EWM21432.1, cds9241 (CDS) Nannochloropsis gaditana

Overview
NameEWM21432.1
Unique Namecds9241
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:254837..255781 -

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Properties
Property NameValue
Protein idEWM21432.1
ProductSTART-like domain protein
Orig transcript idgnl|cribi|Naga_100307g1.2277.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:254837..255781 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom
IPR005031Polyket_cyc
Homology
BLAST of EWM21432.1 vs. NCBI_GenBank
Match: gi|585101661|gb|EWM21432.1| (START-like domain protein [Nannochloropsis gaditana])

HSP 1 Score: 633.639 bits (1633), Expect = 0.000e+0
Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0
Query:    1 MKYTSNTHLSKKERTEKCTSLFFFLADRLVCQAPRQRGRRTRHSETSSSTIDVLFALLRFNFSTDLRLTIFNRPRFPLLAPESATARMPPSQAHPSRETSFSPPTLLLQLLLLFPSLLPITAFLTSPLYKSYSFPPIPSVGASPISYTRQPSRLILSSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYRQVLMKEIREKRIEASGGLDE 314
            MKYTSNTHLSKKERTEKCTSLFFFLADRLVCQAPRQRGRRTRHSETSSSTIDVLFALLRFNFSTDLRLTIFNRPRFPLLAPESATARMPPSQAHPSRETSFSPPTLLLQLLLLFPSLLPITAFLTSPLYKSYSFPPIPSVGASPISYTRQPSRLILSSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYRQVLMKEIREKRIEASGGLDE
Sbjct:    1 MKYTSNTHLSKKERTEKCTSLFFFLADRLVCQAPRQRGRRTRHSETSSSTIDVLFALLRFNFSTDLRLTIFNRPRFPLLAPESATARMPPSQAHPSRETSFSPPTLLLQLLLLFPSLLPITAFLTSPLYKSYSFPPIPSVGASPISYTRQPSRLILSSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYRQVLMKEIREKRIEASGGLDE 314          
BLAST of EWM21432.1 vs. NCBI_GenBank
Match: gi|553194557|ref|XP_005855987.1| (cyclase dehydrase, partial [Nannochloropsis gaditana CCMP526] >gi|422293071|gb|EKU20372.1| cyclase dehydrase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 488.419 bits (1256), Expect = 2.969e-173
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0
Query:   72 NRPRFPLLAPESATARMPPSQAHPSRETSFSPPTLLLQLLLLFPSLLPITAFLTSPLYKSYSFPPIPSVGASPISYTRQPSRLILSSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYRQVLMKEIREKRIEASGGLDE 314
            NRPRFPLLAPESATARMPPSQAHPSRETSFSPPTLLLQLLLLFPSLLPITAFLTSPLYKSYSFPPIPSVGASPISYTRQPSRLILSSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYRQVLMKEIREKRIEASGGLDE
Sbjct:    1 NRPRFPLLAPESATARMPPSQAHPSRETSFSPPTLLLQLLLLFPSLLPITAFLTSPLYKSYSFPPIPSVGASPISYTRQPSRLILSSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYRQVLMKEIREKRIEASGGLDE 243          
BLAST of EWM21432.1 vs. NCBI_GenBank
Match: gi|299117021|emb|CBN73792.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 119.398 bits (298), Expect = 2.427e-29
Identity = 59/149 (39.60%), Postives = 89/149 (59.73%), Query Frame = 0
Query:  120 ITAFLTSPLYKSYSFPPIPSVG--ASPISYTRQPSRLILSSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVP 266
            I AF +S + +  +      +    S I   R     + ++W+D +V +EVPA+ +  Y+LYS L+  P WSPWL+SVQ  D+    S+W ++S G  V+W AQNT+E  G  ++WES TGL NRG VTF+++      M LT+SY++P
Sbjct:   16 INAFCSSGVIRCDALVLRGGIKRRDSTIRRVRGGVSDLRAAWIDEQVSLEVPASTQDAYSLYSDLQRQPEWSPWLKSVQH-DRATGTSKWVIQSNGIKVSWNAQNTVEVYGSEVAWESTTGLSNRGRVTFDDKGGERCLMTLTLSYNLP 163          
BLAST of EWM21432.1 vs. NCBI_GenBank
Match: gi|504978354|ref|WP_015165456.1| (cyclase/dehydrase [Pseudanabaena sp. PCC 7367] >gi|427990243|gb|AFY70498.1| cyclase/dehydrase [Pseudanabaena sp. PCC 7367])

HSP 1 Score: 117.857 bits (294), Expect = 4.703e-29
Identity = 57/140 (40.71%), Postives = 88/140 (62.86%), Query Frame = 0
Query:  156 LSSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYRQ 295
            ++ W++  V+IEV    E  +AL+S LE+ P+W  W+  V+   +   +SEW L S GF   WKA  T + P + I WES +GLPNRG V F +R+ G T + LT++Y++P  + ++ D   + R +ESTLQ+DL R++Q
Sbjct:    1 MADWLEHTVQIEVNYPIEKVWALWSDLEKMPKWMKWIEGVRINAENPELSEWVLGSSGFNFTWKANITKQVPNQIIQWESVSGLPNRGAVRFYDRKVG-TVVKLTVAYAIPGIVGQVMDDLFLGRVVESTLQADLERFKQ 139          
BLAST of EWM21432.1 vs. NCBI_GenBank
Match: gi|515895807|ref|WP_017326390.1| (hypothetical protein [Synechococcus sp. PCC 7336])

HSP 1 Score: 115.161 bits (287), Expect = 4.603e-28
Identity = 57/136 (41.91%), Postives = 86/136 (63.24%), Query Frame = 0
Query:  159 WVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYR 294
            W++   +I+VPA+ +  ++L+S LE+ PRW  W+ SVQ LD    +S WTL SRGFT  W ++       +RI WES  GL NRG + F +R+   T + L+I+YSVP  +A +  +  + R +ESTLQ+DL R++
Sbjct:    5 WLEHTCQIQVPASIDRVWSLWSNLEQLPRWMKWISSVQTLDG--DLSRWTLSSRGFTFNWTSKTHTVIHQQRIEWESVDGLHNRGCLRFYDRKADGTIVRLSIAYSVPGWLAAILQIPFIDRIVESTLQADLERFK 138          
BLAST of EWM21432.1 vs. NCBI_GenBank
Match: gi|545701424|ref|XP_005703046.1| (cyclase/dehydrase [Galdieria sulphuraria] >gi|452819468|gb|EME26526.1| cyclase/dehydrase [Galdieria sulphuraria])

HSP 1 Score: 115.161 bits (287), Expect = 3.564e-27
Identity = 58/142 (40.85%), Postives = 84/142 (59.15%), Query Frame = 0
Query:  159 WVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYRQVLMKE 300
            W+   V+++V       + LYS LE+ P WSPWLRSVQ   K   I+ W L +RG +V+W+++NT  E    I+WES  GLPNRG V F+E+    T + LT+ Y VP+ +  L     V +++E TL  DL R+R   ++E
Sbjct:   58 WLGHTVKLDVQVPSWLAFDLYSDLEKMPSWSPWLRSVQVDPKQPEIATWNLSARGLSVSWRSRNTRVERPHIIAWESLEGLPNRGSVQFQEKGDNCTQVELTVEYKVPRFLKVLLSNSFVGKFVERTLLEDLKRFRLCALRE 199          
BLAST of EWM21432.1 vs. NCBI_GenBank
Match: gi|515856562|ref|WP_017287190.1| (hypothetical protein [Leptolyngbya boryana] >gi|932878112|dbj|BAS58164.1| cyclase/dehydrase [Leptolyngbya boryana IAM M-101] >gi|932884752|dbj|BAS64512.1| cyclase/dehydrase [Leptolyngbya boryana dg5] >gi|1210136521|dbj|BAY55626.1| hypothetical protein NIES2135_24500 [Leptolyngbya boryana NIES-2135])

HSP 1 Score: 112.849 bits (281), Expect = 4.101e-27
Identity = 54/144 (37.50%), Postives = 90/144 (62.50%), Query Frame = 0
Query:  156 LSSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYRQVLMK 299
            +S W++  V++EV    +  + L++ +E+ P W  W+ SVQ L+    +S WTL + G   +WK++ T + P + I WES  GLPNRG + F +R    T + +TISY+VP+ +A++ +   V R++EST+Q+DL R+R   M+
Sbjct:    1 MSEWLEHTVQVEVEQPIDRVWQLWADVEQLPNWMNWITSVQVLENQPELSRWTLSTAGLQFSWKSKITKQIPNQIIQWESIDGLPNRGAIRFYDRATS-TIVKMTISYAVPELLARVMNTPFVGRFVESTIQADLDRFRDYAMR 143          
BLAST of EWM21432.1 vs. NCBI_GenBank
Match: gi|763349676|ref|WP_044207922.1| (membrane protein [Coleofasciculus chthonoplastes])

HSP 1 Score: 112.464 bits (280), Expect = 6.538e-27
Identity = 57/143 (39.86%), Postives = 85/143 (59.44%), Query Frame = 0
Query:  157 SSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYRQVLMK 299
            S W++  V++EV    E  ++L+S LE+ PRW  W+ SVQ L+    +S W L S GF  +W ++     P + I WES  GLPNRG V F +R  G + + LT++Y +P  + KL D   + R +EST+Q+DL R+R   +K
Sbjct:    5 SDWLEHSVQVEVEVPMETVWSLWSDLEQMPRWMKWIDSVQVLEDNPDLSRWKLASSGFEFSWISRILKLVPHQIIQWESVDGLPNRGAVRFYDRH-GSSVVKLTVAYDIPGILGKLMDGLFLGRIVESTIQADLDRFRDYALK 146          
BLAST of EWM21432.1 vs. NCBI_GenBank
Match: gi|518327838|ref|WP_019498045.1| (membrane protein [Pseudanabaena sp. PCC 6802])

HSP 1 Score: 111.309 bits (277), Expect = 1.439e-26
Identity = 53/139 (38.13%), Postives = 85/139 (61.15%), Query Frame = 0
Query:  156 LSSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYR 294
            +S W++  V++EV    E  ++++S LE+ PRW  W+ SV+ L     IS W L S GFT  W+++   + P + + WES  GLPNRG + F +R    T + LT++Y++P  I ++ D   + R +ESTL++DL R+R
Sbjct:    1 MSDWLEHTVQVEVDRPVERVWSMWSDLEKMPRWMKWIESVKILPDRPDISNWELGSNGFTFTWRSRILKQIPNQIVQWESIDGLPNRGAIRFYDRHHHSTIVKLTVAYAIPGIIGQVMDNLFLGRMVESTLKADLERFR 139          
BLAST of EWM21432.1 vs. NCBI_GenBank
Match: gi|738033539|ref|WP_035992447.1| (membrane protein [Leptolyngbya sp. KIOST-1])

HSP 1 Score: 110.538 bits (275), Expect = 3.245e-26
Identity = 57/143 (39.86%), Postives = 83/143 (58.04%), Query Frame = 0
Query:  156 LSSWVDTKVEIEVPATPEACYALYSQLEEHPRWSPWLRSVQFLDKVERISEWTLESRGFTVAWKAQNTIEEPGRRISWESRTGLPNRGLVTFEERRPGMTSMALTISYSVPKPIAKLGDVGLVKRYIESTLQSDLTRYRQVLM 298
            +  W+D  V ++V    E  + L+S LE+ PRW  W+ SV+  +    ISEW L SRG    W+++ T     + I WE+  GLPNRG + F +R+ G +++ LT+SYSVP  I K  D   + R +E+TLQ DL R+R   M
Sbjct:    1 MGEWLDHSVLVDVDVPVETSWDLWSDLEQMPRWMKWIDSVRISEADPDISEWKLASRGLEFTWRSKITNLVTHQIIQWEAIDGLPNRGAIRFYDRKEGQSTVKLTVSYSVPAVI-KWMDGLFLGRLVEATLQDDLNRFRDYAM 142          
The following BLAST results are available for this feature:
BLAST of EWM21432.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101661|gb|EWM21432.1|0.000e+0100.00START-like domain protein [Nannochloropsis gaditan... [more]
gi|553194557|ref|XP_005855987.1|2.969e-173100.00cyclase dehydrase, partial [Nannochloropsis gadita... [more]
gi|299117021|emb|CBN73792.1|2.427e-2939.60conserved unknown protein [Ectocarpus siliculosus][more]
gi|504978354|ref|WP_015165456.1|4.703e-2940.71cyclase/dehydrase [Pseudanabaena sp. PCC 7367] >gi... [more]
gi|515895807|ref|WP_017326390.1|4.603e-2841.91hypothetical protein [Synechococcus sp. PCC 7336][more]
gi|545701424|ref|XP_005703046.1|3.564e-2740.85cyclase/dehydrase [Galdieria sulphuraria] >gi|4528... [more]
gi|515856562|ref|WP_017287190.1|4.101e-2737.50hypothetical protein [Leptolyngbya boryana] >gi|93... [more]
gi|763349676|ref|WP_044207922.1|6.538e-2739.86membrane protein [Coleofasciculus chthonoplastes][more]
gi|518327838|ref|WP_019498045.1|1.439e-2638.13membrane protein [Pseudanabaena sp. PCC 6802][more]
gi|738033539|ref|WP_035992447.1|3.245e-2639.86membrane protein [Leptolyngbya sp. KIOST-1][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9271rna9271Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications