EWM21511.1, cds9217 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21511.1 vs. NCBI_GenBank
Match: gi|553181777|ref|XP_005853623.1| (hypothetical protein NGA_0430001 [Nannochloropsis gaditana CCMP526] >gi|422295435|gb|EKU22734.1| hypothetical protein NGA_0430001 [Nannochloropsis gaditana CCMP526] >gi|585101741|gb|EWM21511.1| Mitochondrial glycoprotein [Nannochloropsis gaditana]) HSP 1 Score: 566.229 bits (1458), Expect = 0.000e+0 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0 Query: 1 MLRTSTLALLRRAASATPQQQHHMATSLVFRAGTNATMGFVRHPQAMSPILIVKSRRFGTHGDGDVMPSAMKGGSGGGHGTSAALEDLLARELQEEKDLMESEERAPELEDVSEKIHKRFHIKESPGSSIIKMHTKHNTEKIMVQYDVQDTTEDELDPQELEDEKAEDYTVGIRGVVTIAKAHHKLMFSVVFTNTVWVEKVALDSDGREWNDETLYWSDFSEYPEDVQEAFTRHLAARNIDDELAVFVSYFAFEKEKEHYLTFLERATEFVGAK 274 MLRTSTLALLRRAASATPQQQHHMATSLVFRAGTNATMGFVRHPQAMSPILIVKSRRFGTHGDGDVMPSAMKGGSGGGHGTSAALEDLLARELQEEKDLMESEERAPELEDVSEKIHKRFHIKESPGSSIIKMHTKHNTEKIMVQYDVQDTTEDELDPQELEDEKAEDYTVGIRGVVTIAKAHHKLMFSVVFTNTVWVEKVALDSDGREWNDETLYWSDFSEYPEDVQEAFTRHLAARNIDDELAVFVSYFAFEKEKEHYLTFLERATEFVGAK Sbjct: 1 MLRTSTLALLRRAASATPQQQHHMATSLVFRAGTNATMGFVRHPQAMSPILIVKSRRFGTHGDGDVMPSAMKGGSGGGHGTSAALEDLLARELQEEKDLMESEERAPELEDVSEKIHKRFHIKESPGSSIIKMHTKHNTEKIMVQYDVQDTTEDELDPQELEDEKAEDYTVGIRGVVTIAKAHHKLMFSVVFTNTVWVEKVALDSDGREWNDETLYWSDFSEYPEDVQEAFTRHLAARNIDDELAVFVSYFAFEKEKEHYLTFLERATEFVGAK 274
BLAST of EWM21511.1 vs. NCBI_GenBank
Match: gi|1214703189|gb|OWZ15248.1| (hypothetical protein PHMEG_00011142 [Phytophthora megakarya]) HSP 1 Score: 99.3673 bits (246), Expect = 2.159e-21 Identity = 67/198 (33.84%), Postives = 106/198 (53.54%), Query Frame = 0 Query: 88 LLARELQEEKDLMESEERAPELEDVSEKIHKRFHIKESPGSSIIKMHTKHNTEKIMVQYDVQDTTEDELDPQ-----------ELEDEKAEDYTVGIRGVVTIAKAHHKLMFSVVFTNTVWVEKVALDSD-GREWNDETLYWS-DFSEYPEDVQEAFTRHLAARNIDDELAVFVSYFAFEKEKEHYLTFLERATEFVG 272 +L RE++EEK E+ ELED+ ++ K F ++E+PG I + + I ++++ QDT E E + + ED++AED G+R + + + L F V ++ + VE+V D ++ DETLY+ +F + DVQ+ F +LA R IDDELA F++ FA KE+ YL FLE F+ Sbjct: 36 ILNREIKEEKANCFEEQ---ELEDLRTQVEKVFQLQEAPGCMEILLKGSVGDDSIQIKFNAQDTMELEDEAEYDDVDEEQDEEVYEDDEAEDELPGVRFTADVTRDNKGLQFDCVASSNLTVERVRYLHDFAKDAEDETLYFGPNFIDLELDVQDKFYNYLAERKIDDELAQFITQFADLKEQREYLAFLEDTETFIN 230
BLAST of EWM21511.1 vs. NCBI_GenBank
Match: gi|698778249|ref|XP_009822168.1| (hypothetical protein H257_00931 [Aphanomyces astaci] >gi|574121829|gb|ETV87305.1| hypothetical protein H257_00931 [Aphanomyces astaci]) HSP 1 Score: 97.8265 bits (242), Expect = 5.237e-21 Identity = 70/202 (34.65%), Postives = 108/202 (53.47%), Query Frame = 0 Query: 82 SAALEDLLARELQEEKDLMESEERAPELEDVSEKIHKRFHIKESPGSSIIKMHTKHNTEKIMVQYDVQDTTEDELDPQELEDEKA----------EDYTVGIRGVVTIAKAHHKLMFSVVFTNTVWVEKVALDSDGREWNDETLYWSDFSEYPEDVQEAFTRHLAARNIDDELAVFVSYFAFEKEKEHYLTFLERATEFVGA 273 S+AL LL REL EEK E ELE + EK+ F I+++PG+ I + +K+ E I V+++ QD + + E ++ + +D IR I K +H L+F V ++ + VE V + ND F++ EDVQEAF +L AR+I+D+LA F++ F+ KE++ Y+TFLE A +F A Sbjct: 23 SSALPSLLGRELAEEKANCFVGE---ELEALREKVLANFKIQDTPGNLDIVLLSKYKNEAIDVKFNCQDVADVAEEGGEYDEGEEDEAEDAGEFEDDVLPCIRFTARIVKDNHALVFDCVASSVLTVEGVMHTETADDLNDSDYEGPRFADLEEDVQEAFADYLNARHINDDLANFITQFSDLKEQKEYVTFLENAQKFTEA 221
BLAST of EWM21511.1 vs. NCBI_GenBank
Match: gi|1173954940|gb|OQS02052.1| (hypothetical protein THRCLA_05548 [Thraustotheca clavata]) HSP 1 Score: 93.2041 bits (230), Expect = 2.917e-19 Identity = 71/212 (33.49%), Postives = 113/212 (53.30%), Query Frame = 0 Query: 66 VMPSAMKGGSGGGHGTSAALEDLLARELQEEK-DLMESEERAPELEDVSEKIHKRFHIKESPGSSIIKMHTKHNTEKIMVQYDVQDTTEDE-----LDPQELEDEKAEDYTVGIRGVVTIAKAHHKLMFSVVFTNTVWVEKVA-LDSDGREWNDETLYWSDFSEYPEDVQEAFTRHLAARNIDDELAVFVSYFAFEKEKEHYLTFLERATEF 270 + A++ T AL LL+REL EEK + S+E LE + EK+ K F I ++PG+ I + +K+N E I V ++VQD E E D + D++ ED IR I K + L+F V ++ + ++ V L+ + E ++ + F + DVQEAF +L R+I+DELA F+ ++ KE++ Y+TFLE +F Sbjct: 6 IASRALRVPKARFFSTEDALSSLLSRELAEEKANCFVSDE----LETLREKVLKTFKIHDTPGNVAITLKSKYNDELIDVNFNVQDIAETEEAYEDEDGEGEYDDEEEDVLPNIRFTARIVKNNQALIFDCVASSILTIDSVMHLEENSDEVDNNVYHGPRFMDLENDVQEAFADYLNDRHINDELANFIMEYSDLKEQKEYVTFLENVQKF 213
BLAST of EWM21511.1 vs. NCBI_GenBank
Match: gi|953499636|emb|CEG39062.1| (mitochondrial glyco protein [Plasmopara halstedii]) HSP 1 Score: 91.2781 bits (225), Expect = 2.023e-18 Identity = 70/206 (33.98%), Postives = 107/206 (51.94%), Query Frame = 0 Query: 83 AALEDLLARELQEEKDLMESEERAPELEDVSEKIHKRFHIKESPGSSIIKMHTKHNTEKIMVQYDVQDTTE---------------DELDPQELEDEKAEDYTVGIRGVVTIAKAHHKLMFSVVFTNTVWVEKVALDSD-GREWNDETLYWS-DFSEYPEDVQEAFTRHLAARNIDDELAVFVSYFAFEKEKEHYLTFLERATEFV 271 ++L LL RE++EEK E PELED+ K+ K F I+E+PG + + ++ I ++++ QDT E + + +DE+ D G+R I + + L F V ++ + VE++ D +E DET Y+ +F + DVQ+ F +LA RNIDD LA F++ FA KE+ YL FLE A FV Sbjct: 28 SSLASLLQREIREEKGNSLEE---PELEDLRSKVEKLFKIQETPGCMDVVLQGSVGSDSIKIKFNAQDTVELDEEEDYDDEDEDHGNVEVVDDGDDEEEADELPGVRFTADIMRDNKGLQFDCVASSNLTVERLRYFKDFAKEDEDETRYFGPEFIDLELDVQDNFYSYLADRNIDDALAQFITQFADLKEQREYLAFLEDAETFV 230
BLAST of EWM21511.1 vs. NCBI_GenBank
Match: gi|673014632|ref|XP_008861277.1| (hypothetical protein H310_00318 [Aphanomyces invadans] >gi|574482875|gb|ETW09866.1| hypothetical protein H310_00318 [Aphanomyces invadans]) HSP 1 Score: 90.5077 bits (223), Expect = 3.334e-18 Identity = 69/201 (34.33%), Postives = 103/201 (51.24%), Query Frame = 0 Query: 82 SAALEDLLARELQEEKDLMESEERAPELEDVSEKIHKRFHIKESPGSSIIKMHTKHNTEKIMVQYDVQDTTE---------DELDPQELEDEKAEDYTVGIRGVVTIAKAHHKLMFSVVFTNTVWVEKVALDSDGREWNDETLYWSDFSEYPEDVQEAFTRHLAARNIDDELAVFVSYFAFEKEKEHYLTFLERATEFVGA 273 S+AL LL REL EEK E ELE + EK+ F I+++PG+ I + KH E+I ++++ QD + D E E +D IR I K + L+F V ++ + VE V + D F++ EDVQEAF +L R+I+D+LA F++ FA KE++ Y+TFLE +F+ A Sbjct: 23 SSALPSLLGRELAEEKANCFVGE---ELESLREKVLANFKIQDTPGNLDIVLLRKHKNEQIDIKFNCQDVANVAEDGGEYDEGDDEDSEEGEYDDDVLPCIRFTARIVKDNSALIFDCVASSVLTVEGVMHTETADDLKDSDYEGPRFADLEEDVQEAFANYLDERHINDDLANFITQFADLKEQKEYVTFLENTQKFIEA 220
BLAST of EWM21511.1 vs. NCBI_GenBank
Match: gi|695369742|ref|XP_009514132.1| (hypothetical protein PHYSODRAFT_538644 [Phytophthora sojae] >gi|348687043|gb|EGZ26857.1| hypothetical protein PHYSODRAFT_538644 [Phytophthora sojae]) HSP 1 Score: 90.1225 bits (222), Expect = 6.200e-18 Identity = 71/206 (34.47%), Postives = 107/206 (51.94%), Query Frame = 0 Query: 83 AALEDLLARELQEEKDLMESEERAPELEDVSEKIHKRFHIKESPGSSIIKMHTKHNTEKIMVQYDVQDTTEDELDPQELEDEKAEDYTV---------------GIRGVVTIAKAHHKLMFSVVFTNTVWVEKVALDSD-GREWNDETLYWS-DFSEYPEDVQEAFTRHLAARNIDDELAVFVSYFAFEKEKEHYLTFLERATEFV 271 ++L +L REL EEK E PE+E++ K+ F ++E+PG I ++ + I ++++ QDT E E D + +D E+ G+R I + + L F V ++ V VE+V +D +E DETLY+ +F + DVQ+ F R+LA R IDDELA F++ FA KE+ Y FLE A FV Sbjct: 31 SSLASVLKRELDEEKANCFEE---PEMEELRLKVESVFKLQETPGCMDIVLNGTMGDDSIKIKFNAQDTVELEDDEEYGDDYDEEEEQQEVDEEEDEEEEDELPGVRFTADITRDNQGLQFDCVASSNVTVERVRYLADFAKEAEDETLYFGPNFIDLELDVQDHFYRYLADRKIDDELAQFITQFADLKEQREYTAFLEDAETFV 233
BLAST of EWM21511.1 vs. NCBI_GenBank
Match: gi|1173951417|gb|OQR99306.1| (hypothetical protein ACHHYP_07104 [Achlya hypogyna]) HSP 1 Score: 88.1965 bits (217), Expect = 2.514e-17 Identity = 66/201 (32.84%), Postives = 102/201 (50.75%), Query Frame = 0 Query: 84 ALEDLLARELQEEKDLMESEERAPELEDVSEKIHKRFHIKESPGSSIIKMHTKHNTEKIMVQYDVQDTTEDELDPQELEDEKAEDYTV----------GIRGVVTIAKAHHKLMFSVVFTNTVWVEKVA-LDSDGREWNDETLYWSDFSEYPEDVQEAFTRHLAARNIDDELAVFVSYFAFEKEKEHYLTFLERATEFVGA 273 AL LL REL EEK E ELE + EK+ K F I ++PG+ + + KH E I + ++VQD E E + E+ + ED IR I K + L+F V ++ + ++ V L+ + E ++ + F + DVQEAF +L R+I+D+LA F+ +A KE++ Y+ FLE +F A Sbjct: 26 ALSSLLGRELAEEKANCFVGE---ELETLREKVLKNFKISDTPGNVGVTLRAKHANETIDINFNVQDVAEPEAGEYDDEEAEEEDAEYEGDEEDDVLPNIRFTARIVKNNQALIFDCVASSILTIDSVMHLEENADEVDNSVYHGPRFIDLENDVQEAFADYLNERHINDDLANFIMEYADLKEQKEYVAFLENVQKFTEA 223
BLAST of EWM21511.1 vs. NCBI_GenBank
Match: gi|813118033|ref|XP_012195828.1| (hypothetical protein SPRG_01872 [Saprolegnia parasitica CBS 223.65] >gi|641539248|gb|KDO33057.1| hypothetical protein SPRG_01872 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 87.4261 bits (215), Expect = 4.530e-17 Identity = 67/201 (33.33%), Postives = 105/201 (52.24%), Query Frame = 0 Query: 82 SAALEDLLARELQEEKDLMESEERAPELEDVSEKIHKRFHIKESPGSSIIKMHTKHNTEKIMVQYDVQDTTEDELDPQELED---------EKAEDYTVGIRGVVTIAKAHHKLMFSVVFTNTVWVEKVA-LDSDGREWNDETLYWSDFSEYPEDVQEAFTRHLAARNIDDELAVFVSYFAFEKEKEHYLTFLERATEFVG 272 S+ L LLAREL EEK E ELE + EK+ K F I ++PG+ I + +K E I + ++VQD E E E E+ ++ +D IR I K + L+F V ++ + ++ V L+ + E ++ + F + DVQEAF +L R+I+D+LA F+ +A KE++ Y+TFLE +F Sbjct: 21 SSDLSSLLARELAEEKANCFVGE---ELETLREKVLKHFKITDTPGNVGITLKSKTANEIIDINFNVQDVAEPEAGEYEDEEEEAEGDYEGDEEDDVLPSIRFTARIVKNNEALIFDCVASSILTIDSVMHLEENADEVDNSAYHGPRFIDLENDVQEAFADYLNERHINDDLANFIMEYADLKEQKEYVTFLENVQKFTA 218
BLAST of EWM21511.1 vs. NCBI_GenBank
Match: gi|669153578|ref|XP_008612351.1| (hypothetical protein SDRG_08253 [Saprolegnia diclina VS20] >gi|669153580|ref|XP_008612352.1| hypothetical protein SDRG_08254 [Saprolegnia diclina VS20] >gi|530735797|gb|EQC34039.1| hypothetical protein SDRG_08253 [Saprolegnia diclina VS20] >gi|530735798|gb|EQC34040.1| hypothetical protein SDRG_08254 [Saprolegnia diclina VS20]) HSP 1 Score: 87.4261 bits (215), Expect = 5.073e-17 Identity = 67/201 (33.33%), Postives = 105/201 (52.24%), Query Frame = 0 Query: 82 SAALEDLLARELQEEKDLMESEERAPELEDVSEKIHKRFHIKESPGSSIIKMHTKHNTEKIMVQYDVQDTTEDELDPQELED---------EKAEDYTVGIRGVVTIAKAHHKLMFSVVFTNTVWVEKVA-LDSDGREWNDETLYWSDFSEYPEDVQEAFTRHLAARNIDDELAVFVSYFAFEKEKEHYLTFLERATEFVG 272 S+ L LLAREL EEK E ELE + EK+ K F I ++PG+ I + +K E I + ++VQD E E E E+ ++ +D IR I K + L+F V ++ + ++ V L+ + E ++ + F + DVQEAF +L R+I+D+LA F+ +A KE++ Y+TFLE +F Sbjct: 21 SSDLSSLLARELAEEKANCFVGE---ELETLREKVLKHFKITDTPGNVGITLKSKTANEIIDINFNVQDVAEPEAGEYEDEEEEAEGDYEGDEEDDVLPSIRFTARIVKNNEALIFDCVASSILTIDSVMHLEENADEVDNSAYHGPRFIDLENDVQEAFADYLNDRHINDDLANFIMEYADLKEQKEYVTFLENVQKFTA 218 The following BLAST results are available for this feature:
BLAST of EWM21511.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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