EWM21413.1, cds9242 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21413.1 vs. NCBI_GenBank
Match: gi|585101641|gb|EWM21413.1| (ring finger protein 10, partial [Nannochloropsis gaditana]) HSP 1 Score: 384.03 bits (985), Expect = 1.165e-134 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0 Query: 1 HPFACRLSPPPYPVSAWSFLPSCPPPPRALRRGLPHGLGACGPRPPPFPHPHLPPCPICFDHPRAAQITRCGHHYCAPCVLRYLEEEGCVRRCPMCLEHIHQSDLRPLEAWSPSLPASSPPLSASPSPPSSSAESEEAREEEAGREERVKFLLLARTKGSLTPRVVEGGGGGGGGENRVRGRSSSVGSEEEGGWPPRTG 199 HPFACRLSPPPYPVSAWSFLPSCPPPPRALRRGLPHGLGACGPRPPPFPHPHLPPCPICFDHPRAAQITRCGHHYCAPCVLRYLEEEGCVRRCPMCLEHIHQSDLRPLEAWSPSLPASSPPLSASPSPPSSSAESEEAREEEAGREERVKFLLLARTKGSLTPRVVEGGGGGGGGENRVRGRSSSVGSEEEGGWPPRTG Sbjct: 1 HPFACRLSPPPYPVSAWSFLPSCPPPPRALRRGLPHGLGACGPRPPPFPHPHLPPCPICFDHPRAAQITRCGHHYCAPCVLRYLEEEGCVRRCPMCLEHIHQSDLRPLEAWSPSLPASSPPLSASPSPPSSSAESEEAREEEAGREERVKFLLLARTKGSLTPRVVEGGGGGGGGENRVRGRSSSVGSEEEGGWPPRTG 199
BLAST of EWM21413.1 vs. NCBI_GenBank
Match: gi|983144580|gb|KWU42574.1| (hypothetical protein RHOSPDRAFT_21023, partial [Rhodotorula sp. JG-1b]) HSP 1 Score: 79.7221 bits (195), Expect = 6.535e-14 Identity = 44/107 (41.12%), Postives = 63/107 (58.88%), Query Frame = 0 Query: 53 LPPCPICFDHPRAAQITRCGHHYCAPCVLRYL---EEEGCVRRCPMCLEHIHQSDLRPLEAWSPSLPASSPPLSASPSPPSSSAESEEAREEEAGREERVKFLLLAR 156 +P CPIC P A ++T+CGH YC PC+L YL E R+CP+C + +H DL+ ++ + P LPA+ P A+ SPP +S E +A A ER+K L+ R Sbjct: 100 VPACPICLSEPVAPRMTKCGHVYCYPCILHYLALAESGNKTRQCPICHDSVHSKDLKSVKWFFPDLPAAVP---AATSPP-ASVEPVDADLARALDRERLKMRLIRR 202
BLAST of EWM21413.1 vs. NCBI_GenBank
Match: gi|675864266|ref|XP_009017693.1| (hypothetical protein HELRODRAFT_191771 [Helobdella robusta] >gi|555701191|gb|ESO04424.1| hypothetical protein HELRODRAFT_191771 [Helobdella robusta]) HSP 1 Score: 75.8702 bits (185), Expect = 1.215e-12 Identity = 29/58 (50.00%), Postives = 42/58 (72.41%), Query Frame = 0 Query: 54 PPCPICFDHPRAAQITRCGHHYCAPCVLRYLE-EEGCVRRCPMCLEHIHQSDLRPLEA 110 P CPIC P+AA+ITRCGH YC PC+L YL ++ R+CP+C + +H +DL+ ++A Sbjct: 94 PYCPICLYPPKAAKITRCGHIYCWPCILHYLSLDDKSWRKCPICSDAVHSNDLKSVQA 151
BLAST of EWM21413.1 vs. NCBI_GenBank
Match: gi|498970249|ref|XP_004526763.1| (RING finger protein 10 [Ceratitis capitata]) HSP 1 Score: 72.4034 bits (176), Expect = 1.918e-11 Identity = 40/109 (36.70%), Postives = 53/109 (48.62%), Query Frame = 0 Query: 54 PPCPICFDHPRAAQITRCGHHYCAPCVLRYLE-EEGCVRRCPMCLEHIHQSDLRPLEAWSPSLPASSPPLSASPSPPSSSAESEEAREEEAGREERVKFLLLARTKGSL 161 P CPIC P AA++TRCGH YC PC+L YL + R+CP+C E IH +DL+ S E+ R+ G E + F L+ R KGS+ Sbjct: 245 PQCPICLYPPIAAKLTRCGHAYCWPCILHYLALSDKTWRKCPICYEAIHTADLK-------------------------STTIEQQRQFHIGDE--ITFHLMCRKKGSM 326
BLAST of EWM21413.1 vs. NCBI_GenBank
Match: gi|906475291|gb|KNC34676.1| (hypothetical protein FF38_09149 [Lucilia cuprina]) HSP 1 Score: 72.4034 bits (176), Expect = 1.920e-11 Identity = 41/112 (36.61%), Postives = 54/112 (48.21%), Query Frame = 0 Query: 51 PHLPPCPICFDHPRAAQITRCGHHYCAPCVLRYLE-EEGCVRRCPMCLEHIHQSDLRPLEAWSPSLPASSPPLSASPSPPSSSAESEEAREEEAGREERVKFLLLARTKGSL 161 P P CPIC P AA++TRCGH YC PCVL YL + R+CP+C + IH DL+ S+S ++A + R+ F L+ R KGSL Sbjct: 242 PDEPQCPICLYPPVAAKVTRCGHVYCWPCVLHYLSLSDKTWRKCPICYDAIHVGDLK-----------------------SASIVQQQAFNANS----RITFRLMRRKKGSL 326
BLAST of EWM21413.1 vs. NCBI_GenBank
Match: gi|907613982|ref|XP_013118715.1| (PREDICTED: RING finger protein 10 [Stomoxys calcitrans]) HSP 1 Score: 71.2478 bits (173), Expect = 5.084e-11 Identity = 29/57 (50.88%), Postives = 37/57 (64.91%), Query Frame = 0 Query: 51 PHLPPCPICFDHPRAAQITRCGHHYCAPCVLRYLE-EEGCVRRCPMCLEHIHQSDLR 106 P P CPIC P AA++TRCGH YC PCVL YL + R+CP+C + +H DL+ Sbjct: 233 PEEPQCPICLYPPSAAKVTRCGHVYCWPCVLHYLSLSDKSWRKCPICYDAVHVGDLK 289
BLAST of EWM21413.1 vs. NCBI_GenBank
Match: gi|751805056|ref|XP_011212742.1| (PREDICTED: RING finger protein 10 [Bactrocera dorsalis]) HSP 1 Score: 71.2478 bits (173), Expect = 6.006e-11 Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 0 Query: 54 PPCPICFDHPRAAQITRCGHHYCAPCVLRYLE-EEGCVRRCPMCLEHIHQSDLR 106 P CPIC P AA++TRCGH YC PC+L YL + R+CP+C E IH +DL+ Sbjct: 243 PQCPICLYPPIAAKLTRCGHAYCWPCILHYLALSDKTWRKCPICYEAIHTTDLK 296
BLAST of EWM21413.1 vs. NCBI_GenBank
Match: gi|762166885|ref|XP_011421757.1| (PREDICTED: RING finger protein 10 [Crassostrea gigas]) HSP 1 Score: 70.8626 bits (172), Expect = 6.354e-11 Identity = 31/60 (51.67%), Postives = 41/60 (68.33%), Query Frame = 0 Query: 48 FPHPHLPPCPICFDHPRAAQITRCGHHYCAPCVLRYLEE-EGCVRRCPMCLEHIHQSDLR 106 F H + PCPIC + P AA++TRCGH YC PC+L YL E R+CP+C E +H+ DL+ Sbjct: 200 FGH-EVTPCPICLEQPIAAKMTRCGHIYCWPCILHYLALGEQTWRKCPICYEAVHEKDLK 258
BLAST of EWM21413.1 vs. NCBI_GenBank
Match: gi|1098650111|ref|XP_018789989.1| (PREDICTED: RING finger protein 10 [Bactrocera latifrons]) HSP 1 Score: 70.8626 bits (172), Expect = 6.527e-11 Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 0 Query: 54 PPCPICFDHPRAAQITRCGHHYCAPCVLRYLE-EEGCVRRCPMCLEHIHQSDLR 106 P CPIC P AA++TRCGH YC PC+L YL + R+CP+C E IH +DL+ Sbjct: 243 PQCPICLYPPIAAKLTRCGHAYCWPCILHYLALSDKTWRKCPICYEAIHTADLK 296
BLAST of EWM21413.1 vs. NCBI_GenBank
Match: gi|929358679|ref|XP_014088648.1| (PREDICTED: RING finger protein 10 [Bactrocera oleae]) HSP 1 Score: 70.8626 bits (172), Expect = 6.550e-11 Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 0 Query: 54 PPCPICFDHPRAAQITRCGHHYCAPCVLRYLE-EEGCVRRCPMCLEHIHQSDLR 106 P CPIC P AA++TRCGH YC PC+L YL + R+CP+C E IH +DL+ Sbjct: 243 PQCPICLYPPIAAKLTRCGHAYCWPCILHYLALSDKTWRKCPICYEAIHTADLK 296 The following BLAST results are available for this feature:
BLAST of EWM21413.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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