EWM21401.1, cds9270 (CDS) Nannochloropsis gaditana

Overview
NameEWM21401.1
Unique Namecds9270
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:322258..322311 +
Alignment locationKK037252.1:322709..323866 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21401.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100300g5.3768.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:322258..322311 +
KK037252.1supercontigKK037252.1:322709..323866 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21401.1 vs. NCBI_GenBank
Match: gi|585101622|gb|EWM21401.1| (hypothetical protein Naga_100300g5 [Nannochloropsis gaditana])

HSP 1 Score: 804.668 bits (2077), Expect = 0.000e+0
Identity = 403/403 (100.00%), Postives = 403/403 (100.00%), Query Frame = 0 
Query:    1 MRNGKSSVGGGNTTINYADVAHTTVTTPVASKSVGGAKRKQAAITKNERRHPEAGARTGGDRAGGPTVRDVAVDKENRRRQGATGGNGRDKEEMGRERAGGDLSKAAKRAKPSGPITSVPPPPSHPQSSPSAPSSSSSSASGAQPASVRYPRLNYAEAVPPTERTFISPDVPDTDKLLYLASRVMEADTLQVERMLMSTKYQHLSHEMEKYAGMVGKRLRRVLEEDARAEVAELGELERLRRERREAVAACDALDEEAGKLRKVLRIWEEMDREMEVEGGRFTDQVGAARAAEMERAEGALASQERSRTGGTETAAGYTSPVTEETLTLLAQGPGIRAHILESAGQLVDALEGKVAEVRQVEEAAKGQQKALAAAFRAVSFAGIPAMGEPAVALKRAGGGKIK 403
            MRNGKSSVGGGNTTINYADVAHTTVTTPVASKSVGGAKRKQAAITKNERRHPEAGARTGGDRAGGPTVRDVAVDKENRRRQGATGGNGRDKEEMGRERAGGDLSKAAKRAKPSGPITSVPPPPSHPQSSPSAPSSSSSSASGAQPASVRYPRLNYAEAVPPTERTFISPDVPDTDKLLYLASRVMEADTLQVERMLMSTKYQHLSHEMEKYAGMVGKRLRRVLEEDARAEVAELGELERLRRERREAVAACDALDEEAGKLRKVLRIWEEMDREMEVEGGRFTDQVGAARAAEMERAEGALASQERSRTGGTETAAGYTSPVTEETLTLLAQGPGIRAHILESAGQLVDALEGKVAEVRQVEEAAKGQQKALAAAFRAVSFAGIPAMGEPAVALKRAGGGKIK
Sbjct:    1 MRNGKSSVGGGNTTINYADVAHTTVTTPVASKSVGGAKRKQAAITKNERRHPEAGARTGGDRAGGPTVRDVAVDKENRRRQGATGGNGRDKEEMGRERAGGDLSKAAKRAKPSGPITSVPPPPSHPQSSPSAPSSSSSSASGAQPASVRYPRLNYAEAVPPTERTFISPDVPDTDKLLYLASRVMEADTLQVERMLMSTKYQHLSHEMEKYAGMVGKRLRRVLEEDARAEVAELGELERLRRERREAVAACDALDEEAGKLRKVLRIWEEMDREMEVEGGRFTDQVGAARAAEMERAEGALASQERSRTGGTETAAGYTSPVTEETLTLLAQGPGIRAHILESAGQLVDALEGKVAEVRQVEEAAKGQQKALAAAFRAVSFAGIPAMGEPAVALKRAGGGKIK 403
The following BLAST results are available for this feature:
BLAST of EWM21401.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101622|gb|EWM21401.1|0.000e+0100.00hypothetical protein Naga_100300g5 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9300rna9300Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications