EWM21416.1, cds9248 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21416.1 vs. NCBI_GenBank
Match: gi|585101644|gb|EWM21416.1| (ras-related gtp binding c [Nannochloropsis gaditana]) HSP 1 Score: 630.943 bits (1626), Expect = 0.000e+0 Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0 Query: 1 MIFSVPQLTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYGYVVGEERQAGGPLGRNMIFG 307 MIFSVPQLTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYGYVVGEERQAGGPLGRNMIFG Sbjct: 1 MIFSVPQLTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYGYVVGEERQAGGPLGRNMIFG 307
BLAST of EWM21416.1 vs. NCBI_GenBank
Match: gi|585101643|gb|EWM21415.1| (ras-related gtp binding c [Nannochloropsis gaditana]) HSP 1 Score: 618.231 bits (1593), Expect = 0.000e+0 Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0 Query: 8 LTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYGYVVGEERQAGGPLGRNMIFG 307 LTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYGYVVGEERQAGGPLGRNMIFG Sbjct: 12 LTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYGYVVGEERQAGGPLGRNMIFG 311
BLAST of EWM21416.1 vs. NCBI_GenBank
Match: gi|585101642|gb|EWM21414.1| (ras-related gtp binding c [Nannochloropsis gaditana]) HSP 1 Score: 583.948 bits (1504), Expect = 0.000e+0 Identity = 284/293 (96.93%), Postives = 286/293 (97.61%), Query Frame = 0 Query: 8 LTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYGYVVGEERQAGGPL 300 LTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYG E +A GP+ Sbjct: 12 LTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYGVKYDAEGEAQGPV 304
BLAST of EWM21416.1 vs. NCBI_GenBank
Match: gi|553190918|ref|XP_005855291.1| (ras-related gtp binding c [Nannochloropsis gaditana CCMP526] >gi|422293769|gb|EKU21069.1| ras-related gtp binding c [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 525.013 bits (1351), Expect = 0.000e+0 Identity = 282/293 (96.25%), Postives = 284/293 (96.93%), Query Frame = 0 Query: 8 LTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYGYVVGEERQAGGPL 300 LTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFL FQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKE ELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYG E +A GP+ Sbjct: 12 LTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLHFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKERELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYGVKYDAEGEAQGPV 304
BLAST of EWM21416.1 vs. NCBI_GenBank
Match: gi|698796844|ref|XP_009831451.1| (hypothetical protein H257_07576 [Aphanomyces astaci] >gi|574113242|gb|ETV78732.1| hypothetical protein H257_07576 [Aphanomyces astaci]) HSP 1 Score: 341.273 bits (874), Expect = 1.212e-113 Identity = 169/280 (60.36%), Postives = 208/280 (74.29%), Query Frame = 0 Query: 8 LTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYG 287 L+ KPRILLMG RRSGK+SI RVVF KM PHETLFLE T+++DI+ NN F+QFQIWDFPGDF F + + G+L++E +FG A+VFV+DAQD+PY EALTRL D VAR NP++ VFIHKVDGDLF+SD+HK+DCQRD+Q +I +E++D L+ + +S +LTSIYDHSIFEAFSK+VQ+L QLP +ENLLN LIS C MEKSFLFDVVS++Y+ATDSNPVDMQ+YE+C DMIDVV+DVSCIYG Sbjct: 28 LSGENKPRILLMGLRRSGKSSIQRVVFHKMSPHETLFLEGTNSLDIKYIANNSFVQFQIWDFPGDFDF-------------------------KDDLVYGGQLVNEEMIFGNCGAIVFVIDAQDDPYSEALTRLHDTVARAHRYNPNVFFEVFIHKVDGDLFISDDHKIDCQRDIQQQITEEIQDGDLD-IHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILISRCNMEKSFLFDVVSKVYIATDSNPVDMQSYELCSDMIDVVIDVSCIYG 281
BLAST of EWM21416.1 vs. NCBI_GenBank
Match: gi|673048535|ref|XP_008878228.1| (hypothetical protein H310_12805 [Aphanomyces invadans] >gi|574466174|gb|ETV93206.1| hypothetical protein H310_12805 [Aphanomyces invadans]) HSP 1 Score: 339.732 bits (870), Expect = 6.649e-113 Identity = 167/276 (60.51%), Postives = 206/276 (74.64%), Query Frame = 0 Query: 12 TKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYG 287 KPRILLMG RRSGK+SI RVVF KM PHETLFLE T+++DI+ NN F+QFQIWDFPGDF F + + G+L++E +FG A+VFV+DAQD+PY EALTRL D VAR NP++ VFIHKVDGDLF+SD+HK+DCQRD+Q +I +E+++ L+ + +S +LTSIYDHSIFEAFSK+VQ+L QLP +ENLLN LIS C MEKSFLFDVVS++Y+ATDSNPVDMQ+YE+C DMIDVV+DVSCIYG Sbjct: 32 NKPRILLMGLRRSGKSSIQRVVFHKMSPHETLFLEGTNSLDIKYIANNSFVQFQIWDFPGDFDF-------------------------KDDLVYGGQLVNEEMIFGNCGAIVFVIDAQDDPYSEALTRLHDTVARAHRYNPNVFFEVFIHKVDGDLFISDDHKIDCQRDIQQQITEEIQEGDLD-IHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILISRCNMEKSFLFDVVSKVYIATDSNPVDMQSYELCSDMIDVVIDVSCIYG 281
BLAST of EWM21416.1 vs. NCBI_GenBank
Match: gi|301119979|ref|XP_002907717.1| (ras-like GTP-binding protein [Phytophthora infestans T30-4] >gi|262106229|gb|EEY64281.1| ras-like GTP-binding protein [Phytophthora infestans T30-4]) HSP 1 Score: 338.576 bits (867), Expect = 2.941e-112 Identity = 170/280 (60.71%), Postives = 208/280 (74.29%), Query Frame = 0 Query: 8 LTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYG 287 LT KPRILLMG RRSGK+SI RVVF KM PHETLFLE T+++DI+ NN F+QFQIWDFPGD+ F + G + G R L G G+L++E +F ++VFV+DAQDEPY EAL RL D V R NP + VFIHKVDGDLFLSD+HK+DCQR++Q +I E+ D L+ + +S +LTSIYDHSIFEAFSK+VQ+L QLP +ENLLN LI++C MEKSFLFDVVS++Y+ATDSNPVDMQ+YE+C DMIDVV+DVSCIYG Sbjct: 27 LTGENKPRILLMGLRRSGKSSIQRVVFHKMSPHETLFLEGTNSLDIKYIANNSFVQFQIWDFPGDYDF----KGGSKLTRGRRVLVVYAEDLVYG-----GQLVNEEMIFSNCGSIVFVIDAQDEPYAEALARLHDTVTRAHRYNPDILFEVFIHKVDGDLFLSDDHKIDCQREIQQQIMDEINDGELD-IHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILITSCNMEKSFLFDVVSKVYIATDSNPVDMQSYELCSDMIDVVIDVSCIYG 296
BLAST of EWM21416.1 vs. NCBI_GenBank
Match: gi|1173946276|gb|OQR94823.1| (ras-like GTP-binding protein [Achlya hypogyna]) HSP 1 Score: 335.88 bits (860), Expect = 2.134e-111 Identity = 167/280 (59.64%), Postives = 204/280 (72.86%), Query Frame = 0 Query: 8 LTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYG 287 L+ KPRILLMG RRSGK+SI RVVF KM PHETLFLE T+++DI+ NN F+QFQIWDFPGDF F G G+L++E +FG A+VFV+DAQDEPY +AL RL D V R NP++ VFIHKVDGDLFLSD+HK+DCQR++Q +I E+ D L+ + +S +LTSIYDHSIFEAFSK+VQ+L QLP +ENLLN LI++C MEKSFLFDVVS++Y+ATDSNPVDMQ+YE+C DMIDVV+DVSCIYG Sbjct: 26 LSGENKPRILLMGLRRSGKSSIQRVVFHKMSPHETLFLEGTNSLDIKYIANNSFVQFQIWDFPGDFEFKDDLVYG-------------------------GQLVNEEMIFGNCGAIVFVIDAQDEPYADALARLHDTVTRAHRYNPNIFFEVFIHKVDGDLFLSDDHKIDCQREIQQQIMDEVNDGELD-IHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILITSCNMEKSFLFDVVSKVYIATDSNPVDMQSYELCSDMIDVVIDVSCIYG 279
BLAST of EWM21416.1 vs. NCBI_GenBank
Match: gi|669157178|ref|XP_008614151.1| (Ras-like GTP-binding protein C [Saprolegnia diclina VS20] >gi|530733968|gb|EQC32210.1| Ras-like GTP-binding protein C [Saprolegnia diclina VS20]) HSP 1 Score: 335.495 bits (859), Expect = 2.484e-111 Identity = 166/280 (59.29%), Postives = 204/280 (72.86%), Query Frame = 0 Query: 8 LTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYG 287 L+ KPRILLMG RRSGK+SI RVVF KM PHETLFLE T+ +DI+ NN F+QFQIWDFPGDF F G G+L++E +FG A+VFV+DAQDEPY +AL+RL D V R NP++ VFIHKVDGDLF+SD+HK+DCQR++Q ++ E+ D L+ + +S +LTSIYDHSIFEAFSK+VQ+L QLP +ENLLN LIS+C MEKSFLFDVVS++Y+ATDSNPVDMQ+YE+C DMIDVV+DVSCIYG Sbjct: 26 LSGENKPRILLMGLRRSGKSSIQRVVFHKMSPHETLFLEGTNTLDIKYIANNSFVQFQIWDFPGDFEFKDDLVYG-------------------------GQLVNEEMIFGNCGAIVFVIDAQDEPYSDALSRLHDTVTRAHRYNPNIFFEVFIHKVDGDLFVSDDHKIDCQREIQQQVLDEINDGELD-IHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILISSCNMEKSFLFDVVSKVYIATDSNPVDMQSYELCSDMIDVVIDVSCIYG 279
BLAST of EWM21416.1 vs. NCBI_GenBank
Match: gi|813150453|ref|XP_012200873.1| (hypothetical protein SPRG_06671 [Saprolegnia parasitica CBS 223.65] >gi|641534486|gb|KDO28433.1| hypothetical protein SPRG_06671 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 335.495 bits (859), Expect = 2.653e-111 Identity = 166/280 (59.29%), Postives = 204/280 (72.86%), Query Frame = 0 Query: 8 LTDLTKPRILLMGPRRSGKTSILRVVFQKMPPHETLFLESTHAVDIRLANNNPFLQFQIWDFPGDFFFYRVSRNGGEGGGGGRELGGSMTQEGEGEGPKEGELLDEVGVFGVPAALVFVLDAQDEPYHEALTRLVDLVARGQSVNPSLHVVVFIHKVDGDLFLSDEHKVDCQRDVQHRIAQELRDASLEHVEVSCFLTSIYDHSIFEAFSKIVQRLTHQLPVMENLLNYLISACKMEKSFLFDVVSRLYLATDSNPVDMQTYEMCVDMIDVVVDVSCIYG 287 L+ KPRILLMG RRSGK+SI RVVF KM PHETLFLE T+ +DI+ NN F+QFQIWDFPGDF F G G+L++E +FG A+VFV+DAQDEPY +AL+RL D V R NP++ VFIHKVDGDLF+SD+HK+DCQR++Q ++ E+ D L+ + +S +LTSIYDHSIFEAFSK+VQ+L QLP +ENLLN LIS+C MEKSFLFDVVS++Y+ATDSNPVDMQ+YE+C DMIDVV+DVSCIYG Sbjct: 26 LSGENKPRILLMGLRRSGKSSIQRVVFHKMSPHETLFLEGTNTLDIKYIANNSFVQFQIWDFPGDFEFKDDLVYG-------------------------GQLVNEEMIFGNCGAIVFVIDAQDEPYSDALSRLHDTVTRAHHYNPNIFFEVFIHKVDGDLFVSDDHKIDCQREIQQQVLDEINDGELD-IHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILISSCNMEKSFLFDVVSKVYIATDSNPVDMQSYELCSDMIDVVIDVSCIYG 279 The following BLAST results are available for this feature:
BLAST of EWM21416.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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