EWM21432.1, cds9241 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21432.1 vs. NCBI_GenBank
Match: gi|585101661|gb|EWM21432.1| (START-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 633.639 bits (1633), Expect = 0.000e+0 Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0 Query: 1 MKYTSNTHLSKKERTEKCTSLFFFLADRLVCQAPRQRGRRTRHSETSSSTIDVLFALLRFNFSTDLRLTIFNRPRFPLLAPESATARMPPSQAHPSRETSFSPPTLLLQLLLLFPSLLPITAFLTSPLYKSYSFPPIPSVGASPISYTRQPSRLILSSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYRQVLMKEIREKRIEASGGLDE 314 MKYTSNTHLSKKERTEKCTSLFFFLADRLVCQAPRQRGRRTRHSETSSSTIDVLFALLRFNFSTDLRLTIFNRPRFPLLAPESATARMPPSQAHPSRETSFSPPTLLLQLLLLFPSLLPITAFLTSPLYKSYSFPPIPSVGASPISYTRQPSRLILSSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYRQVLMKEIREKRIEASGGLDE Sbjct: 1 MKYTSNTHLSKKERTEKCTSLFFFLADRLVCQAPRQRGRRTRHSETSSSTIDVLFALLRFNFSTDLRLTIFNRPRFPLLAPESATARMPPSQAHPSRETSFSPPTLLLQLLLLFPSLLPITAFLTSPLYKSYSFPPIPSVGASPISYTRQPSRLILSSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYRQVLMKEIREKRIEASGGLDE 314
BLAST of EWM21432.1 vs. NCBI_GenBank
Match: gi|553194557|ref|XP_005855987.1| (cyclase dehydrase, partial [Nannochloropsis gaditana CCMP526] >gi|422293071|gb|EKU20372.1| cyclase dehydrase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 488.419 bits (1256), Expect = 2.969e-173 Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0 Query: 72 NRPRFPLLAPESATARMPPSQAHPSRETSFSPPTLLLQLLLLFPSLLPITAFLTSPLYKSYSFPPIPSVGASPISYTRQPSRLILSSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYRQVLMKEIREKRIEASGGLDE 314 NRPRFPLLAPESATARMPPSQAHPSRETSFSPPTLLLQLLLLFPSLLPITAFLTSPLYKSYSFPPIPSVGASPISYTRQPSRLILSSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYRQVLMKEIREKRIEASGGLDE Sbjct: 1 NRPRFPLLAPESATARMPPSQAHPSRETSFSPPTLLLQLLLLFPSLLPITAFLTSPLYKSYSFPPIPSVGASPISYTRQPSRLILSSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYRQVLMKEIREKRIEASGGLDE 243
BLAST of EWM21432.1 vs. NCBI_GenBank
Match: gi|299117021|emb|CBN73792.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 119.398 bits (298), Expect = 2.427e-29 Identity = 59/149 (39.60%), Postives = 89/149 (59.73%), Query Frame = 0 Query: 120 ITAFLTSPLYKSYSFPPIPSVG--ASPISYTRQPSRLILSSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVP 266 I AF +S + + + + S I R + ++W+D +V +EVPA+ + Y+LYS L+ P WSPWL+SVQ D+ S+W ++S G V+W AQNT+E G ++WES TGL NRG VTF+++ M LT+SY++P Sbjct: 16 INAFCSSGVIRCDALVLRGGIKRRDSTIRRVRGGVSDLRAAWIDEQVSLEVPASTQDAYSLYSDLQRQPEWSPWLKSVQH-DRATGTSKWVIQSNGIKVSWNAQNTVEVYGSEVAWESTTGLSNRGRVTFDDKGGERCLMTLTLSYNLP 163
BLAST of EWM21432.1 vs. NCBI_GenBank
Match: gi|504978354|ref|WP_015165456.1| (cyclase/dehydrase [Pseudanabaena sp. PCC 7367] >gi|427990243|gb|AFY70498.1| cyclase/dehydrase [Pseudanabaena sp. PCC 7367]) HSP 1 Score: 117.857 bits (294), Expect = 4.703e-29 Identity = 57/140 (40.71%), Postives = 88/140 (62.86%), Query Frame = 0 Query: 156 LSSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYRQ 295 ++ W++ V+IEV E +AL+S LE+ P+W W+ V+ + +SEW L S GF WKA T + P + I WES +GLPNRG V F +R+ G T + LT++Y++P + ++ D + R +ESTLQ+DL R++Q Sbjct: 1 MADWLEHTVQIEVNYPIEKVWALWSDLEKMPKWMKWIEGVRINAENPELSEWVLGSSGFNFTWKANITKQVPNQIIQWESVSGLPNRGAVRFYDRKVG-TVVKLTVAYAIPGIVGQVMDDLFLGRVVESTLQADLERFKQ 139
BLAST of EWM21432.1 vs. NCBI_GenBank
Match: gi|515895807|ref|WP_017326390.1| (hypothetical protein [Synechococcus sp. PCC 7336]) HSP 1 Score: 115.161 bits (287), Expect = 4.603e-28 Identity = 57/136 (41.91%), Postives = 86/136 (63.24%), Query Frame = 0 Query: 159 WVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYR 294 W++ +I+VPA+ + ++L+S LE+ PRW W+ SVQ LD +S WTL SRGFT W ++ +RI WES GL NRG + F +R+ T + L+I+YSVP +A + + + R +ESTLQ+DL R++ Sbjct: 5 WLEHTCQIQVPASIDRVWSLWSNLEQLPRWMKWISSVQTLDG--DLSRWTLSSRGFTFNWTSKTHTVIHQQRIEWESVDGLHNRGCLRFYDRKADGTIVRLSIAYSVPGWLAAILQIPFIDRIVESTLQADLERFK 138
BLAST of EWM21432.1 vs. NCBI_GenBank
Match: gi|545701424|ref|XP_005703046.1| (cyclase/dehydrase [Galdieria sulphuraria] >gi|452819468|gb|EME26526.1| cyclase/dehydrase [Galdieria sulphuraria]) HSP 1 Score: 115.161 bits (287), Expect = 3.564e-27 Identity = 58/142 (40.85%), Postives = 84/142 (59.15%), Query Frame = 0 Query: 159 WVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYRQVLMKE 300 W+ V+++V + LYS LE+ P WSPWLRSVQ K I+ W L +RG +V+W+++NT E I+WES GLPNRG V F+E+ T + LT+ Y VP+ + L V +++E TL DL R+R ++E Sbjct: 58 WLGHTVKLDVQVPSWLAFDLYSDLEKMPSWSPWLRSVQVDPKQPEIATWNLSARGLSVSWRSRNTRVERPHIIAWESLEGLPNRGSVQFQEKGDNCTQVELTVEYKVPRFLKVLLSNSFVGKFVERTLLEDLKRFRLCALRE 199
BLAST of EWM21432.1 vs. NCBI_GenBank
Match: gi|515856562|ref|WP_017287190.1| (hypothetical protein [Leptolyngbya boryana] >gi|932878112|dbj|BAS58164.1| cyclase/dehydrase [Leptolyngbya boryana IAM M-101] >gi|932884752|dbj|BAS64512.1| cyclase/dehydrase [Leptolyngbya boryana dg5] >gi|1210136521|dbj|BAY55626.1| hypothetical protein NIES2135_24500 [Leptolyngbya boryana NIES-2135]) HSP 1 Score: 112.849 bits (281), Expect = 4.101e-27 Identity = 54/144 (37.50%), Postives = 90/144 (62.50%), Query Frame = 0 Query: 156 LSSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYRQVLMK 299 +S W++ V++EV + + L++ +E+ P W W+ SVQ L+ +S WTL + G +WK++ T + P + I WES GLPNRG + F +R T + +TISY+VP+ +A++ + V R++EST+Q+DL R+R M+ Sbjct: 1 MSEWLEHTVQVEVEQPIDRVWQLWADVEQLPNWMNWITSVQVLENQPELSRWTLSTAGLQFSWKSKITKQIPNQIIQWESIDGLPNRGAIRFYDRATS-TIVKMTISYAVPELLARVMNTPFVGRFVESTIQADLDRFRDYAMR 143
BLAST of EWM21432.1 vs. NCBI_GenBank
Match: gi|763349676|ref|WP_044207922.1| (membrane protein [Coleofasciculus chthonoplastes]) HSP 1 Score: 112.464 bits (280), Expect = 6.538e-27 Identity = 57/143 (39.86%), Postives = 85/143 (59.44%), Query Frame = 0 Query: 157 SSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYRQVLMK 299 S W++ V++EV E ++L+S LE+ PRW W+ SVQ L+ +S W L S GF +W ++ P + I WES GLPNRG V F +R G + + LT++Y +P + KL D + R +EST+Q+DL R+R +K Sbjct: 5 SDWLEHSVQVEVEVPMETVWSLWSDLEQMPRWMKWIDSVQVLEDNPDLSRWKLASSGFEFSWISRILKLVPHQIIQWESVDGLPNRGAVRFYDRH-GSSVVKLTVAYDIPGILGKLMDGLFLGRIVESTIQADLDRFRDYALK 146
BLAST of EWM21432.1 vs. NCBI_GenBank
Match: gi|518327838|ref|WP_019498045.1| (membrane protein [Pseudanabaena sp. PCC 6802]) HSP 1 Score: 111.309 bits (277), Expect = 1.439e-26 Identity = 53/139 (38.13%), Postives = 85/139 (61.15%), Query Frame = 0 Query: 156 LSSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYR 294 +S W++ V++EV E ++++S LE+ PRW W+ SV+ L IS W L S GFT W+++ + P + + WES GLPNRG + F +R T + LT++Y++P I ++ D + R +ESTL++DL R+R Sbjct: 1 MSDWLEHTVQVEVDRPVERVWSMWSDLEKMPRWMKWIESVKILPDRPDISNWELGSNGFTFTWRSRILKQIPNQIVQWESIDGLPNRGAIRFYDRHHHSTIVKLTVAYAIPGIIGQVMDNLFLGRMVESTLKADLERFR 139
BLAST of EWM21432.1 vs. NCBI_GenBank
Match: gi|738033539|ref|WP_035992447.1| (membrane protein [Leptolyngbya sp. KIOST-1]) HSP 1 Score: 110.538 bits (275), Expect = 3.245e-26 Identity = 57/143 (39.86%), Postives = 83/143 (58.04%), Query Frame = 0 Query: 156 LSSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYRQVLM 298 + W+D V ++V E + L+S LE+ PRW W+ SV+ + ISEW L SRG W+++ T + I WE+ GLPNRG + F +R+ G +++ LT+SYSVP I K D + R +E+TLQ DL R+R M Sbjct: 1 MGEWLDHSVLVDVDVPVETSWDLWSDLEQMPRWMKWIDSVRISEADPDISEWKLASRGLEFTWRSKITNLVTHQIIQWEAIDGLPNRGAIRFYDRKEGQSTVKLTVSYSVPAVI-KWMDGLFLGRLVEATLQDDLNRFRDYAM 142 The following BLAST results are available for this feature:
BLAST of EWM21432.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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