EWM21415.1, cds9249 (CDS) Nannochloropsis gaditana

Overview
NameEWM21415.1
Unique Namecds9249
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:272177..272209 +
Alignment locationKK037252.1:272556..273458 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21415.1
Productras-related gtp binding c
Orig transcript idgnl|cribi|Naga_100147g9.4596.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:272177..272209 +
KK037252.1supercontigKK037252.1:272556..273458 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR006762Gtr1_RagA
Homology
[Close]
BLAST of EWM21415.1 vs. NCBI_GenBank
Match: gi|585101643|gb|EWM21415.1| (ras-related gtp binding c [Nannochloropsis gaditana])

HSP 1 Score: 641.343 bits (1653), Expect = 0.000e+0
Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0 
Query:    1 MALEYTDEQQMLTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYGYVVGEERQAGGPLGRNMIFG 311
            MALEYTDEQQMLTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYGYVVGEERQAGGPLGRNMIFG
Sbjct:    1 MALEYTDEQQMLTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYGYVVGEERQAGGPLGRNMIFG 311
[Close]
BLAST of EWM21415.1 vs. NCBI_GenBank
Match: gi|585101644|gb|EWM21416.1| (ras-related gtp binding c [Nannochloropsis gaditana])

HSP 1 Score: 618.231 bits (1593), Expect = 0.000e+0
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0 
Query:   12 LTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYGYVVGEERQAGGPLGRNMIFG 311
            LTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYGYVVGEERQAGGPLGRNMIFG
Sbjct:    8 LTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYGYVVGEERQAGGPLGRNMIFG 307
[Close]
BLAST of EWM21415.1 vs. NCBI_GenBank
Match: gi|585101642|gb|EWM21414.1| (ras-related gtp binding c [Nannochloropsis gaditana])

HSP 1 Score: 607.06 bits (1564), Expect = 0.000e+0
Identity = 295/304 (97.04%), Postives = 297/304 (97.70%), Query Frame = 0 
Query:    1 MALEYTDEQQMLTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYGYVVGEERQAGGPL 304
            MALEYTDEQQMLTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYG     E +A GP+
Sbjct:    1 MALEYTDEQQMLTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYGVKYDAEGEAQGPV 304
[Close]
BLAST of EWM21415.1 vs. NCBI_GenBank
Match: gi|553190918|ref|XP_005855291.1| (ras-related gtp binding c [Nannochloropsis gaditana CCMP526] >gi|422293769|gb|EKU21069.1| ras-related gtp binding c [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 547.74 bits (1410), Expect = 0.000e+0
Identity = 293/304 (96.38%), Postives = 295/304 (97.04%), Query Frame = 0 
Query:    1 MALEYTDEQQMLTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYGYVVGEERQAGGPL 304
            MALEYTDEQQMLTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFL FQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKE ELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYG     E +A GP+
Sbjct:    1 MALEYTDEQQMLTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLHFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKERELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYGVKYDAEGEAQGPV 304
[Close]
BLAST of EWM21415.1 vs. NCBI_GenBank
Match: gi|301119979|ref|XP_002907717.1| (ras-like GTP-binding protein [Phytophthora infestans T30-4] >gi|262106229|gb|EEY64281.1| ras-like GTP-binding protein [Phytophthora infestans T30-4])

HSP 1 Score: 343.969 bits (881), Expect = 2.394e-114
Identity = 173/287 (60.28%), Postives = 211/287 (73.52%), Query Frame = 0 
Query:    5 YTDEQQMLTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYG 291
            Y DE   LT   KPRILLMG RRSGK+SI RVVF KM PHETLFLE T+++DI+   NN F+QFQIWDFPGD+ F    + G +   G R L         G     G+L++E  +F    ++VFV+DAQDEPY EAL RL D V R    NP +   VFIHKVDGDLFLSD+HK+DCQR++Q +I  E+ D  L+ + +S +LTSIYDHSIFEAFSK+VQ+L  QLP +ENLLN LI++C MEKSFLFDVVS++Y+ATDSNPVDMQ+YE+C DMIDVV+DVSCIYG
Sbjct:   20 YGDEATALTGENKPRILLMGLRRSGKSSIQRVVFHKMSPHETLFLEGTNSLDIKYIANNSFVQFQIWDFPGDYDF----KGGSKLTRGRRVLVVYAEDLVYG-----GQLVNEEMIFSNCGSIVFVIDAQDEPYAEALARLHDTVTRAHRYNPDILFEVFIHKVDGDLFLSDDHKIDCQREIQQQIMDEINDGELD-IHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILITSCNMEKSFLFDVVSKVYIATDSNPVDMQSYELCSDMIDVVIDVSCIYG 296
[Close]
BLAST of EWM21415.1 vs. NCBI_GenBank
Match: gi|698796844|ref|XP_009831451.1| (hypothetical protein H257_07576 [Aphanomyces astaci] >gi|574113242|gb|ETV78732.1| hypothetical protein H257_07576 [Aphanomyces astaci])

HSP 1 Score: 341.658 bits (875), Expect = 1.059e-113
Identity = 168/276 (60.87%), Postives = 206/276 (74.64%), Query Frame = 0 
Query:   16 TKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYG 291
             KPRILLMG RRSGK+SI RVVF KM PHETLFLE T+++DI+   NN F+QFQIWDFPGDF F                         + +    G+L++E  +FG   A+VFV+DAQD+PY EALTRL D VAR    NP++   VFIHKVDGDLF+SD+HK+DCQRD+Q +I +E++D  L+ + +S +LTSIYDHSIFEAFSK+VQ+L  QLP +ENLLN LIS C MEKSFLFDVVS++Y+ATDSNPVDMQ+YE+C DMIDVV+DVSCIYG
Sbjct:   32 NKPRILLMGLRRSGKSSIQRVVFHKMSPHETLFLEGTNSLDIKYIANNSFVQFQIWDFPGDFDF-------------------------KDDLVYGGQLVNEEMIFGNCGAIVFVIDAQDDPYSEALTRLHDTVARAHRYNPNVFFEVFIHKVDGDLFISDDHKIDCQRDIQQQITEEIQDGDLD-IHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILISRCNMEKSFLFDVVSKVYIATDSNPVDMQSYELCSDMIDVVIDVSCIYG 281
[Close]
BLAST of EWM21415.1 vs. NCBI_GenBank
Match: gi|673048535|ref|XP_008878228.1| (hypothetical protein H310_12805 [Aphanomyces invadans] >gi|574466174|gb|ETV93206.1| hypothetical protein H310_12805 [Aphanomyces invadans])

HSP 1 Score: 340.117 bits (871), Expect = 4.934e-113
Identity = 167/276 (60.51%), Postives = 206/276 (74.64%), Query Frame = 0 
Query:   16 TKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYG 291
             KPRILLMG RRSGK+SI RVVF KM PHETLFLE T+++DI+   NN F+QFQIWDFPGDF F                         + +    G+L++E  +FG   A+VFV+DAQD+PY EALTRL D VAR    NP++   VFIHKVDGDLF+SD+HK+DCQRD+Q +I +E+++  L+ + +S +LTSIYDHSIFEAFSK+VQ+L  QLP +ENLLN LIS C MEKSFLFDVVS++Y+ATDSNPVDMQ+YE+C DMIDVV+DVSCIYG
Sbjct:   32 NKPRILLMGLRRSGKSSIQRVVFHKMSPHETLFLEGTNSLDIKYIANNSFVQFQIWDFPGDFDF-------------------------KDDLVYGGQLVNEEMIFGNCGAIVFVIDAQDDPYSEALTRLHDTVARAHRYNPNVFFEVFIHKVDGDLFISDDHKIDCQRDIQQQITEEIQEGDLD-IHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILISRCNMEKSFLFDVVSKVYIATDSNPVDMQSYELCSDMIDVVIDVSCIYG 281
[Close]
BLAST of EWM21415.1 vs. NCBI_GenBank
Match: gi|675177131|ref|XP_008897450.1| (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|675177133|ref|XP_008897451.1| hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >gi|566010877|gb|ETI33788.1| hypothetical protein, variant 2 [Phytophthora parasitica P1569] >gi|566010878|gb|ETI33789.1| hypothetical protein, variant 3 [Phytophthora parasitica P1569] >gi|567948410|gb|ETK74158.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|567948411|gb|ETK74159.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|567977077|gb|ETL27588.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|567977078|gb|ETL27589.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|568006572|gb|ETL80826.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568036417|gb|ETM34027.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568036418|gb|ETM34028.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|568103283|gb|ETN17954.1| hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|568103284|gb|ETN17955.1| hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >gi|570314666|gb|ETO62614.1| hypothetical protein, variant 2 [Phytophthora parasitica P1976] >gi|570314667|gb|ETO62615.1| hypothetical protein, variant 3 [Phytophthora parasitica P1976] >gi|570938430|gb|ETP03687.1| hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >gi|570938431|gb|ETP03688.1| hypothetical protein, variant 3 [Phytophthora parasitica CJ01A1] >gi|570968717|gb|ETP31836.1| hypothetical protein, variant 2 [Phytophthora parasitica P10297] >gi|570968718|gb|ETP31837.1| hypothetical protein, variant 3 [Phytophthora parasitica P10297])

HSP 1 Score: 339.347 bits (869), Expect = 9.189e-113
Identity = 169/287 (58.89%), Postives = 205/287 (71.43%), Query Frame = 0 
Query:    5 YTDEQQMLTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYG 291
            Y DE   LT   KPRILLMG RRSGK+SI RVVF KM PHETLFLE T+++DI+   NN F+QFQIWDFPGD+ F      G                         G+L++E  +F    ++VFV+DAQDEPY EAL RL D V R    NP +   VFIHKVDGDLFLSD+HK+DCQR++Q +I  E+ D  L+ + +S +LTSIYDHSIFEAFSK+VQ+L  QLP +ENLLN LI++C MEKSFLFDVVS++Y+ATDSNPVDMQ+YE+C DMIDVV+DVSCIYG
Sbjct:   19 YGDEATALTGENKPRILLMGLRRSGKSSIQRVVFHKMSPHETLFLEGTNSLDIKYIANNSFVQFQIWDFPGDYDFKEDLVYG-------------------------GQLVNEEMIFSNCGSIVFVIDAQDEPYAEALARLHDTVTRAHRYNPDILFEVFIHKVDGDLFLSDDHKIDCQREIQQQIMDEINDGELD-IHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILITSCNMEKSFLFDVVSKVYIATDSNPVDMQSYELCSDMIDVVIDVSCIYG 279
[Close]
BLAST of EWM21415.1 vs. NCBI_GenBank
Match: gi|695381213|ref|XP_009517018.1| (hypothetical protein PHYSODRAFT_552896 [Phytophthora sojae] >gi|348689929|gb|EGZ29743.1| hypothetical protein PHYSODRAFT_552896 [Phytophthora sojae])

HSP 1 Score: 339.347 bits (869), Expect = 1.036e-112
Identity = 169/287 (58.89%), Postives = 205/287 (71.43%), Query Frame = 0 
Query:    5 YTDEQQMLTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYG 291
            Y DE   LT   KPRILLMG RRSGK+SI RVVF KM PHETLFLE T+++DI+   NN F+QFQIWDFPGD+ F      G                         G+L++E  +F    ++VFV+DAQDEPY EAL RL D V R    NP +   VFIHKVDGDLFLSD+HK+DCQR++Q +I  E+ D  L+ + +S +LTSIYDHSIFEAFSK+VQ+L  QLP +ENLLN LI++C MEKSFLFDVVS++Y+ATDSNPVDMQ+YE+C DMIDVV+DVSCIYG
Sbjct:   19 YGDEATALTGENKPRILLMGLRRSGKSSIQRVVFHKMSPHETLFLEGTNSLDIKYIANNSFVQFQIWDFPGDYDFKEDLVYG-------------------------GQLVNEEMIFSNCGSIVFVIDAQDEPYAEALARLHDTVTRAHRYNPDILFEVFIHKVDGDLFLSDDHKIDCQREIQQQIMDEINDGELD-IHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILITSCNMEKSFLFDVVSKVYIATDSNPVDMQSYELCSDMIDVVIDVSCIYG 279
[Close]
BLAST of EWM21415.1 vs. NCBI_GenBank
Match: gi|675177127|ref|XP_008897448.1| (hypothetical protein PPTG_05609 [Phytophthora parasitica INRA-310] >gi|675177129|ref|XP_008897449.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|566010875|gb|ETI33786.1| hypothetical protein F443_19549 [Phytophthora parasitica P1569] >gi|566010876|gb|ETI33787.1| hypothetical protein, variant 1 [Phytophthora parasitica P1569] >gi|567948408|gb|ETK74156.1| hypothetical protein L915_18968 [Phytophthora parasitica] >gi|567948409|gb|ETK74157.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567977075|gb|ETL27586.1| hypothetical protein L916_18866 [Phytophthora parasitica] >gi|567977076|gb|ETL27587.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568006571|gb|ETL80825.1| hypothetical protein L917_18693 [Phytophthora parasitica] >gi|568036415|gb|ETM34025.1| hypothetical protein L914_18783 [Phytophthora parasitica] >gi|568036416|gb|ETM34026.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568103281|gb|ETN17952.1| hypothetical protein PPTG_05609 [Phytophthora parasitica INRA-310] >gi|568103282|gb|ETN17953.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|570314664|gb|ETO62612.1| hypothetical protein F444_19501 [Phytophthora parasitica P1976] >gi|570314665|gb|ETO62613.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976] >gi|570938428|gb|ETP03685.1| hypothetical protein F441_19370 [Phytophthora parasitica CJ01A1] >gi|570938429|gb|ETP03686.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >gi|570968715|gb|ETP31834.1| hypothetical protein F442_19321 [Phytophthora parasitica P10297] >gi|570968716|gb|ETP31835.1| hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 338.576 bits (867), Expect = 1.692e-112
Identity = 169/287 (58.89%), Postives = 205/287 (71.43%), Query Frame = 0 
Query:    5 YTDEQQMLTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYG 291
            Y DE   LT   KPRILLMG RRSGK+SI RVVF KM PHETLFLE T+++DI+   NN F+QFQIWDFPGD+ F      G                         G+L++E  +F    ++VFV+DAQDEPY EAL RL D V R    NP +   VFIHKVDGDLFLSD+HK+DCQR++Q +I  E+ D  L+ + +S +LTSIYDHSIFEAFSK+VQ+L  QLP +ENLLN LI++C MEKSFLFDVVS++Y+ATDSNPVDMQ+YE+C DMIDVV+DVSCIYG
Sbjct:   19 YGDEATALTGENKPRILLMGLRRSGKSSIQRVVFHKMSPHETLFLEGTNSLDIKYIANNSFVQFQIWDFPGDYDFKEDLVYG-------------------------GQLVNEEMIFSNCGSIVFVIDAQDEPYAEALARLHDTVTRAHRYNPDILFEVFIHKVDGDLFLSDDHKIDCQREIQQQIMDEINDGELD-IHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILITSCNMEKSFLFDVVSKVYIATDSNPVDMQSYELCSDMIDVVIDVSCIYG 279
The following BLAST results are available for this feature:
BLAST of EWM21415.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101643|gb|EWM21415.1|0.000e+0100.00ras-related gtp binding c [Nannochloropsis gaditan... [more]
gi|585101644|gb|EWM21416.1|0.000e+0100.00ras-related gtp binding c [Nannochloropsis gaditan... [more]
gi|585101642|gb|EWM21414.1|0.000e+097.04ras-related gtp binding c [Nannochloropsis gaditan... [more]
gi|553190918|ref|XP_005855291.1|0.000e+096.38ras-related gtp binding c [Nannochloropsis gaditan... [more]
gi|301119979|ref|XP_002907717.1|2.394e-11460.28ras-like GTP-binding protein [Phytophthora infesta... [more]
gi|698796844|ref|XP_009831451.1|1.059e-11360.87hypothetical protein H257_07576 [Aphanomyces astac... [more]
gi|673048535|ref|XP_008878228.1|4.934e-11360.51hypothetical protein H310_12805 [Aphanomyces invad... [more]
gi|675177131|ref|XP_008897450.1|9.189e-11358.89hypothetical protein, variant 2 [Phytophthora para... [more]
gi|695381213|ref|XP_009517018.1|1.036e-11258.89hypothetical protein PHYSODRAFT_552896 [Phytophtho... [more]
gi|675177127|ref|XP_008897448.1|1.692e-11258.89hypothetical protein PPTG_05609 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9279rna9279Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications