EWM21387.1, cds9281 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21387.1 vs. NCBI_GenBank
Match: gi|585101604|gb|EWM21387.1| (hypothetical protein Naga_100215g6 [Nannochloropsis gaditana]) HSP 1 Score: 333.569 bits (854), Expect = 6.395e-116 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
Query: 1 MPIHQSIMMSSKAFASSLLILSFLFASTWAFVPRQLTRTPLQQRGQGRLHMALPGNAMASLGLLLTASTGLYAPSSPPPSFHNQAFTSTTLSKEVESRQGMYKEYTVEKTGQQYENAEGTFKTKDETAGNKNKYVAILAVLLVGSCVIPMAQYFWYVKDD 160
MPIHQSIMMSSKAFASSLLILSFLFASTWAFVPRQLTRTPLQQRGQGRLHMALPGNAMASLGLLLTASTGLYAPSSPPPSFHNQAFTSTTLSKEVESRQGMYKEYTVEKTGQQYENAEGTFKTKDETAGNKNKYVAILAVLLVGSCVIPMAQYFWYVKDD
Sbjct: 1 MPIHQSIMMSSKAFASSLLILSFLFASTWAFVPRQLTRTPLQQRGQGRLHMALPGNAMASLGLLLTASTGLYAPSSPPPSFHNQAFTSTTLSKEVESRQGMYKEYTVEKTGQQYENAEGTFKTKDETAGNKNKYVAILAVLLVGSCVIPMAQYFWYVKDD 160
BLAST of EWM21387.1 vs. NCBI_GenBank
Match: gi|553187891|ref|XP_005854700.1| (hypothetical protein NGA_0347602 [Nannochloropsis gaditana CCMP526] >gi|422294356|gb|EKU21656.1| hypothetical protein NGA_0347602 [Nannochloropsis gaditana CCMP526] >gi|585101605|gb|EWM21388.1| hypothetical protein Naga_100215g6 [Nannochloropsis gaditana]) HSP 1 Score: 318.161 bits (814), Expect = 5.610e-110 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
Query: 8 MMSSKAFASSLLILSFLFASTWAFVPRQLTRTPLQQRGQGRLHMALPGNAMASLGLLLTASTGLYAPSSPPPSFHNQAFTSTTLSKEVESRQGMYKEYTVEKTGQQYENAEGTFKTKDETAGNKNKYVAILAVLLVGSCVIPMAQYFWYVKDD 160
MMSSKAFASSLLILSFLFASTWAFVPRQLTRTPLQQRGQGRLHMALPGNAMASLGLLLTASTGLYAPSSPPPSFHNQAFTSTTLSKEVESRQGMYKEYTVEKTGQQYENAEGTFKTKDETAGNKNKYVAILAVLLVGSCVIPMAQYFWYVKDD
Sbjct: 1 MMSSKAFASSLLILSFLFASTWAFVPRQLTRTPLQQRGQGRLHMALPGNAMASLGLLLTASTGLYAPSSPPPSFHNQAFTSTTLSKEVESRQGMYKEYTVEKTGQQYENAEGTFKTKDETAGNKNKYVAILAVLLVGSCVIPMAQYFWYVKDD 153
BLAST of EWM21387.1 vs. NCBI_GenBank
Match: gi|219109945|ref|XP_002176725.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411260|gb|EEC51188.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 89.7373 bits (221), Expect = 9.849e-20 Identity = 43/86 (50.00%), Postives = 56/86 (65.12%), Query Frame = 0
Query: 75 SSPPPSFHNQAFTSTTLSKEVESRQGMYKEYTVEKTGQQYENAEGTFKTKDETAGNKNKYVAILAVLLVGSCVIPMAQYFWYVKDD 160
S+P F+S+ + E +R+GMY EYT + Q Y++A TFK ET K KY A+LAVL+VGS +IPMAQYFWYV+DD
Sbjct: 53 SAPAADALTPVFSSSNVVAEKVTREGMYGEYTTDLV-QTYDDARSTFKDAKETKSKKGKYTALLAVLIVGSFIIPMAQYFWYVRDD 137
BLAST of EWM21387.1 vs. NCBI_GenBank
Match: gi|223999747|ref|XP_002289546.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974754|gb|EED93083.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 89.3521 bits (220), Expect = 1.632e-19 Identity = 39/75 (52.00%), Postives = 54/75 (72.00%), Query Frame = 0
Query: 86 FTSTTLSKEVESRQGMYKEYTVEKTGQQYENAEGTFKTKDETAGNKNKYVAILAVLLVGSCVIPMAQYFWYVKDD 160
F S+ L E +R+G+Y+EY V+ Q +++A T+K+ ET K KY A++AVL+VGS +IPMAQYFWYVKDD
Sbjct: 68 FGSSNLVAERVTREGLYREYDVDVGDQVFDDARSTYKSAKETKTKKGKYTALIAVLVVGSFIIPMAQYFWYVKDD 142
BLAST of EWM21387.1 vs. NCBI_GenBank
Match: gi|1072236428|gb|OEU21156.1| (hypothetical protein FRACYDRAFT_206263 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 88.1965 bits (217), Expect = 4.806e-19 Identity = 48/109 (44.04%), Postives = 66/109 (60.55%), Query Frame = 0
Query: 53 LPGNAMASLGLLLTASTGLYAPSSPPPSFHNQAF-TSTTLSKEVESRQGMYKEYTVEKTGQQYENAEGTFKTKDETAGNKNKYVAILAVLLVGSCVIPMAQYFWYVKDD 160
L +A+ ++ + S+ L P + QAF +STT+ E R+G+YKEY Q ++A TFK+ ET K KY AILA+L+VGS +IPMAQYFWYV+DD
Sbjct: 36 LKKHAVNTMAAIAIGSSVLTTPM-VADALETQAFFSSTTVVAEKVVREGIYKEYEAL-IDQDVDDARSTFKSAKETKSKKGKYTAILAILVVGSFIIPMAQYFWYVRDD 142
BLAST of EWM21387.1 vs. NCBI_GenBank
Match: gi|1210519388|dbj|GAX21772.1| (hypothetical protein FisN_31Lh061 [Fistulifera solaris]) HSP 1 Score: 87.0409 bits (214), Expect = 8.782e-19 Identity = 41/84 (48.81%), Postives = 59/84 (70.24%), Query Frame = 0
Query: 77 PPPSFHNQAFTSTTLSKEVESRQGMYKEYTVEKTGQQYENAEGTFKTKDETAGNKNKYVAILAVLLVGSCVIPMAQYFWYVKDD 160
PP + AF + L+++V R+G+Y EY ++ Q+Y++A TFK+ ET K KY A+LA+L+VGS +IPMAQY+WYVKDD
Sbjct: 55 PPAANAVPAFPTQVLAEKV-IREGVYGEYEIDLPEQKYDDARSTFKSAKETKTKKGKYTALLAILIVGSFIIPMAQYWWYVKDD 137
BLAST of EWM21387.1 vs. NCBI_GenBank
Match: gi|397647573|gb|EJK77761.1| (hypothetical protein THAOC_00385 [Thalassiosira oceanica]) HSP 1 Score: 86.2705 bits (212), Expect = 2.246e-18 Identity = 39/75 (52.00%), Postives = 52/75 (69.33%), Query Frame = 0
Query: 86 FTSTTLSKEVESRQGMYKEYTVEKTGQQYENAEGTFKTKDETAGNKNKYVAILAVLLVGSCVIPMAQYFWYVKDD 160
F S++L E R+G+Y EY V+ Q Y++A FK+ ET K KY A++AVL+VGS +IPMAQYFWYV+DD
Sbjct: 67 FGSSSLVAERVKREGIYGEYEVDLGDQVYDDASSKFKSAKETKSKKGKYTALIAVLVVGSFIIPMAQYFWYVRDD 141
BLAST of EWM21387.1 vs. NCBI_GenBank
Match: gi|1210530526|dbj|GAX10853.1| (hypothetical protein FisN_31Hh061 [Fistulifera solaris]) HSP 1 Score: 85.8853 bits (211), Expect = 2.731e-18 Identity = 39/76 (51.32%), Postives = 56/76 (73.68%), Query Frame = 0
Query: 85 AFTSTTLSKEVESRQGMYKEYTVEKTGQQYENAEGTFKTKDETAGNKNKYVAILAVLLVGSCVIPMAQYFWYVKDD 160
AF + L+++V R+G+Y EY ++ Q+Y++A TFK+ ET K KY A+LA+L+VGS +IPMAQY+WYVKDD
Sbjct: 62 AFPTQVLAEKV-IREGVYGEYEIDLPEQKYDDARSTFKSAKETKTKKGKYTALLAILIVGSFIIPMAQYWWYVKDD 136
BLAST of EWM21387.1 vs. NCBI_GenBank
Match: gi|299117489|emb|CBN73992.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 72.7886 bits (177), Expect = 3.338e-13 Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 0
Query: 96 ESRQGMYKEYTVEKTGQQYENAEG--TFKTKDETAGNKNKYVAILAVLLVGSCVIPMAQYFWYVKDD 160
E+R+G+Y Y VE + E G TFK K+ET ++KY ++LAVLL GS VIPM QY+WY++DD
Sbjct: 88 ETREGLYGPYEVEVQERAPETDFGISTFKKKEETEEGRDKYTSVLAVLLAGSFVIPMVQYWWYIRDD 154
BLAST of EWM21387.1 vs. NCBI_GenBank
Match: gi|397570730|gb|EJK47438.1| (hypothetical protein THAOC_33840, partial [Thalassiosira oceanica]) HSP 1 Score: 64.3142 bits (155), Expect = 2.704e-10 Identity = 31/66 (46.97%), Postives = 43/66 (65.15%), Query Frame = 0
Query: 86 FTSTTLSKEVESRQGMYKEYTVEKTGQQYENAEGTFKTKDETAGNKNKYVAILAVLLVGSCVIPMA 151
F S++L E R+G+Y EY V+ Q Y++A FK+ ET K KY A++AVL+VGS +IPMA
Sbjct: 67 FGSSSLVAERVKREGIYGEYEVDLGDQVYDDASSKFKSAKETKSKKGKYTALIAVLVVGSFIIPMA 132 The following BLAST results are available for this feature:
BLAST of EWM21387.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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