLLPLPP 282
E + L EVF+Y +P L ++ GY+A D L P TG LK +G TD L++ + LFA+CPI PG V DSSRYFVV+ D R AFI +GF +RSD+FDL L+D + + +EE D V ++ N P+ DL KEG+T+K++ KK G G + R AG+ L P PP + LPP
Sbjct: 5 ESVLLVKNEVFIYKIPPLTTNKGYKASDWRLDQPDWTGRLKLIAKG-TDCNLKLEDKNTGELFAKCPIEEYPGVA------IESVTDSSRYFVVRLKDDDGRTAFIGLGFADRSDSFDLNVALQDHFKWVHKT----------------------KEE--DAVASQ---------NNGLPPLALDLGFKEGQTIKISC--NFSKKTGSGGSRPRAERSAAAGAGGILLP----PPPGGVKLPP 201 The following BLAST results are available for this feature:
BLAST of EWM21392.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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