EWM29743.1, cds922 (CDS) Nannochloropsis gaditana

Overview
NameEWM29743.1
Unique Namecds922
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:735864..735899 -
Alignment locationCM002456.1:735648..735753 -
Alignment locationCM002456.1:735353..735606 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29743.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100022g35.842.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:735864..735899 -
CM002456.1supercontigCM002456.1:735648..735753 -
CM002456.1supercontigCM002456.1:735353..735606 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM29743.1 vs. NCBI_GenBank
Match: gi|585112323|gb|EWM29743.1| (hypothetical protein Naga_100022g35 [Nannochloropsis gaditana])

HSP 1 Score: 271.937 bits (694), Expect = 1.867e-92
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 
Query:    1 MQCLTPSKPCSRDFEAIKRGGKLLGATQVSNHVCDRPTAQIFWGGQPPMLVTPRYFLELYASSIWLKIPGGKSKVKEIRRPPGCSTKETVHPSGQVITKRFMPTLSRQMGQVLRHSPYGRWRELCTPESLH 131
            MQCLTPSKPCSRDFEAIKRGGKLLGATQVSNHVCDRPTAQIFWGGQPPMLVTPRYFLELYASSIWLKIPGGKSKVKEIRRPPGCSTKETVHPSGQVITKRFMPTLSRQMGQVLRHSPYGRWRELCTPESLH
Sbjct:    1 MQCLTPSKPCSRDFEAIKRGGKLLGATQVSNHVCDRPTAQIFWGGQPPMLVTPRYFLELYASSIWLKIPGGKSKVKEIRRPPGCSTKETVHPSGQVITKRFMPTLSRQMGQVLRHSPYGRWRELCTPESLH 131
The following BLAST results are available for this feature:
BLAST of EWM29743.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112323|gb|EWM29743.1|1.867e-92100.00hypothetical protein Naga_100022g35 [Nannochlorops... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna922rna922Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications